GR421072
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR421072 vs. SwissProt
Match: GOGC4_ARATH (Golgin candidate 4 OS=Arabidopsis thaliana GN=GC4 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.486e-35 Identity = 97/201 (48.26%), Postives = 122/201 (60.70%), Query Frame = -3 Query: 38 MWSTIANLKENLNKIALDVHYADDDED-DIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQE 610 MWS++ANLKENLNKIA DVH D+D+D D+ + T N TD G + RSP +NG + P EIE+Y+AEI +LQ SE+EIKALSVNYAALLKEKED I RLN+ENGSLKQNL +T+ A ++ N+ +KG+ D S N+ R T KNRN+ N+ K NGT N S K+E Sbjct: 1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGST-----NGGTDRRNSNGF------RYSRSPMANGF-ESPVNPEIERYKAEINKLQKSESEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAALKESRLDLSRASNNNAIKGNGDHSPNRSQRSPTNWKNRNQMNNGIASK-----PNGTENDSESHKKE 184
BLAST of GR421072 vs. SwissProt
Match: GOGC3_ARATH (Golgin candidate 3 OS=Arabidopsis thaliana GN=GC3 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.178e-31 Identity = 80/176 (45.45%), Postives = 111/176 (63.07%), Query Frame = -3 Query: 110 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNH 610 MWS+I N+K NL+KI LDVH D++EDD+ V + + S V SIS+ SPA + EIE+Y+AEIK+LQ SE++IKALSVNYAALL+EKED I RLN+ENGSLKQNL +TS A + N+ +KG++DQS N+ ++ + +K+ N ++ Sbjct: 1 MWSSIENMKANLHKIVLDVHEDDEEEDDLHKYGSANGVSNSDRRNSSGFRSVSRYSISNGIESPAHH---------EIERYKAEIKKLQESESDIKALSVNYAALLREKEDQISRLNQENGSLKQNLTSTSAALKEARTDISRGSNNYAIKGNNDQSPNRLHKSVSHLKSPNHMSN 167
BLAST of GR421072 vs. TrEMBL
Match: D7UCI0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027009001 PE=4 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.514e-35 Identity = 93/182 (51.10%), Postives = 119/182 (65.38%), Query Frame = -3 Query: 98 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEAT-----------SPASSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFG 610 MWSTIANLKENLNKIALDVH DDD++++ + +P +PS + SH + SNGI D Y SEIEQY+AEIKRLQ SE EIKALS+NYAALLK+KED I +L+KENGSLK NL++T S S+N H +KGS DQS ++ ++ T Q+K R+ N ++ G Sbjct: 1 MWSTIANLKENLNKIALDVH--DDDDEELQIHAPVVAA-EDPSVS---------DRRFSH-KYAHSNGI-DSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHNLDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNG 168
BLAST of GR421072 vs. TrEMBL
Match: B9RDZ2_RICCO (Structural maintenance of chromosome 1 protein, putative OS=Ricinus communis GN=RCOM_1616980 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.674e-34 Identity = 100/216 (46.30%), Postives = 127/216 (58.80%), Query Frame = -3 Query: 20 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHP--------RSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATS-----------PASSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQEGAIKDV 610 MWS+I LK+NLNKIALDVH D DE+++ + + S+ G + +SH RSP +NGI D + SEIEQY+AEI+RLQ SE+EIKALSVNYAALLKEKED I RLN+ENGSLK NL+AT AS+N H +KG+ DQS NQ ++ TQ K+RN N + NG + KQEG + D+ Sbjct: 1 MWSSIEALKQNLNKIALDVH-DDGDEEELEIYA-------------SINDGDYSDRRNSHSFAHSKPALRSPIANGI-DSSFHSEIEQYKAEIRRLQESESEIKALSVNYAALLKEKEDQISRLNQENGSLKHNLDATEEALNVSRSENPKASTNNTHVIKGAVDQSPNQQHKSATQAKSRNVGNQMQ---------NGVFS-----KQEGELADL 187
BLAST of GR421072 vs. TrEMBL
Match: D7LDX1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483764 PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.047e-32 Identity = 94/207 (45.41%), Postives = 122/207 (58.94%), Query Frame = -3 Query: 20 MWSTIANLKENLNKIALDVHYADDDED-DIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQEGAIKDV 610 MWS++ANLKENLNKIA DVH D+D+D D+ + T N D G + RSP +NG+ + P EIE+Y+AEI +LQ SE EIKALSVNYAALLKEKED I RLN+ENGSLKQNL +T+ A ++ N+ +KG+ D S N+ + T K+RN+ + K NGT N S K+E D+ Sbjct: 1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGST-----NGGADRRNSNGF------RYSRSPMANGV-ESPVNHEIERYKAEINKLQESEAEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAAPKESRMDLSRASNNNAIKGNGDHSPNRSQKSPTNWKSRNQMYNGIASK-----QNGTENDSESHKKEKEFADM 190
BLAST of GR421072 vs. TrEMBL
Match: B9I8Q9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823997 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.733e-31 Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = -3 Query: 83 IMWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA--SSNGNHK------VKGSSDQSSNQHNRFTTQMKNR--NERNHVYFGK*DPM 613 +MWS+IANLK+NL KIALDVH DD++D+ + + T + S + S+S SP +NG D PY EIEQY+A+IKR Q SE EIKALSVNYAA+LKEKED I RLN+ENGSLKQNL+ T A S H+ +K S DQS + +R TQ KNR N+ + F K D M Sbjct: 1 MMWSSIANLKQNLEKIALDVH---DDDEDLEIHASTNGYDSSVSDRRNSHRFAHSKSVSP---SPTANG-NDSPYNFEIEQYKAQIKRHQESEAEIKALSVNYAAILKEKEDQISRLNQENGSLKQNLDVTKEALNVSRNEHRRASTSSIKESGDQSPKRPHRPATQAKNRGGNQIQNRVFPKHDGM 180
BLAST of GR421072 vs. TrEMBL
Match: B9GQE5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409585 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.267e-30 Identity = 86/173 (49.71%), Postives = 109/173 (63.01%), Query Frame = -3 Query: 125 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA-----------SSNGNHKVKGSSDQSSNQHNRFTTQMKNR 610 MWS+I NLK NLNKIALDVH DDDE+++ + + + S + S+S RS +NG PY EIEQY+A+IKRLQ SE EIKALS+NYAA+LKEKED I RLN+ENGSLKQNL+AT A S++ + +KGS DQS + ++ Q KNR Sbjct: 1 MWSSIENLKLNLNKIALDVH--DDDEEELEIHASSNGYDSPVSDRRNSHRFAHSKSVS---RSLGANG-NGSPYNFEIEQYKAQIKRLQESEGEIKALSINYAAILKEKEDQISRLNQENGSLKQNLDATKEALNVSRTEHLRISTSSINAIKGSGDQSPKRPHKSANQAKNR 167
BLAST of GR421072 vs. TrEMBL
Match: D7LSB4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907697 PE=4 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.613e-29 Identity = 85/181 (46.96%), Postives = 106/181 (58.56%), Query Frame = -3 Query: 95 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK 610 MWS+I N KENL+KIALDVH DD+EDD+ V + S RS SNGI + P EIE+Y+AEIK+LQ SE +IKALSVNYAALL+EKED I RLN++NGSLKQ L +TS A + N+ +KG++DQS N NR + NH+ GK Sbjct: 1 MWSSIENFKENLHKIALDVHEDDDEEDDLQSYGYANGVSESDRRKSSGFRS---------SRSAISNGI-ESPAHHEIERYKAEIKKLQESEADIKALSVNYAALLREKEDQISRLNQDNGSLKQYLTSTSAALKEARTDISRGSNNYAIKGNNDQSPN--NRLHKSVSYLKSPNHMSNGK 169
BLAST of GR421072 vs. TrEMBL
Match: C5YKM8_SORBI (Putative uncharacterized protein Sb07g019460 OS=Sorghum bicolor GN=Sb07g019460 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.313e-14 Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = -3 Query: 161 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPASSNGNHKVKGSSDQSSN 610 M S+IA +E+L+++A +V A DE +P AR D+S P S R + EI + R +I++LQASE EIKALS NYAA+LKEKE+ + +L +ENGSLK+++E+ S+N N ++ S N Sbjct: 1 MRSSIATYRESLSRLAGEVDDAAADEVPAPPLAPAAR-----GGDLSAT----PPSSGRRRRYSRPGPGPEAAEPDEISKLRVDIQKLQASEAEIKALSFNYAAMLKEKEEQLGKLREENGSLKRSMESCKAVSANSNGTLERSPRAQRN 141
BLAST of GR421072 vs. TrEMBL
Match: B8BAC2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29089 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.801e-12 Identity = 54/161 (33.54%), Postives = 87/161 (54.04%), Query Frame = -3 Query: 137 MWSTIANLKENLNKIALDVHYADDDEDD---IVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPASSNGNHKVKGSSDQSSNQHNRFTTQ 610 M +IA +E+L+++A +V A DE + SP AR + S +G +S + A+ P + + + +I++LQ SE EIKALS +Y A+LKEKE+ + +L +ENGSLK++LE++ S+N N G+ ++S R T Q Sbjct: 1 MRGSIATYRESLSRLAGEVDDAAADEAEPQASAASSPPARGAADRSHTTPPSSGRRRRYSASASSAAAARPDPAEPDEVPVSKLKEDIQKLQVSEAEIKALSFSYVAMLKEKEEQLGKLREENGSLKRSLESSKAVSANSN----GALERSPRGVQRNTVQ 157
BLAST of GR421072 vs. TAIR peptide
Match: AT2G46180.1 (| Symbols: GC4 | golgin candidate 4 | chr2:18967482-18971260 REVERSE LENGTH=725) HSP 1 Score: 149.058 bits (375), Expect = 2.471e-36 Identity = 97/201 (48.26%), Postives = 122/201 (60.70%), Query Frame = -3 Query: 38 MWSTIANLKENLNKIALDVHYADDDED-DIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNHVYFGK*DPMEFNGTINYF*SFKQE 610 MWS++ANLKENLNKIA DVH D+D+D D+ + T N TD G + RSP +NG + P EIE+Y+AEI +LQ SE+EIKALSVNYAALLKEKED I RLN+ENGSLKQNL +T+ A ++ N+ +KG+ D S N+ R T KNRN+ N+ K NGT N S K+E Sbjct: 1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGST-----NGGTDRRNSNGF------RYSRSPMANGF-ESPVNPEIERYKAEINKLQKSESEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAALKESRLDLSRASNNNAIKGNGDHSPNRSQRSPTNWKNRNQMNNGIASK-----PNGTENDSESHKKE 184
BLAST of GR421072 vs. TAIR peptide
Match: AT3G61570.1 (| Symbols: GC3, GDAP1 | GRIP-related ARF-binding domain-containing protein 1 | chr3:22779637-22783642 REVERSE LENGTH=712) HSP 1 Score: 135.961 bits (341), Expect = 2.165e-32 Identity = 80/176 (45.45%), Postives = 111/176 (63.07%), Query Frame = -3 Query: 110 MWSTIANLKENLNKIALDVHYADDDEDDIVLPSPTARVLRNPSTDVSVVAGVLPNSISSHPRSPASNGITDHPYASEIEQYRAEIKRLQASETEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSPA---------SSNGNHKVKGSSDQSSNQHNRFTTQMKNRNERNH 610 MWS+I N+K NL+KI LDVH D++EDD+ V + + S V SIS+ SPA + EIE+Y+AEIK+LQ SE++IKALSVNYAALL+EKED I RLN+ENGSLKQNL +TS A + N+ +KG++DQS N+ ++ + +K+ N ++ Sbjct: 1 MWSSIENMKANLHKIVLDVHEDDEEEDDLHKYGSANGVSNSDRRNSSGFRSVSRYSISNGIESPAHH---------EIERYKAEIKKLQESESDIKALSVNYAALLREKEDQISRLNQENGSLKQNLTSTSAALKEARTDISRGSNNYAIKGNNDQSPNRLHKSVSHLKSPNHMSN 167 The following BLAST results are available for this feature:
BLAST of GR421072 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of GR421072 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 8
BLAST of GR421072 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR421072 ID=GR421072; Name=GR421072; organism=Cicer arietinum; type=EST; length=747bpback to top |