HO062437

EST Overview


Name	HO062437
Unique Name	HO062437
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	632

Libraries


Library Name	Type
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO062437 vs. TrEMBL
Match: A9PGY6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833314 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.170e-19
Identity = 31/64 (48.44%), Postives = 39/64 (60.94%), Query Frame = -1

Query:  165 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 356
            KAG+L + ++SWRK S             Y +  AA+RNN R+DND+PYGEA   KSQPS  HL
Sbjct:  221 KAGLLANLRKSWRKVSVINIVILIILVIAYVVGCAAFRNNRRIDNDEPYGEARMTKSQPSRIHL 284

HSP 2 Score: 54.299 bits (129), Expect = 6.170e-19
Identity = 33/92 (35.87%), Postives = 44/92 (47.83%), Query Frame = -2

Query:  353 WGRDKICYKDF*VV*KWGEFKPFSGICE*---FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 619
            W +   C +D  V  K G  +  SG+ E    F  RK    ++GCC PPT   + Y NE FW        +T     +N Q +LCYSC+S K
Sbjct:  132 WHKIGSCIRDSKVCGKMG--RTTSGVPETADTFYSRKLSSIESGCCKPPTECGFTYMNETFWSSSGGVVYSTDCNTWNNDQERLCYSCNSCK 221

[Close]

BLAST of HO062437 vs. TrEMBL
Match: B9SK16_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1398810 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.986e-18
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = -1

Query:  165 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 356
            KAGVLGS ++SWRK S             Y I  AA+RNN R+DND+PYGEA   K+QPS  HL
Sbjct:  221 KAGVLGSIRKSWRKVSVINIVILIILVIAYVIGCAAFRNNRRIDNDEPYGEARMTKAQPSRIHL 284

HSP 2 Score: 48.1358 bits (113), Expect = 2.986e-18
Identity = 32/92 (34.78%), Postives = 42/92 (45.65%), Query Frame = -2

Query:  353 WGRDKICYKDF*VV*KWGEFKPFSGICE*---FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 619
            W +   C +D  V  K G     +G+ E    F  RK +  Q+GCC PP++  + Y NE  W               SN Q QLCYSC+S K
Sbjct:  132 WSKISSCIRDSKVCAKMGV--TVNGVPETADMFFQRKLNPIQSGCCKPPSDCGFAYVNETVWTSVGGVVYNPDCNNWSNDQEQLCYSCNSCK 221

[Close]

BLAST of HO062437 vs. TrEMBL
Match: D7LMP3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_905722 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.877e-17
Identity = 37/64 (57.81%), Postives = 40/64 (62.50%), Query Frame = -1

Query:  165 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 356
            KAGVLGS K+SWRK S             Y IAYAAYRN  R+DND+P GEA   KS PS FHL
Sbjct:  222 KAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRIDNDEPVGEARMTKSHPSHFHL 285

HSP 2 Score: 42.743 bits (99), Expect = 1.877e-17
Identity = 32/99 (32.32%), Postives = 42/99 (42.42%), Query Frame = -2

Query:  353 WGRDKICYKDF*VV*KWGEFKPFSGICE*---FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPW-------EQD*WQTTRIQ*GSNAQHQLCYSCDSSK 619
            WG+   C +D     K G  + F+G+ E    F  R+    ++GCC PPT+  + Y NE  W          QD          SN Q  LCY C S K
Sbjct:  132 WGKISSCLRDSGACRKIG--RNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGGMIGPNQD------CMVWSNDQSMLCYQCSSCK 222

[Close]

BLAST of HO062437 vs. TrEMBL
Match: Q9M1E7_ARATH (At3g45600 OS=Arabidopsis thaliana GN=F9K21.180 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.441e-17
Identity = 37/64 (57.81%), Postives = 40/64 (62.50%), Query Frame = -1

Query:  165 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 356
            KAGVLGS K+SWRK S             Y IAYAAYRN  R+DND+P GEA   KS PS FHL
Sbjct:  222 KAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285

HSP 2 Score: 42.743 bits (99), Expect = 2.441e-17
Identity = 32/99 (32.32%), Postives = 42/99 (42.42%), Query Frame = -2

Query:  353 WGRDKICYKDF*VV*KWGEFKPFSGICE*---FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPW-------EQD*WQTTRIQ*GSNAQHQLCYSCDSSK 619
            WG+   C +D     K G  + F+G+ E    F  R+    ++GCC PPT+  + Y NE  W          QD          SN Q  LCY C S K
Sbjct:  132 WGKISSCLRDSGACRKIG--RNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGGMIGPNQD------CMVWSNDQSMLCYQCSSCK 222

[Close]

BLAST of HO062437 vs. TrEMBL
Match: D7MTS9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_358240 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.592e-16
Identity = 35/64 (54.69%), Postives = 39/64 (60.94%), Query Frame = -1

Query:  165 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 356
            KAGVLGS K+SWRK S             Y IAYAAYRN  R+DND+P GEA   KS PS F +
Sbjct:  222 KAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNIKRIDNDEPVGEARMTKSHPSHFQI 285

HSP 2 Score: 42.743 bits (99), Expect = 2.592e-16
Identity = 23/61 (37.70%), Postives = 28/61 (45.90%), Query Frame = -2

Query:  353 FRCRKTHFRQAGCCNPPTNWAYVYQNEAFW-PWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 532
            F  RK    ++GCC PPT+  Y Y NE  W P  +           +N Q  LCY C S K
Sbjct:  162 FYFRKLSPVESGCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCK 222

[Close]

BLAST of HO062437 vs. TrEMBL
Match: A5C8G2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035811 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.638e-15
Identity = 32/60 (53.33%), Postives = 37/60 (61.67%), Query Frame = -1

Query:  177 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPS 356
            KAGVL S K+SWRK S            VY +A AA+RNN R+DND+ YGE    KSQPS
Sbjct:  169 KAGVLASLKKSWRKVSVINIVILIILVIVYVVACAAFRNNRRIDNDEAYGETRMTKSQPS 228

HSP 2 Score: 46.595 bits (109), Expect = 1.638e-15
Identity = 26/61 (42.62%), Postives = 30/61 (49.18%), Query Frame = -2

Query:  353 FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPWEQD-*WQTTRIQ*GSNAQHQLCYSCDSSK 532
            F  RK    ++GCC PPT   YVY NE  W          +     SN Q QLCYSC+S K
Sbjct:  109 FYXRKLSPIESGCCKPPTECXYVYVNETVWTTGNGMVGSNSDCYSWSNDQGQLCYSCNSCK 169

[Close]

BLAST of HO062437 vs. TrEMBL
Match: D7SKT0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025122001 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.598e-15
Identity = 32/60 (53.33%), Postives = 37/60 (61.67%), Query Frame = -1

Query:  177 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPS 356
            KAGVL S K+SWRK S            VY +A AA+RNN R+DND+ YGE    KSQPS
Sbjct:  169 KAGVLASLKKSWRKVSVINIVILIILVIVYVVACAAFRNNRRIDNDEAYGETRMTKSQPS 228

HSP 2 Score: 45.4394 bits (106), Expect = 3.598e-15
Identity = 26/61 (42.62%), Postives = 30/61 (49.18%), Query Frame = -2

Query:  353 FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPWEQD-*WQTTRIQ*GSNAQHQLCYSCDSSK 532
            F  RK    ++GCC PPT   YVY NE  W          +     SN Q QLCYSC+S K
Sbjct:  109 FYRRKLSPIESGCCKPPTECDYVYVNETVWTTGNGMVGSNSDCYSWSNDQGQLCYSCNSCK 169

[Close]

BLAST of HO062437 vs. TrEMBL
Match: C6TJJ5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.149e-14
Identity = 49/110 (44.55%), Postives = 60/110 (54.55%), Query Frame = -1

Query:  165 QPSNQLGLCVSE*SILALGAGLMANNPNSIRE*CPTPTMLFM*-FIKAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 491
            +P    G      ++   G+GLM  NP+  R       + +     KAGVL S K+SWRK S            VY IAYAAYRNN +MDND+PYGEA   K+QPSAFHL
Sbjct:  176 KPPTDCGYVYQNETVWIPGSGLMGANPDCTRWSNDQEQLCYACDSCKAGVLASLKKSWRKVSVINIVVMIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKAQPSAFHL 285

[Close]

BLAST of HO062437 vs. TrEMBL
Match: Q75L87_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1729_E02.7 PE=4 SV=2)

HSP 1 Score: 51.2174 bits (121), Expect = 6.721e-13
Identity = 27/62 (43.55%), Postives = 35/62 (56.45%), Query Frame = -1

Query:  171 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAF 356
            KAGVL   K+SWRK +            VY    AA+RN  R++ND+P+G A   K+QPS F
Sbjct:  231 KAGVLAGIKKSWRKVAILNIVVLIILVIVYVAGCAAFRNARRIENDEPFGMARMTKTQPSRF 292

HSP 2 Score: 46.9802 bits (110), Expect = 6.721e-13
Identity = 24/54 (44.44%), Postives = 27/54 (50.00%), Query Frame = -2

Query:  353 QAGCCNPPTNWAYVYQNEAFW---PWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 505
            Q+GCC PPT+ AY Y NE FW   P              SN Q  LC+ CDS K
Sbjct:  178 QSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCK 231

[Close]

BLAST of HO062437 vs. TrEMBL
Match: B8AXD3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18258 PE=4 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 6.721e-13
Identity = 27/62 (43.55%), Postives = 35/62 (56.45%), Query Frame = -1

Query:  171 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAF 356
            KAGVL   K+SWRK +            VY    AA+RN  R++ND+P+G A   K+QPS F
Sbjct:  231 KAGVLAGIKKSWRKVAILNIVVLIILVIVYVAGCAAFRNARRIENDEPFGMARMTKTQPSRF 292

HSP 2 Score: 46.9802 bits (110), Expect = 6.721e-13
Identity = 24/54 (44.44%), Postives = 27/54 (50.00%), Query Frame = -2

Query:  353 QAGCCNPPTNWAYVYQNEAFW---PWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 505
            Q+GCC PPT+ AY Y NE FW   P              SN Q  LC+ CDS K
Sbjct:  178 QSGCCKPPTSCAYNYVNETFWTANPGVPTVVNDVDCSKWSNDQQTLCFQCDSCK 231

[Close]

BLAST of HO062437 vs. TAIR peptide
Match: AT3G45600.1 (| Symbols: TET3 | tetraspanin3 | chr3:16733973-16735854 REVERSE LENGTH=285)

HSP 1 Score: 70.4774 bits (171), Expect = 1.741e-19
Identity = 37/64 (57.81%), Postives = 40/64 (62.50%), Query Frame = -1

Query:  165 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEAGRIKSQPSAFHL 356
            KAGVLGS K+SWRK S             Y IAYAAYRN  R+DND+P GEA   KS PS FHL
Sbjct:  222 KAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285

HSP 2 Score: 42.743 bits (99), Expect = 1.741e-19
Identity = 32/99 (32.32%), Postives = 42/99 (42.42%), Query Frame = -2

Query:  353 WGRDKICYKDF*VV*KWGEFKPFSGICE*---FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPW-------EQD*WQTTRIQ*GSNAQHQLCYSCDSSK 619
            WG+   C +D     K G  + F+G+ E    F  R+    ++GCC PPT+  + Y NE  W          QD          SN Q  LCY C S K
Sbjct:  132 WGKISSCLRDSGACRKIG--RNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGGMIGPNQD------CMVWSNDQSMLCYQCSSCK 222

[Close]

BLAST of HO062437 vs. TAIR peptide
Match: AT5G60220.1 (| Symbols: TET4 | tetraspanin4 | chr5:24248957-24250065 FORWARD LENGTH=327)

HSP 1 Score: 51.6026 bits (122), Expect = 1.426e-13
Identity = 28/52 (53.85%), Postives = 31/52 (59.62%), Query Frame = -1

Query:  201 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRNNPRMDNDDPYGEA 356
            KAGVLGS K+SWRK S             Y IA AAY+N  RM ND+P GEA
Sbjct:  222 KAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNVKRMYNDEPVGEA 273

HSP 2 Score: 41.5874 bits (96), Expect = 1.426e-13
Identity = 20/52 (38.46%), Postives = 25/52 (48.08%), Query Frame = -2

Query:  353 QAGCCNPPTNWAYVYQNEAFW-PWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 505
            ++GCC PPT+  Y Y NE  W P  +           +N Q  LCY C S K
Sbjct:  171 ESGCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCK 222

[Close]

BLAST of HO062437 vs. TAIR peptide
Match: AT2G19580.1 (| Symbols: TET2 | tetraspanin2 | chr2:8472393-8475021 REVERSE LENGTH=270)

HSP 1 Score: 45.4394 bits (106), Expect = 1.354e-8
Identity = 30/89 (33.71%), Postives = 38/89 (42.70%), Query Frame = -2

Query:  353 WGRDKICYKDF*VV*KWGEFKPFSGICE*FRCRKTHFRQAGCCNPPTNWAYVYQNEAFWPWEQD*WQTTRIQ*GSNAQHQLCYSCDSSK 619
            WGR + C  D  V  K  +   F    + F   K    Q+GCC PPT   Y + N   W    +          SN Q QLCY+C+S K
Sbjct:  131 WGRLRACLADTNVCPKLNQ--EFITADQFFSSSKITPLQSGCCKPPTACGYNFVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCK 217

HSP 2 Score: 30.8018 bits (68), Expect = 1.354e-8
Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = -1

Query:  240 KAGVLGSSKRSWRKGSXXXXXXXXXXXXVYKIAYAAYRN 356
            KAG+LG+ ++ WRK +            VY IA +A+RN
Sbjct:  217 KAGLLGNLRKEWRKANLILIITVVVLIWVYVIACSAFRN 255

The following BLAST results are available for this feature:

BLAST of HO062437 vs. TrEMBL
BLAST of HO062437 vs. TAIR peptide

BLAST of HO062437 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9PGY6_POPTR	6.170e-19	48.44	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SK16_RICCO	2.986e-18	53.13	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7LMP3_ARALY	1.877e-17	57.81	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9M1E7_ARATH	2.441e-17	57.81	At3g45600 OS=Arabidopsis thaliana GN=F9K21.180 PE=...	[more]
D7MTS9_ARALY	2.592e-16	54.69	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A5C8G2_VITVI	1.638e-15	53.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7SKT0_VITVI	3.598e-15	53.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6TJJ5_SOYBN	5.149e-14	44.55	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q75L87_ORYSJ	6.721e-13	43.55	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AXD3_ORYSI	6.721e-13	43.55	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of HO062437 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G45600.1	1.741e-19	57.81	\| Symbols: TET3 \| tetraspanin3 \| chr3:16733973-167...	[more]
AT5G60220.1	1.426e-13	53.85	\| Symbols: TET4 \| tetraspanin4 \| chr5:24248957-242...	[more]
AT2G19580.1	1.354e-8	33.71	\| Symbols: TET2 \| tetraspanin2 \| chr2:8472393-8475...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..13 score
None	No IPR available	SEG	seg	seg	coord: 35..52 score
None	No IPR available	SEG	seg	seg	coord: 19..31 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO062437 ID=HO062437; Name=HO062437; organism=Cicer arietinum; type=EST; length=632bp
AAAAAAAACAATATCGAACCATTCAACTTGTTCCAAAATTAAAACCAAAG
TCCTGCATACTAAAGAGCTTTTATACAAAAGCCAAGCCAAGCCCCAAAAT
CCATTGGGAATTATATCCAAATAGACATAAACTAAGTGCAATTAATAAAA
AAAGTAAGTAATTAAAGATGAAATGCACTCGGTTGTGACTTAATCCTCCC
AGCTTCCCCATAAGGGTCATCATTATCCATTCTGGGGTTGTTCCTATAAG
CTGCATAAGCAATTTTGTAAACAATTACCAGGATGATCATAACAACAATG
TTGATCACAGACCCTTTCCTCCAACTCCTCTTGGAACTACCAAGCACACC
AGCTTTGATGAATCACATGAATAACATAGTTGGTGTTGGGCATTACTCCC
TTATTGAATTCGGGTTGTTTGCCATTAGTCCTGCTCCCAGGGCCAAAATG
CTTCATTCTGATACACATAGGCCCAATTGGTTGGAGGGTTGCAGCACCCG
GCTTGACGGAAGTGAGTTTTCCTACACCGAAACTATTCACAGATTCCGGA
AAACGGTTTAAATTCTCCCCATTTTTAAACAACTTAGAAATCCTTATAAC
AGATCTTATCTCTTCCCCATATTTATCCCTCT

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