HO062284

EST Overview


Name	HO062284
Unique Name	HO062284
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	708

Libraries


Library Name	Type
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of HO062284 vs. SwissProt
Match: PHF3_HUMAN (PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.316e-18
Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = -1

Query:   55 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVE 369
            +A++IE ELF  F   + KYK K RSL+FNLKD  N  L ++V+ G++ P+ L  M+ EELASKEL+ WR  +     +M+     +V+ R + + THKGE ++E
Sbjct:  958 VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIE 1062

[Close]

BLAST of HO062284 vs. SwissProt
Match: SPOC1_HUMAN (SPOC domain-containing protein 1 OS=Homo sapiens GN=SPOCD1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.062e-12
Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = -1

Query:   13 RESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRL--VRKTHKGEFQVEVEHEDNVPVAEVSG 456
            R  Q V+  +L       +  EVV   E +A+ IEA L+ L  G N +YK K RSLLFNL+D  N +L  +V+ G + P  L  M++ +LA +EL+ WR    EE   + ++     +  RL   + THKGE +++ + +  + + ++ G
Sbjct:  614 RSMQEVLWTRLRELPDPVLSEEVV---EGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELARWR--DQEEKRGLNIIEQQQKEPCRLPASKMTHKGEVEIQRDMDQTLTLEDLVG 758

[Close]

BLAST of HO062284 vs. SwissProt
Match: TCEA2_BOVIN (Transcription elongation factor A protein 2 OS=Bos taurus GN=TCEA2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.593e-12
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = -1

Query:  142 ELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEE 375
            E LA +IE  +F+  G  + KYK + RS L NLKD  NP LR +V+ G I P+Q+  MT+EE+AS EL E R A  +E
Sbjct:  165 ECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 242

[Close]

BLAST of HO062284 vs. SwissProt
Match: TCEA2_HUMAN (Transcription elongation factor A protein 2 OS=Homo sapiens GN=TCEA2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = -1

Query:  142 ELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEE 375
            E L+++IE  +F+  G  + KYK + RS + NLKD  NP+LR  V+ G I P+Q+  MT+EE+AS EL E R A  +E
Sbjct:  164 ERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 241

[Close]

BLAST of HO062284 vs. SwissProt
Match: TCEA2_RAT (Transcription elongation factor A protein 2 OS=Rattus norvegicus GN=Tcea2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.078e-11
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = -1

Query:  142 ELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEE 375
            E L+S+IE  +F   G  + KYK + RS + NLKD  NP LR  V+ G I P+Q+  MT+EE+AS EL E R A  +E
Sbjct:  164 EHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 241

[Close]

BLAST of HO062284 vs. SwissProt
Match: TCEA2_MOUSE (Transcription elongation factor A protein 2 OS=Mus musculus GN=Tcea2 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.078e-11
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = -1

Query:  142 ELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEE 375
            E L+S+IE  +F   G  + KYK + RS + NLKD  NP LR  V+ G I P+Q+  MT+EE+AS EL E R A  +E
Sbjct:  164 EHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 241

[Close]

BLAST of HO062284 vs. SwissProt
Match: BYE1_YARLI (Transcription factor BYE1 OS=Yarrowia lipolytica GN=BYE1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.078e-11
Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = -1

Query:   34 ELLASRIEAELFKLFGGVNKK----YKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEW-RIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNV 375
            E LA  IE EL+  +G V  +    Y++K R+L FNL+D  N  LR RVM G++ P+ L +M++EE+ + EL +     +AE +   V++    VD    +R+THKGE ++  E+E+ +
Sbjct:  235 ETLALTIEQELYDAYGTVEPEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAMSSEEMMNPELQKLAEEVRAEAIRDTVLV----VDEAPRLRRTHKGE-EIVGEYEEYI 348

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BLAST of HO062284 vs. SwissProt
Match: BYE1_YEAS7 (Transcription factor BYE1 OS=Saccharomyces cerevisiae (strain YJM789) GN=BYE1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.632e-11
Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = -1

Query:   55 REVVPLPELLASRIEAELFKL-----FGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQ--MVVLPDSDVDIRRLVRKTHKGEFQVE 396
            ++V+ + +  A  +E EL+K      FG ++K Y EK RSL  NLKD+ N EL+  V+ GK+   +L +M A ELA+ +L E++  + + + +  +V +PD  + +     KTHKG+  +E
Sbjct:  269 KDVISISQEFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDKVILENFIVEVPDKPMYV-----KTHKGDELIE 384

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BLAST of HO062284 vs. SwissProt
Match: BYE1_YEAST (Transcription factor BYE1 OS=Saccharomyces cerevisiae GN=BYE1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.662e-11
Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = -1

Query:   55 REVVPLPELLASRIEAELFKL-----FGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQ--MVVLPDSDVDIRRLVRKTHKGEFQVE 396
            ++V+ + +  A  +E EL+K      FG ++K Y EK RSL  NLKD+ N EL+  V+ GK+   +L +M A ELA+ +L E++  + + + +  +V +PD  + +     KTHKG+  +E
Sbjct:  269 KDVISISQEFAHNLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDKIILENFIVEVPDKPMYV-----KTHKGDELIE 384

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BLAST of HO062284 vs. SwissProt
Match: TCEA3_MOUSE (Transcription elongation factor A protein 3 OS=Mus musculus GN=Tcea3 PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 1.478e-10
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = -1

Query:  142 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEE 369
            LAS IE  +++     + KY+ + RS + NLKD  NP LR  V+ G I+PE +  MTAEE+AS EL E R A  +E
Sbjct:  214 LASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE 289

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BLAST of HO062284 vs. TrEMBL
Match: A5AN42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043189 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.477e-66
Identity = 130/190 (68.42%), Postives = 152/190 (80.00%), Query Frame = -1

Query:   28 DKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPV 597
            D+Q+FQ + +L   +  FSD+FFVKDELLQGNGLSW L    ++ + +E  T   + L+ +E     ++ V  P+ LA  IEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERV+ G+I+PE+LCSMTAEELASKELSEWRIAKAEELAQMVVLPDS+VDIRRLVRKTHKGEFQVE E +D   V
Sbjct:  332 DRQEFQLNTVLPDAESSFSDNFFVKDELLQGNGLSWALDLDTEVPEPKEISTAKNENLDGKEVVNEGQKTVQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSEVDIRRLVRKTHKGEFQVEFEQDDGASV 521

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BLAST of HO062284 vs. TrEMBL
Match: B9T1M3_RICCO (Transcription elongation factor s-II, putative OS=Ricinus communis GN=RCOM_0122480 PE=4 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.766e-66
Identity = 136/206 (66.02%), Postives = 163/206 (79.13%), Query Frame = -1

Query:   10 SNSEDILSSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCR-EVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGG 624
            SN+ D L   K D QS+  +  ++  FSD FFVKDELLQGNGLSWVL  ++ + + ++ +T  ++ L+ E++  V   + VP P+ +AS IEAEL+ LFGGVNKKYKEKGRSLLFNLKDRNNPELR RVM G+I PE+LCSMTAEELASKELSEWR+AKAEELAQMVVLPDSDVD+RRLV+KTHKGEFQVEVE  D V  AEV+ G
Sbjct:  309 SNAGDCLQPSKTDGQSTISMRDEETSFSDCFFVKDELLQGNGLSWVLEPVMGVAENKDIETT-KRPLDLEDSSHVSGGQAVPSPQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSMTAEELASKELSEWRMAKAEELAQMVVLPDSDVDMRRLVKKTHKGEFQVEVEPVDIVS-AEVAIG 512

[Close]

BLAST of HO062284 vs. TrEMBL
Match: B9H9P8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_654071 PE=4 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.841e-65
Identity = 138/208 (66.35%), Postives = 161/208 (77.40%), Query Frame = -1

Query:    7 NVSNSEDILSSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGGT 630
            N   S    + D Q  QSS I   +DV FSDSFFVKD+LLQGNGLSWVL     M +++E +T  E +   +       +++  P+ LAS IEAELFKLFGGVNKKYKEKGRSLLFNLKDR+NPELRE+VM G+I P +LCSMTAEELASKELSEWR+AKAEELAQMVVLPDSDVDIRRLV+KTHKGEFQVEVE +D+V + EV+ GT
Sbjct:  308 NAGYSTQTSNHDGQGLQSSVIFRDEDVSFSDSFFVKDDLLQGNGLSWVLEPDAGMAEKKEFETA-ETQQGQKHISKDIGKLIQDPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSMTAEELASKELSEWRMAKAEELAQMVVLPDSDVDIRRLVKKTHKGEFQVEVE-QDSVTM-EVAVGT 512

[Close]

BLAST of HO062284 vs. TrEMBL
Match: B9IKR4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_260862 PE=4 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.405e-64
Identity = 129/187 (68.98%), Postives = 150/187 (80.21%), Query Frame = -1

Query:   43 SSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHE 603
            ++D Q+  SS I   +D+ FSDSF VKDELLQGNGLSW+L    ++ +++E +       +      V +EVV  P +LAS IEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRE+VM G+I P +LCSMTAEELASKELSEWR+AKAEELAQMVVLPDSDVDIRRLV+KTHKGEFQVEVE +
Sbjct:  206 NNDGQELPSSNIFRDEDISFSDSFLVKDELLQGNGLSWILEPDAEIAEKKEIEAAQTPHGQEHIDEYVGKEVVRDPRVLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKVMSGEIPPGRLCSMTAEELASKELSEWRMAKAEELAQMVVLPDSDVDIRRLVKKTHKGEFQVEVEQD 392

[Close]

BLAST of HO062284 vs. TrEMBL
Match: D7SUI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035723001 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.559e-63
Identity = 138/213 (64.79%), Postives = 154/213 (72.30%), Query Frame = -1

Query:    7 ESGFPNVSNSEDILSSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGGT 645
            E   P  S S      D+Q+FQ + +L   +  FSD+FFVKDELLQGNGLSW L   +D E   E Q  ++                  P+ LA  IEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERV+ G+I+PE+LCSMTAEELASKELSEWRIAKAEELAQMVVLPDS+VDIRRLVRKTHKGEFQVE E +D   V EVS GT
Sbjct:  317 EDSEPAESASTANWKYDRQEFQLNTVLPDAESSFSDNFFVKDELLQGNGLSWALD--LDTEVVNEGQKTVQS-----------------PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSEVDIRRLVRKTHKGEFQVEFEQDDGASV-EVSVGT 509

[Close]

BLAST of HO062284 vs. TrEMBL
Match: Q8GYX6_ARATH (Putative PHD finger protein OS=Arabidopsis thaliana GN=At5g25520/T14C9_60 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.576e-58
Identity = 125/203 (61.58%), Postives = 146/203 (71.92%), Query Frame = -1

Query:    1 SDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPV---AEVSGGTCP 600
            SD Q  Q   +   DDV FSDS F  DELLQGNGLSWVL  + D   + E+Q   E                  PELLAS+IE ELFKLFGGVNKKYKEKGRSLLFNLKD+NNPELRE VM GKI+PE+LC+MTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE++  D+  V   AE++  + P
Sbjct:  304 SDVQKTQFDEVFPCDDVRFSDSIFTGDELLQGNGLSWVLEPVSDF-GENETQKSFED-----------------PELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAEMVVLRDTDIDVRNLVRKTHKGEFQVEIDPVDSGTVDVSAEITSNSKP 488

[Close]

BLAST of HO062284 vs. TrEMBL
Match: Q3E7G3_ARATH (Putative uncharacterized protein At5g25520.2 OS=Arabidopsis thaliana GN=At5g25520 PE=4 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.576e-58
Identity = 125/203 (61.58%), Postives = 146/203 (71.92%), Query Frame = -1

Query:    1 SDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPV---AEVSGGTCP 600
            SD Q  Q   +   DDV FSDS F  DELLQGNGLSWVL  + D   + E+Q   E                  PELLAS+IE ELFKLFGGVNKKYKEKGRSLLFNLKD+NNPELRE VM GKI+PE+LC+MTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE++  D+  V   AE++  + P
Sbjct:  304 SDVQKTQFDEVFPCDDVRFSDSIFTGDELLQGNGLSWVLEPVSDF-GENETQKSFED-----------------PELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAEMVVLRDTDIDVRNLVRKTHKGEFQVEIDPVDSGTVDVSAEITSNSKP 488

[Close]

BLAST of HO062284 vs. TrEMBL
Match: D7M401_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489410 PE=4 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.082e-56
Identity = 124/203 (61.08%), Postives = 144/203 (70.94%), Query Frame = -1

Query:    1 SDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPV---AEVSGGTCP 600
            SD Q  Q   +   DDV FSDS F  DELLQGNGLSWVL  + D   + E Q   E                  PELLAS+IE ELFKLF GVNKKYKEKGRSLLFNLKD+NNPELRE VM GKI+PE+LC+MTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE++  D+  V   AE++  + P
Sbjct:  298 SDVQKTQFDEVFPCDDVRFSDSIFSGDELLQGNGLSWVLEPVSDF-GENEPQKSFED-----------------PELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAEMVVLRDADIDVRNLVRKTHKGEFQVEIDPVDSGTVDVSAEITSHSKP 482

[Close]

BLAST of HO062284 vs. TrEMBL
Match: Q9LYE6_ARATH (Putative uncharacterized protein F15N18_20 OS=Arabidopsis thaliana GN=F15N18_20 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.910e-53
Identity = 121/225 (53.78%), Postives = 152/225 (67.56%), Query Frame = -1

Query:   10 SEKPKYYESGFPNVSN------SEDILSSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGG 666
            SE P   ES     S        ED++  +    Q   +   D+VPF+D  F  D+LL GN LSW L ++ D+ + ++  T  EK  +              P+LLAS+IE EL+KLFGGVNKKY+E+GRSLLFNLKD+NNPELRERVM  +I+ E+LCSMTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE+E  D   V +VSGG
Sbjct:  171 SEMPTSVESSVQKDSEIPVDIMMEDVIKFNVLKSQYDEVFPRDNVPFTDIIFPNDDLLHGNELSWDL-EVSDLGETKDYGTGGEKSFQD-------------PKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSMTAEELASKELSQWRQAKAEEMAKMVVLQDTDIDVRSLVRKTHKGEFQVEIEPVDRGTV-DVSGG 380

[Close]

BLAST of HO062284 vs. TrEMBL
Match: Q9SL99_ARATH (Putative transcription elongation factor S-II OS=Arabidopsis thaliana GN=At2g25640 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.617e-52
Identity = 115/198 (58.08%), Postives = 147/198 (74.24%), Query Frame = -1

Query:   10 SSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGG 603
            +SD Q  ++      D+V +SD+ F KD+LLQGN LSW L   ++     +++ +     +     G   +++  P++LA  IE ELFKLFGGVNKKYKEKGRSLLFNLKD++NP+LRE+VM+G+IA E+LCSM+AEELASKEL+EWR AKAEE+AQMVVL D++VDIR LVRKTHKGEFQVEVE  D+  V EVS G
Sbjct:  195 TSDAQVPEAVKPFVQDNVSYSDNVFSKDDLLQGNDLSWALESDIEFTVNCQNEMIGAMAND-----GSLEKLLLDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSMSAEELASKELAEWRQAKAEEMAQMVVLQDTEVDIRSLVRKTHKGEFQVEVEPMDSGSV-EVSVG 386

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT5G25520.2 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:8885550-8889484 FORWARD LENGTH=997)

HSP 1 Score: 229.18 bits (583), Expect = 1.747e-60
Identity = 125/203 (61.58%), Postives = 146/203 (71.92%), Query Frame = -1

Query:    1 SDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPV---AEVSGGTCP 600
            SD Q  Q   +   DDV FSDS F  DELLQGNGLSWVL  + D   + E+Q   E                  PELLAS+IE ELFKLFGGVNKKYKEKGRSLLFNLKD+NNPELRE VM GKI+PE+LC+MTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE++  D+  V   AE++  + P
Sbjct:  304 SDVQKTQFDEVFPCDDVRFSDSIFTGDELLQGNGLSWVLEPVSDF-GENETQKSFED-----------------PELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAEMVVLRDTDIDVRNLVRKTHKGEFQVEIDPVDSGTVDVSAEITSNSKP 488

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT5G25520.1 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:8885550-8888157 FORWARD LENGTH=735)

HSP 1 Score: 229.18 bits (583), Expect = 1.747e-60
Identity = 125/203 (61.58%), Postives = 146/203 (71.92%), Query Frame = -1

Query:    1 SDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPV---AEVSGGTCP 600
            SD Q  Q   +   DDV FSDS F  DELLQGNGLSWVL  + D   + E+Q   E                  PELLAS+IE ELFKLFGGVNKKYKEKGRSLLFNLKD+NNPELRE VM GKI+PE+LC+MTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE++  D+  V   AE++  + P
Sbjct:  304 SDVQKTQFDEVFPCDDVRFSDSIFTGDELLQGNGLSWVLEPVSDF-GENETQKSFED-----------------PELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAEMVVLRDTDIDVRNLVRKTHKGEFQVEIDPVDSGTVDVSAEITSNSKP 488

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT5G11430.1 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:3648469-3652256 FORWARD LENGTH=873)

HSP 1 Score: 213.001 bits (541), Expect = 1.295e-55
Identity = 121/225 (53.78%), Postives = 152/225 (67.56%), Query Frame = -1

Query:   10 SEKPKYYESGFPNVSN------SEDILSSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGG 666
            SE P   ES     S        ED++  +    Q   +   D+VPF+D  F  D+LL GN LSW L ++ D+ + ++  T  EK  +              P+LLAS+IE EL+KLFGGVNKKY+E+GRSLLFNLKD+NNPELRERVM  +I+ E+LCSMTAEELASKELS+WR AKAEE+A+MVVL D+D+D+R LVRKTHKGEFQVE+E  D   V +VSGG
Sbjct:  173 SEMPTSVESSVQKDSEIPVDIMMEDVIKFNVLKSQYDEVFPRDNVPFTDIIFPNDDLLHGNELSWDL-EVSDLGETKDYGTGGEKSFQD-------------PKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSMTAEELASKELSQWRQAKAEEMAKMVVLQDTDIDVRSLVRKTHKGEFQVEIEPVDRGTV-DVSGG 382

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT2G25640.1 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr2:10910836-10913908 FORWARD LENGTH=745)

HSP 1 Score: 209.92 bits (533), Expect = 1.097e-54
Identity = 115/198 (58.08%), Postives = 147/198 (74.24%), Query Frame = -1

Query:   10 SSDKQDFQSSYILTTDDVPFSDSFFVKDELLQGNGLSWVLSDIVDMEDQRESQTVIEKKLEPEEAGGVCREVVPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSEWRIAKAEELAQMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVAEVSGG 603
            +SD Q  ++      D+V +SD+ F KD+LLQGN LSW L   ++     +++ +     +     G   +++  P++LA  IE ELFKLFGGVNKKYKEKGRSLLFNLKD++NP+LRE+VM+G+IA E+LCSM+AEELASKEL+EWR AKAEE+AQMVVL D++VDIR LVRKTHKGEFQVEVE  D+  V EVS G
Sbjct:  246 TSDAQVPEAVKPFVQDNVSYSDNVFSKDDLLQGNDLSWALESDIEFTVNCQNEMIGAMAND-----GSLEKLLLDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSMSAEELASKELAEWRQAKAEEMAQMVVLQDTEVDIRSLVRKTHKGEFQVEVEPMDSGSV-EVSVG 437

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT2G38560.1 (| Symbols: TFIIS | transcript elongation factor IIS | chr2:16134802-16136319 FORWARD LENGTH=378)

HSP 1 Score: 61.2326 bits (147), Expect = 6.300e-10
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = -1

Query:  181 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELAS 378
            P  +A  +E+ +F+  G      K K RS++FNL+D NNP+LR RV+ G+I+PE+L +++AE++AS
Sbjct:  242 PLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMAS 307

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT2G42730.1 (| Symbols: | F-box family protein | chr2:17787454-17791218 REVERSE LENGTH=737)

HSP 1 Score: 57.7658 bits (138), Expect = 6.965e-9
Identity = 26/71 (36.62%), Postives = 47/71 (66.20%), Query Frame = -1

Query:  166 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELASKELSE 378
            P ++A  +E+ +F+  G     +K K RS+LFN+ D NNP+LR +V+ G+I  E+L +M  +E+ S+++ +
Sbjct:  639 PSVVAVSVESAMFEKLGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQK 709

[Close]

BLAST of HO062284 vs. TAIR peptide
Match: AT4G18720.1 (| Symbols: | Transcription factor IIS protein | chr4:10299945-10301228 FORWARD LENGTH=266)

HSP 1 Score: 54.6842 bits (130), Expect = 5.896e-8
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = -1

Query:  181 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIAPEQLCSMTAEELAS 378
            P ++A  +E  +F+  G      K K RS+LFN+ D NNP+LR +V+ G+I+ E+L  M  EE+ S
Sbjct:  150 PWVVAVSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGS 215

The following BLAST results are available for this feature:

BLAST of HO062284 vs. SwissProt
BLAST of HO062284 vs. TrEMBL
BLAST of HO062284 vs. TAIR peptide

BLAST of HO062284 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PHF3_HUMAN	7.316e-18	42.86	PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 ...	[more]
SPOC1_HUMAN	2.062e-12	33.33	SPOC domain-containing protein 1 OS=Homo sapiens G...	[more]
TCEA2_BOVIN	4.593e-12	48.72	Transcription elongation factor A protein 2 OS=Bos...	[more]
TCEA2_HUMAN	1.023e-11	46.15	Transcription elongation factor A protein 2 OS=Hom...	[more]
TCEA2_RAT	5.078e-11	47.44	Transcription elongation factor A protein 2 OS=Rat...	[more]
TCEA2_MOUSE	5.078e-11	47.44	Transcription elongation factor A protein 2 OS=Mus...	[more]
BYE1_YARLI	5.078e-11	36.97	Transcription factor BYE1 OS=Yarrowia lipolytica G...	[more]
BYE1_YEAS7	6.632e-11	34.71	Transcription factor BYE1 OS=Saccharomyces cerevis...	[more]
BYE1_YEAST	8.662e-11	34.71	Transcription factor BYE1 OS=Saccharomyces cerevis...	[more]
TCEA3_MOUSE	1.478e-10	46.05	Transcription elongation factor A protein 3 OS=Mus...	[more]

BLAST of HO062284 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A5AN42_VITVI	7.477e-66	68.42	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9T1M3_RICCO	9.766e-66	66.02	Transcription elongation factor s-II, putative OS=...	[more]
B9H9P8_POPTR	2.841e-65	66.35	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9IKR4_POPTR	2.405e-64	68.98	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7SUI4_VITVI	1.559e-63	64.79	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q8GYX6_ARATH	2.576e-58	61.58	Putative PHD finger protein OS=Arabidopsis thalian...	[more]
Q3E7G3_ARATH	2.576e-58	61.58	Putative uncharacterized protein At5g25520.2 OS=Ar...	[more]
D7M401_ARALY	1.082e-56	61.08	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9LYE6_ARATH	1.910e-53	53.78	Putative uncharacterized protein F15N18_20 OS=Arab...	[more]
Q9SL99_ARATH	1.617e-52	58.08	Putative transcription elongation factor S-II OS=A...	[more]

BLAST of HO062284 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT5G25520.2	1.747e-60	61.58	\| Symbols: \| SPOC domain / Transcription elongati...	[more]
AT5G25520.1	1.747e-60	61.58	\| Symbols: \| SPOC domain / Transcription elongati...	[more]
AT5G11430.1	1.295e-55	53.78	\| Symbols: \| SPOC domain / Transcription elongati...	[more]
AT2G25640.1	1.097e-54	58.08	\| Symbols: \| SPOC domain / Transcription elongati...	[more]
AT2G38560.1	6.300e-10	43.94	\| Symbols: TFIIS \| transcript elongation factor II...	[more]
AT2G42730.1	6.965e-9	36.62	\| Symbols: \| F-box family protein \| chr2:17787454...	[more]
AT4G18720.1	5.896e-8	40.91	\| Symbols: \| Transcription factor IIS protein \| c...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 11..21 score
None	No IPR available	PANTHER	PTHR11477	TRANSCRIPTION ELONGATION FACTOR S-II	coord: 99..208 score: 2.3
IPR003618	Transcription elongation factor S-II, central domain	GENE3D	1.10.472.30	no description	coord: 98..166 score: 1.2
IPR003618	Transcription elongation factor S-II, central domain	PFAM	PF07500	TFIIS_M	coord: 99..181 score: 7.6
IPR003618	Transcription elongation factor S-II, central domain	PROFILE	PS51321	TFIIS_CENTRAL	coord: 71..190 score: 29
IPR003618	Transcription elongation factor S-II, central domain	SUPERFAMILY	46942	Elongation factor TFIIS domain 2	coord: 99..166 score: 1.1
IPR017890	Transcription elongation factor S-IIM	SMART	SM00510	no description	coord: 70..173 score: 9

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO062284 ID=HO062284; Name=HO062284; organism=Cicer arietinum; type=EST; length=708bp
CGGGCAGGTACCACCAGACACCTCTGCCACTGGAACATTGTCTTCATGTT
CAACTTCTACTTGAAATTCACCTTTATGTGTTTTCCTGACTAGGCGTCTA
ATATCAACATCTGAATCAGGTAAAACCACCATTTGAGCAAGCTCCTCGGC
CTTGGCTATCCGCCACTCAGAAAGCTCCTTTGAAGCAAGTTCTTCTGCAG
TCATGGAACATAATTGTTCTGGAGCAATTTTACCAAACATAACCCTTTCT
CTGAGTTCAGGATTATTGCGATCTTTCAAGTTGAACAAAAGAGACCTTCC
CTTCTCTTTGTATTTCTTATTCACACCTCCAAACAGTTTGAAGAGCTCTG
CTTCTATCCTTGATGCTAAAAGTTCAGGTAAAGGGACCACTTCCCTACAA
ACTCCACCTGCTTCCTCGGGTTCCAATTTCTTCTCTATAACAGTTTGACT
TTCCCTTTGATCTTCCATGTCCACAATATCAGATAATACCCAGGACAGAC
CATTTCCCTGCAAAAGTTCATCTTTCACAAAGAAACTGTCACTGAAAGGA
ACATCATCAGTAGTCAAAATGTAGCTAGACTGGAAATCTTGCTTATCAGA
ACTCAGTATATCTTCACTGTTTGACACATTTGGGAATCCCGATTCATAAT
ACTTGGGTTTCTCAGAAAATCTTCACCAGATGTACCTCGGCCGCGACCAC
GCTAATCG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006350	transcription

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR003618	TFIIS_cen_dom
IPR017890	TFS2M

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