HO062738
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO062738 vs. SwissProt
Match: BRE1A_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica GN=BRE1A PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.785e-25 Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = -1 Query: 1 LQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 360 L L+ ++ +G +P T+GN ++P D++RDKQ+++QD E+T KEL + S RLVE+K LHEERI +L ++ QN L + K I SS AFQLV D++ KS++E+ YQ L EKLQV+K Sbjct: 272 LAALKAQRDNTQGARIPYPTLGNKNMPEDKVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDK 391
BLAST of HO062738 vs. SwissProt
Match: BRE1A_ORYSI (E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. indica GN=BRE1A PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.750e-25 Identity = 58/120 (48.33%), Postives = 83/120 (69.17%), Query Frame = -1 Query: 1 LQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 360 L L+ ++ +G +P T+GN +P D++RDKQ+++QD E+T KEL + S RLVE+K LHEERI +L ++ QN L + K I SS AFQLV D++ KS++E+ YQ L EKLQV+K Sbjct: 272 LAALKAQRDNTQGARIPYPTLGNKSMPEDKVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDK 391
BLAST of HO062738 vs. SwissProt
Match: BRE1A_ARATH (E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana GN=HUB1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.357e-24 Identity = 65/147 (44.22%), Postives = 97/147 (65.99%), Query Frame = -1 Query: 1 KIKPELKRLKGGTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K++ +LKR++G + + ++ +L LR + G PVL++GN +DR RDKQ+DLQD E+ LKEL AS RL +LK+LHEER ++L ++ +LQN K+++ I+SS A ++DQ++KSK V +Y AL EKLQVEK Sbjct: 240 KVRVDLKRIRGELEDEVVEL-QQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEK 385
BLAST of HO062738 vs. SwissProt
Match: BRE1B_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica GN=BRE1B PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.958e-8 Identity = 30/98 (30.61%), Postives = 53/98 (54.08%), Query Frame = -1 Query: 1 NTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 294 N + D+ DK +D + ++E A+ RL EL E+ + + +QL D+Q+ LK+ +I +S + ++ DQ+ +E+ Y+ L E LQ EK Sbjct: 255 NGSVSTDKSSDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEK 352 HSP 2 Score: 23.0978 bits (48), Expect = 1.958e-8 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = -3 Query: 341 GNWKAGVEELEESNHKLATLKVE 409 G + + ELEES KLA L+++ Sbjct: 217 GELEESMAELEESRRKLAVLQLQ 239
BLAST of HO062738 vs. SwissProt
Match: BRE1B_ORYSI (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica GN=BRE1B PE=3 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 1.958e-8 Identity = 30/98 (30.61%), Postives = 53/98 (54.08%), Query Frame = -1 Query: 1 NTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 294 N + D+ DK +D + ++E A+ RL EL E+ + + +QL D+Q+ LK+ +I +S + ++ DQ+ +E+ Y+ L E LQ EK Sbjct: 255 NGSVSTDKSSDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEK 352 HSP 2 Score: 23.0978 bits (48), Expect = 1.958e-8 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = -3 Query: 341 GNWKAGVEELEESNHKLATLKVE 409 G + + ELEES KLA L+++ Sbjct: 217 GELEESMAELEESRRKLAVLQLQ 239
BLAST of HO062738 vs. TrEMBL
Match: B9RD36_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1609290 PE=4 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.956e-35 Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = -1 Query: 1 KIKPELKRLKGGTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K K EL RLKG + +++ L L+ + KG PVL VGN H D+ RDKQ++LQ+ ESTLKEL DQAS+RL +LK+LH+ERI++LQQL +LQN+LKNLK I+SS A+ LVRDQ++KSKSEV +YQAL+EKLQVE+ Sbjct: 241 KNKAELNRLKGEL-ESAVSELEESNCKLASLKAERDATKGAFFPVLNVGNKHASGDKARDKQRNLQEMESTLKELLDQASSRLRDLKALHDERIKILQQLSNLQNSLKNLKCISSSQAYILVRDQLEKSKSEVFQYQALHEKLQVER 386
BLAST of HO062738 vs. TrEMBL
Match: B9GP99_POPTR (Histone ubiquitination proteins group OS=Populus trichocarpa GN=HUPA902 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.347e-34 Identity = 82/147 (55.78%), Postives = 105/147 (71.43%), Query Frame = -1 Query: 1 KIKPELKRLKGGTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K K ELK LKG + K + L L+ + KG PVL +G+ HI D++RDKQKDLQ+ ES +KEL DQAS+RL ELK LHEER+++LQ+L +LQN LKN+K I+SS A+ LVRDQ++KSKSEV +Y+AL EKLQVEK Sbjct: 233 KNKAELKHLKGEL-EIAVAELKDSNCKLATLKAERDATKGAFFPVLNLGSKHIGGDKVRDKQKDLQEMESAVKELLDQASSRLQELKDLHEERLKILQKLSNLQNLLKNVKSISSSQAYLLVRDQLEKSKSEVLQYRALIEKLQVEK 378
BLAST of HO062738 vs. TrEMBL
Match: D7SLV1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018223001 PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.350e-32 Identity = 81/150 (54.00%), Postives = 110/150 (73.33%), Query Frame = -1 Query: 1 KIKPELKRLKG---GTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K K ELKRL+G T + +S K +T L+ + KG P+L++G+ ++ D+ RDKQKDL D E+TLKEL DQ+S+RL+ELK+L+EERI +L+QL +LQNTLKN+K I+SS A+ LV DQ++KSK+EV YQAL+EKLQVEK Sbjct: 240 KNKAELKRLRGELESTVAELEESNCKLVT----LKAERDAAKGAFFPILSLGSKNVAGDKARDKQKDLHDMEATLKELLDQSSSRLLELKALYEERIGILKQLSNLQNTLKNVKCISSSSAYVLVTDQLEKSKAEVVHYQALFEKLQVEK 385
BLAST of HO062738 vs. TrEMBL
Match: B9MV16_POPTR (Histone ubiquitination proteins group OS=Populus trichocarpa GN=HUPA901 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.927e-32 Identity = 79/147 (53.74%), Postives = 102/147 (69.39%), Query Frame = -1 Query: 1 KIKPELKRLKGGTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K K ELK LKG + + L L+ + KG PVL +G+ H D++RDKQKDLQ+ ES +KEL DQAS+RL ELK LHEER+++LQ+L +LQN LKN+K I+SS A+ LVRDQ++KSKS V Y+AL+EKLQVEK Sbjct: 252 KNKAELKHLKGEL-ETTVAELNDSNCKLATLKAERNATKGAFFPVLNMGSKHAAGDQVRDKQKDLQEMESAVKELLDQASSRLQELKDLHEERLKILQKLSNLQNLLKNVKSISSSRAYLLVRDQLEKSKSMVLHYRALFEKLQVEK 397
BLAST of HO062738 vs. TrEMBL
Match: B9FGG6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_15692 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.936e-24 Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = -1 Query: 1 LQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 360 L L+ ++ +G +P T+GN ++P D++RDKQ+++QD E+T KEL + S RLVE+K LHEERI +L ++ QN L + K I SS AFQLV D++ KS++E+ YQ L EKLQV+K Sbjct: 272 LAALKAQRDNTQGARIPYPTLGNKNMPEDKVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDK 391
BLAST of HO062738 vs. TrEMBL
Match: D7LBU2_ARALY (Histone mono-ubiquitination 1 OS=Arabidopsis lyrata subsp. lyrata GN=HUB1 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.352e-23 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = -1 Query: 1 KIKPELKRLKGGTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K++ +LKR++G + + ++ +L LR + G PVL++GN +DR RDKQ+DL D E+ LKEL AS RL ELK LHEER ++L+++ +LQN K+++ I+SS A ++DQ+ KSK V +Y AL EKLQVEK Sbjct: 240 KVRADLKRIRGELEDEVVEL-QQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERDKQRDLHDMETVLKELTVLASGRLQELKDLHEERTKMLEKMSNLQNKSKSVRCISSSQACLSLKDQLKKSKEAVFQYMALLEKLQVEK 385
BLAST of HO062738 vs. TrEMBL
Match: A5ALF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024408 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.880e-22 Identity = 50/109 (45.87%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 1 KGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 327 KG P+L++G+ ++ D+ RDKQKDL D E+TLKEL NTLKN+K I+SS A+ LV DQ++KSK+EV YQAL+EKLQVEK Sbjct: 410 KGAFFPILSLGSKNVAGDKARDKQKDLHDMEATLKELL----------------------------NTLKNVKCISSSSAYVLVTDQLEKSKAEVVHYQALFEKLQVEK 490 HSP 2 Score: 40.0466 bits (92), Expect = 7.880e-22 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = -3 Query: 302 GNWKAGVEELEESNHKLATLKVEKDAAKGGSSPSIN 409 G ++ V ELEESN KL TLK E+DAAKG P ++ Sbjct: 383 GELESTVAELEESNCKLVTLKAERDAAKGAFFPILS 418
BLAST of HO062738 vs. TrEMBL
Match: A5YX89_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana GN=At2g44950 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.190e-18 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = -1 Query: 1 RDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 267 RDKQ+DLQD E+ LKEL AS RL ELK+LHEER ++L ++ +LQN K+++ I+SS A ++DQ++KSK V +Y AL EKLQVEK Sbjct: 1 RDKQRDLQDMETVLKELTVLASGRLQELKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEK 89
BLAST of HO062738 vs. TrEMBL
Match: A5YX88_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana GN=At2g44950 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.602e-17 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = -1 Query: 1 RDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 267 RDKQ+DLQD E+ LKEL AS RL +LK+LHEER ++L ++ +LQN K+++ I+SS A ++DQ++KSK V +Y AL EKLQVEK Sbjct: 1 RDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEK 89
BLAST of HO062738 vs. TrEMBL
Match: A5YXA4_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana GN=At2g44950 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.092e-17 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = -1 Query: 1 RDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 267 RDKQ+DLQD E+ LKEL AS RL +LK+LHEER ++L ++ +LQN K+++ I+SS A ++DQ++KSK V +Y AL EKLQVEK Sbjct: 1 RDKQRDLQDMETVLKELTVLASGRLQKLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEK 89
BLAST of HO062738 vs. TAIR peptide
Match: AT2G44950.1 (| Symbols: RDO4, HUB1 | histone mono-ubiquitination 1 | chr2:18542602-18548247 REVERSE LENGTH=878) HSP 1 Score: 112.079 bits (279), Expect = 2.448e-25 Identity = 65/147 (44.22%), Postives = 97/147 (65.99%), Query Frame = -1 Query: 1 KIKPELKRLKGGTGKQGWKS*KKAITNLQHLR*RKMQPKGVVLPVLTVGNTHIPNDRIRDKQKDLQDRESTLKELWDQASTRLVELKSLHEERIRVLQQLCDLQNTLKNLKWITSSHAFQLVRDQIDKSKSEVREYQALYEKLQVEK 441 K++ +LKR++G + + ++ +L LR + G PVL++GN +DR RDKQ+DLQD E+ LKEL AS RL +LK+LHEER ++L ++ +LQN K+++ I+SS A ++DQ++KSK V +Y AL EKLQVEK Sbjct: 240 KVRVDLKRIRGELEDEVVEL-QQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEK 385 The following BLAST results are available for this feature:
BLAST of HO062738 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 5
BLAST of HO062738 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO062738 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO062738 ID=HO062738; Name=HO062738; organism=Cicer arietinum; type=EST; length=615bpback to top |