GR912819

EST Overview


Name	GR912819
Unique Name	GR912819
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	321

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR912819 vs. TrEMBL
Match: Q8LPJ1_ARATH (Casein kinase 1-like protein 6 OS=Arabidopsis thaliana GN=CKL6 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.000e-9
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1

Query:   28 QRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            ++PE+ISVG  +R++F+GAVEAF+RRN    SP   H +HR+ +++ +M        EKGRN +RYG
Sbjct:  328 EKPERISVGN-IRDKFSGAVEAFARRNVRGPSPHQNHTRHRTLDEIPSMKPAVNMVSEKGRNTSRYG 393

[Close]

BLAST of GR912819 vs. TrEMBL
Match: Q8LFV8_ARATH (Protein kinase ADK1-like protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.000e-9
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1

Query:   28 QRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            ++PE+ISVG  +R++F+GAVEAF+RRN    SP   H +HR+ +++ +M        EKGRN +RYG
Sbjct:  324 EKPERISVGN-IRDKFSGAVEAFARRNVRGPSPHQNHTRHRTLDEIPSMKPAVNMVSEKGRNTSRYG 389

[Close]

BLAST of GR912819 vs. TrEMBL
Match: D7MDB3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491910 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.000e-9
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1

Query:   28 QRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            ++PE+ISVG  +R++F+GAVEAF+RRN    SP   H +HR+ +++ +M        EKGRN +RYG
Sbjct:  324 EKPERISVGN-IRDKFSGAVEAFARRNVRGPSPHQNHTRHRTLDEIPSMKPAVNMVSEKGRNTSRYG 389

[Close]

BLAST of GR912819 vs. TrEMBL
Match: B9SS69_RICCO (Casein kinase, putative OS=Ricinus communis GN=RCOM_1169490 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.693e-8
Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 1

Query:   13 PPGQVQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            P    +R E+ SVG+E+R+RF+GAVEAF+RRN +  +   +H++HRS +DV +  KD + D E+ R+ +R G
Sbjct:  314 PGPSAERTERPSVGQEIRDRFSGAVEAFARRNGSGHALHGDHSRHRSSDDVPS-SKDVHLDSERPRSSSRNG 384

[Close]

BLAST of GR912819 vs. TrEMBL
Match: D7KD95_ARALY (Predicted protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_677992 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.772e-8
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1

Query:   25 VQRPEKISVGKELRE-RFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            +++PE+I+ GKE RE RF+GAVEAFSRR+PTTS+PR   A   S +   + H  G  D E+ R+ +RYG
Sbjct:  165 LEKPERIA-GKETRENRFSGAVEAFSRRHPTTSTPRDRSASRNSDDGPLSKHPPG--DSERPRSSSRYG 230

[Close]

BLAST of GR912819 vs. TrEMBL
Match: D7SZI3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027835001 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.434e-8
Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 1

Query:   13 PPGQVQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            P    +R E+ SVG+E+R+RF+GAVEAFSRRN + S    + ++HR  EDV +  KD   D E+ R+ +R G
Sbjct:  315 PGPSAERMERPSVGQEIRDRFSGAVEAFSRRNNSGSGYHGDQSRHRGSEDVPS-SKDVQTDSERPRSSSRNG 385

[Close]

BLAST of GR912819 vs. TrEMBL
Match: C5WYG7_SORBI (Putative uncharacterized protein Sb01g019390 OS=Sorghum bicolor GN=Sb01g019390 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.403e-8
Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 1

Query:   25 VQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGY-HDQEKGRNLTRYG 228
            V+R +K SVG+E+RERFTGAVEAF+RRNP  S    +H++H+S  D      +    D EK R L+R G
Sbjct:  319 VERTDKASVGQEIRERFTGAVEAFARRNP-GSGRHGDHSRHKSLADSFGTSNEAVAADSEKTRILSRGG 386

[Close]

BLAST of GR912819 vs. TrEMBL
Match: Q7XDE4_ORYSJ (Casein kinase I, epsilon isoform, putative, expressed OS=Oryza sativa subsp. japonica GN=Os10g0476300 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 1.097e-7
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 1

Query:   25 VQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTR 222
            V RP+K SVG+E+R+RFTGAVEAF+RRNP  S    ++++H+S  D      +   D E+ R ++R
Sbjct:  319 VDRPDKTSVGQEIRDRFTGAVEAFARRNP-GSGRLGDNSRHKSLADSFGSSTEAVVDSERTRTISR 383

[Close]

BLAST of GR912819 vs. TrEMBL
Match: B9G686_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31880 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.097e-7
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 1

Query:   25 VQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTR 222
            V RP+K SVG+E+R+RFTGAVEAF+RRNP  S    ++++H+S  D      +   D E+ R ++R
Sbjct:  319 VDRPDKTSVGQEIRDRFTGAVEAFARRNP-GSGRLGDNSRHKSLADSFGSSTEAVVDSERTRTISR 383

[Close]

BLAST of GR912819 vs. TrEMBL
Match: Q39050_ARATH (AT4g14340/dl3210c OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.291e-7
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 1

Query:   13 PPGQ-VQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTR 222
            PPG   +R EK +VG++LR RFTGA+EAF+RRN ++     + ++HRS +D+ +  K+  H+   G    R
Sbjct:  320 PPGPPAERAEKPTVGQDLRGRFTGAIEAFTRRNVSSQGALGDRSRHRSSDDIPSSAKE-VHESRNGSTSKR 389

[Close]

BLAST of GR912819 vs. TAIR peptide
Match: AT4G28540.1 (| Symbols: CKL6, PAPK1 | casein kinase I-like 6 | chr4:14107284-14110511 FORWARD LENGTH=479)

HSP 1 Score: 65.4698 bits (158), Expect = 7.951e-12
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1

Query:   28 QRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            ++PE+ISVG  +R++F+GAVEAF+RRN    SP   H +HR+ +++ +M        EKGRN +RYG
Sbjct:  328 EKPERISVGN-IRDKFSGAVEAFARRNVRGPSPHQNHTRHRTLDEIPSMKPAVNMVSEKGRNTSRYG 393

[Close]

BLAST of GR912819 vs. TAIR peptide
Match: AT4G14340.1 (| Symbols: CKI1, CKL11 | casein kinase I | chr4:8248532-8251668 REVERSE LENGTH=457)

HSP 1 Score: 56.6102 bits (135), Expect = 3.693e-9
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 1

Query:   13 PPGQ-VQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTR 222
            PPG   +R EK +VG++LR RFTGA+EAF+RRN ++     + ++HRS +D+ +  K+  H+   G    R
Sbjct:  320 PPGPPAERAEKPTVGQDLRGRFTGAIEAFTRRNVSSQGALGDRSRHRSSDDIPSSAKE-VHESRNGSTSKR 389

[Close]

BLAST of GR912819 vs. TAIR peptide
Match: AT1G03930.1 (| Symbols: ADK1, CKL9ALPHA, CKL9BETA | dual specificity kinase 1 | chr1:1005439-1008118 FORWARD LENGTH=471)

HSP 1 Score: 53.9138 bits (128), Expect = 2.394e-8
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1

Query:   25 VQRPEKISVGKELRE-RFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYG 228
            +++ E+I+ GKE RE RF+GAVEAFSRR+P TS+ R   A   S +   + H  G  D E+ R+ +RYG
Sbjct:  324 LEKQERIA-GKETRENRFSGAVEAFSRRHPATSTTRDRSASRNSVDGPLSKHPPG--DSERPRSSSRYG 389

The following BLAST results are available for this feature:

BLAST of GR912819 vs. TrEMBL
BLAST of GR912819 vs. TAIR peptide

BLAST of GR912819 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8LPJ1_ARATH	2.000e-9	46.27	Casein kinase 1-like protein 6 OS=Arabidopsis thal...	[more]
Q8LFV8_ARATH	2.000e-9	46.27	Protein kinase ADK1-like protein OS=Arabidopsis th...	[more]
D7MDB3_ARALY	2.000e-9	46.27	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9SS69_RICCO	1.693e-8	44.44	Casein kinase, putative OS=Ricinus communis GN=RCO...	[more]
D7KD95_ARALY	3.772e-8	50.72	Predicted protein (Fragment) OS=Arabidopsis lyrata...	[more]
D7SZI3_VITVI	6.434e-8	45.83	Whole genome shotgun sequence of line PN40024, sca...	[more]
C5WYG7_SORBI	8.403e-8	49.28	Putative uncharacterized protein Sb01g019390 OS=So...	[more]
Q7XDE4_ORYSJ	1.097e-7	45.45	Casein kinase I, epsilon isoform, putative, expres...	[more]
B9G686_ORYSJ	1.097e-7	45.45	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q39050_ARATH	9.291e-7	40.85	AT4g14340/dl3210c OS=Arabidopsis thaliana GN=CKI1 ...	[more]

BLAST of GR912819 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G28540.1	7.951e-12	46.27	\| Symbols: CKL6, PAPK1 \| casein kinase I-like 6 \| ...	[more]
AT4G14340.1	3.693e-9	40.85	\| Symbols: CKI1, CKL11 \| casein kinase I \| chr4:82...	[more]
AT1G03930.1	2.394e-8	46.38	\| Symbols: ADK1, CKL9ALPHA, CKL9BETA \| dual specif...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 77..93 score
None	No IPR available	SEG	seg	seg	coord: 3..16 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR912819 ID=GR912819; Name=GR912819; organism=Cicer arietinum; type=EST; length=321bp
GATTTCGAGCGGCCGCCCGGGCAGGTACAGAGGCCAGAAAAGATCTCAGT
TGGAAAAGAGCTTCGAGAGAGATTCACTGGTGCTGTTGAAGCATTCTCGC
GGAGGAACCCAACAACTTCTAGTCCTCGCGTTGAACACGCCAAGCATAGG
AGTTTTGAGGATGTCACTGCAATGCACAAGGATGGGTATCACGATCAAGA
GAAGGGACGCAATTTGACTCGATATGGAAGCAGTTCAAGAAGACCAATAA
TCTCATCATCGACCAGGCCAACTTCCTCAGGTGATCATACCGACACTCGT
ACCTCGGCCGCGACCACGCTA

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