GR421072

EST Overview
NameGR421072
Unique NameGR421072
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length747
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR421072 vs. SwissProt
Match: GOGC4_ARATH (Golgin candidate 4 OS=Arabidopsis thaliana GN=GC4 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.486e-35
Identity = 97/201 (48.26%), Postives = 122/201 (60.70%), Query Frame = -3
Query:   38 MWSTIANLKENLNKIALDVHYADDDED-DIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQE 610
            MWS++ANLKENLNKIA DVH  D+D+D D+ +   T     N  TD     G        + RSP +NG  + P   EIE+Y+AEI +LQ SE+EIKALSVNYAALLKEKED I RLN+ENGSLKQNL +T+ A          ++ N+ +KG+ D S N+  R  T  KNRN+ N+    K      NGT N   S K+E
Sbjct:    1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGST-----NGGTDRRNSNGF------RYSRSPMANGF-ESPVNPEIERYKAEINKLQKSESEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAALKESRLDLSRASNNNAIKGNGDHSPNRSQRSPTNWKNRNQMNNGIASK-----PNGTENDSESHKKE 184          
BLAST of GR421072 vs. SwissProt
Match: GOGC3_ARATH (Golgin candidate 3 OS=Arabidopsis thaliana GN=GC3 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.178e-31
Identity = 80/176 (45.45%), Postives = 111/176 (63.07%), Query Frame = -3
Query:  110 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNH 610
            MWS+I N+K NL+KI LDVH  D++EDD+        V  +   + S    V   SIS+   SPA +         EIE+Y+AEIK+LQ SE++IKALSVNYAALL+EKED I RLN+ENGSLKQNL +TS A           + N+ +KG++DQS N+ ++  + +K+ N  ++
Sbjct:    1 MWSSIENMKANLHKIVLDVHEDDEEEDDLHKYGSANGVSNSDRRNSSGFRSVSRYSISNGIESPAHH---------EIERYKAEIKKLQESESDIKALSVNYAALLREKEDQISRLNQENGSLKQNLTSTSAALKEARTDISRGSNNYAIKGNNDQSPNRLHKSVSHLKSPNHMSN 167          
BLAST of GR421072 vs. TrEMBL
Match: D7UCI0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027009001 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.514e-35
Identity = 93/182 (51.10%), Postives = 119/182 (65.38%), Query Frame = -3
Query:   98 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEAT-----------SPASSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFG 610
            MWSTIANLKENLNKIALDVH  DDD++++ + +P      +PS           +   SH +   SNGI D  Y SEIEQY+AEIKRLQ SE EIKALS+NYAALLK+KED I +L+KENGSLK NL++T           S  S+N  H +KGS DQS ++ ++ T Q+K R+  N ++ G
Sbjct:    1 MWSTIANLKENLNKIALDVH--DDDDEELQIHAPVVAA-EDPSVS---------DRRFSH-KYAHSNGI-DSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHNLDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNG 168          
BLAST of GR421072 vs. TrEMBL
Match: B9RDZ2_RICCO (Structural maintenance of chromosome 1 protein, putative OS=Ricinus communis GN=RCOM_1616980 PE=4 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.674e-34
Identity = 100/216 (46.30%), Postives = 127/216 (58.80%), Query Frame = -3
Query:   20 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHP--------RSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATS-----------PASSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQEGAIKDV 610
            MWS+I  LK+NLNKIALDVH  D DE+++ + +             S+  G   +  +SH         RSP +NGI D  + SEIEQY+AEI+RLQ SE+EIKALSVNYAALLKEKED I RLN+ENGSLK NL+AT             AS+N  H +KG+ DQS NQ ++  TQ K+RN  N +          NG  +     KQEG + D+
Sbjct:    1 MWSSIEALKQNLNKIALDVH-DDGDEEELEIYA-------------SINDGDYSDRRNSHSFAHSKPALRSPIANGI-DSSFHSEIEQYKAEIRRLQESESEIKALSVNYAALLKEKEDQISRLNQENGSLKHNLDATEEALNVSRSENPKASTNNTHVIKGAVDQSPNQQHKSATQAKSRNVGNQMQ---------NGVFS-----KQEGELADL 187          
BLAST of GR421072 vs. TrEMBL
Match: D7LDX1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483764 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.047e-32
Identity = 94/207 (45.41%), Postives = 122/207 (58.94%), Query Frame = -3
Query:   20 MWSTIANLKENLNKIALDVHYADDDED-DIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQEGAIKDV 610
            MWS++ANLKENLNKIA DVH  D+D+D D+ +   T     N   D     G        + RSP +NG+ + P   EIE+Y+AEI +LQ SE EIKALSVNYAALLKEKED I RLN+ENGSLKQNL +T+ A          ++ N+ +KG+ D S N+  +  T  K+RN+  +    K      NGT N   S K+E    D+
Sbjct:    1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGST-----NGGADRRNSNGF------RYSRSPMANGV-ESPVNHEIERYKAEINKLQESEAEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAAPKESRMDLSRASNNNAIKGNGDHSPNRSQKSPTNWKSRNQMYNGIASK-----QNGTENDSESHKKEKEFADM 190          
BLAST of GR421072 vs. TrEMBL
Match: B9I8Q9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823997 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.733e-31
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = -3
Query:   83 IMWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA--SSNGNHK------VKGSSDQSSNQHNRFTTQMKNR--NERNHVYFGK*DPM 613
            +MWS+IANLK+NL KIALDVH   DD++D+ + + T     + S   +        S+S    SP +NG  D PY  EIEQY+A+IKR Q SE EIKALSVNYAA+LKEKED I RLN+ENGSLKQNL+ T  A   S   H+      +K S DQS  + +R  TQ KNR  N+  +  F K D M
Sbjct:    1 MMWSSIANLKQNLEKIALDVH---DDDEDLEIHASTNGYDSSVSDRRNSHRFAHSKSVSP---SPTANG-NDSPYNFEIEQYKAQIKRHQESEAEIKALSVNYAAILKEKEDQISRLNQENGSLKQNLDVTKEALNVSRNEHRRASTSSIKESGDQSPKRPHRPATQAKNRGGNQIQNRVFPKHDGM 180          
BLAST of GR421072 vs. TrEMBL
Match: B9GQE5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409585 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.267e-30
Identity = 86/173 (49.71%), Postives = 109/173 (63.01%), Query Frame = -3
Query:  125 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA-----------SSNGNHKVKGSSDQSSNQHNRFTTQMKNR 610
            MWS+I NLK NLNKIALDVH  DDDE+++ + + +       S   +        S+S   RS  +NG    PY  EIEQY+A+IKRLQ SE EIKALS+NYAA+LKEKED I RLN+ENGSLKQNL+AT  A           S++  + +KGS DQS  + ++   Q KNR
Sbjct:    1 MWSSIENLKLNLNKIALDVH--DDDEEELEIHASSNGYDSPVSDRRNSHRFAHSKSVS---RSLGANG-NGSPYNFEIEQYKAQIKRLQESEGEIKALSINYAAILKEKEDQISRLNQENGSLKQNLDATKEALNVSRTEHLRISTSSINAIKGSGDQSPKRPHKSANQAKNR 167          
BLAST of GR421072 vs. TrEMBL
Match: D7LSB4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907697 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.613e-29
Identity = 85/181 (46.96%), Postives = 106/181 (58.56%), Query Frame = -3
Query:   95 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK 610
            MWS+I N KENL+KIALDVH  DD+EDD+        V  +     S              RS  SNGI + P   EIE+Y+AEIK+LQ SE +IKALSVNYAALL+EKED I RLN++NGSLKQ L +TS A           + N+ +KG++DQS N  NR    +      NH+  GK
Sbjct:    1 MWSSIENFKENLHKIALDVHEDDDEEDDLQSYGYANGVSESDRRKSSGFRS---------SRSAISNGI-ESPAHHEIERYKAEIKKLQESEADIKALSVNYAALLREKEDQISRLNQDNGSLKQYLTSTSAALKEARTDISRGSNNYAIKGNNDQSPN--NRLHKSVSYLKSPNHMSNGK 169          
BLAST of GR421072 vs. TrEMBL
Match: C5YKM8_SORBI (Putative uncharacterized protein Sb07g019460 OS=Sorghum bicolor GN=Sb07g019460 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.313e-14
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = -3
Query:  161 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPASSNGNHKVKGSSDQSSN 610
            M S+IA  +E+L+++A +V  A  DE      +P AR       D+S      P S     R        +     EI + R +I++LQASE EIKALS NYAA+LKEKE+ + +L +ENGSLK+++E+    S+N N  ++ S     N
Sbjct:    1 MRSSIATYRESLSRLAGEVDDAAADEVPAPPLAPAAR-----GGDLSAT----PPSSGRRRRYSRPGPGPEAAEPDEISKLRVDIQKLQASEAEIKALSFNYAAMLKEKEEQLGKLREENGSLKRSMESCKAVSANSNGTLERSPRAQRN 141          
BLAST of GR421072 vs. TrEMBL
Match: B8BAC2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29089 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.801e-12
Identity = 54/161 (33.54%), Postives = 87/161 (54.04%), Query Frame = -3
Query:  137 MWSTIANLKENLNKIALDVHYADDDEDD---IVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPASSNGNHKVKGSSDQSSNQHNRFTTQ 610
            M  +IA  +E+L+++A +V  A  DE +       SP AR   + S      +G      +S   + A+      P    + + + +I++LQ SE EIKALS +Y A+LKEKE+ + +L +ENGSLK++LE++   S+N N    G+ ++S     R T Q
Sbjct:    1 MRGSIATYRESLSRLAGEVDDAAADEAEPQASAASSPPARGAADRSHTTPPSSGRRRRYSASASSAAAARPDPAEPDEVPVSKLKEDIQKLQVSEAEIKALSFSYVAMLKEKEEQLGKLREENGSLKRSLESSKAVSANSN----GALERSPRGVQRNTVQ 157          
BLAST of GR421072 vs. TAIR peptide
Match: AT2G46180.1 (| Symbols: GC4 | golgin candidate 4 | chr2:18967482-18971260 REVERSE LENGTH=725)

HSP 1 Score: 149.058 bits (375), Expect = 2.471e-36
Identity = 97/201 (48.26%), Postives = 122/201 (60.70%), Query Frame = -3
Query:   38 MWSTIANLKENLNKIALDVHYADDDED-DIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQE 610
            MWS++ANLKENLNKIA DVH  D+D+D D+ +   T     N  TD     G        + RSP +NG  + P   EIE+Y+AEI +LQ SE+EIKALSVNYAALLKEKED I RLN+ENGSLKQNL +T+ A          ++ N+ +KG+ D S N+  R  T  KNRN+ N+    K      NGT N   S K+E
Sbjct:    1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGST-----NGGTDRRNSNGF------RYSRSPMANGF-ESPVNPEIERYKAEINKLQKSESEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAALKESRLDLSRASNNNAIKGNGDHSPNRSQRSPTNWKNRNQMNNGIASK-----PNGTENDSESHKKE 184          
BLAST of GR421072 vs. TAIR peptide
Match: AT3G61570.1 (| Symbols: GC3, GDAP1 | GRIP-related ARF-binding domain-containing protein 1 | chr3:22779637-22783642 REVERSE LENGTH=712)

HSP 1 Score: 135.961 bits (341), Expect = 2.165e-32
Identity = 80/176 (45.45%), Postives = 111/176 (63.07%), Query Frame = -3
Query:  110 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNH 610
            MWS+I N+K NL+KI LDVH  D++EDD+        V  +   + S    V   SIS+   SPA +         EIE+Y+AEIK+LQ SE++IKALSVNYAALL+EKED I RLN+ENGSLKQNL +TS A           + N+ +KG++DQS N+ ++  + +K+ N  ++
Sbjct:    1 MWSSIENMKANLHKIVLDVHEDDEEEDDLHKYGSANGVSNSDRRNSSGFRSVSRYSISNGIESPAHH---------EIERYKAEIKKLQESESDIKALSVNYAALLREKEDQISRLNQENGSLKQNLTSTSAALKEARTDISRGSNNYAIKGNNDQSPNRLHKSVSHLKSPNHMSN 167          
The following BLAST results are available for this feature:
BLAST of GR421072 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
GOGC4_ARATH2.486e-3548.26Golgin candidate 4 OS=Arabidopsis thaliana GN=GC4 ... [more]
GOGC3_ARATH2.178e-3145.45Golgin candidate 3 OS=Arabidopsis thaliana GN=GC3 ... [more]
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BLAST of GR421072 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
D7UCI0_VITVI1.514e-3551.10Whole genome shotgun sequence of line PN40024, sca... [more]
B9RDZ2_RICCO1.674e-3446.30Structural maintenance of chromosome 1 protein, pu... [more]
D7LDX1_ARALY2.047e-3245.41Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9I8Q9_POPTR1.733e-3149.73Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GQE5_POPTR3.267e-3049.71Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7LSB4_ARALY3.613e-2946.96Putative uncharacterized protein OS=Arabidopsis ly... [more]
C5YKM8_SORBI7.313e-1437.33Putative uncharacterized protein Sb07g019460 OS=So... [more]
B8BAC2_ORYSI1.801e-1233.54Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR421072 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G46180.12.471e-3648.26| Symbols: GC4 | golgin candidate 4 | chr2:1896748... [more]
AT3G61570.12.165e-3245.45| Symbols: GC3, GDAP1 | GRIP-related ARF-binding d... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..11
score
NoneNo IPR availableSEGsegsegcoord: 8..16
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR421072 ID=GR421072; Name=GR421072; organism=Cicer arietinum; type=EST; length=747bp
CAAATTTGCTTTTTCCTTCTACGTCCTTAATAGCTCCTTCTTGTTTGAAT
GATTAGAAGTAGTTTATAGTACCATTGAATTCCATTGGATCTTACTTTCC
AAAGTAGACATGGTTCCGTTCATTACGGTTTTTCATTTGAGTTGTGAACC
TATTATGTTGATTAGATGACTGATCACTGCTTCCCTTGACTTTGTGATTG
CCATTTGAAGATGCAGGACTTGTAGCCTCTAAATTCTGTTTTAACGAGCC
ATTTTCTTTATTCAGTCTAATGATGTGATCCTCTTTTTCTTTCAATAGAG
CTGCATAATTAACTGATAGTGCTTTAATTTCGGTTTCAGATGCTTGAAGT
CTCTTGATTTCTGCTCTATATTGTTCTATCTCGGAAGCGTAAGGATGATC
TGTTATTCCGTTCGACGCCGGCGACCTAGGATGACTGGAGATCGAATTGG
GAAGAACTCCGGCAACCACGGAGACGTCGGTAGAGGGATTCCGTAGGACT
CTCGCCGTCGGCGAAGGTAAAACGATGTCGTCTTCATCGTCGTCAGCGTA
GTGAACATCGAGGGCGATTTTATTCAAGTTCTCCTTCAAATTAGCAATGG
TGCTCCACATGATTCAAATGCCCCAAACCAAATCGGCGAATCTATTGTTA
GAAGAGATTTATCAATTGTTGTTTGAATTGATGCACAACTGCAATTGCGT
TGATCTGAGATTCGGTGACGGATGCTCACGCGATCTCGATCTATCTT
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