HO664257

EST Overview


Name	HO664257
Unique Name	HO664257
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	515

Libraries


Library Name	Type
LIBEST_026619 TDZ treated Chickpea SSH library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO664257 vs. SwissProt
Match: RK17_ARATH (50S ribosomal protein L17, chloroplastic OS=Arabidopsis thaliana GN=RPL17 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.576e-56
Identity = 106/113 (93.81%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQRKAL+RGLTTQLLK+GRIKTTRARASA+RK+VDKMITLAKDGSLHKRRQALG++YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:   99 GRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 211

[Close]

BLAST of HO664257 vs. SwissProt
Match: RK17_TOBAC (50S ribosomal protein L17, chloroplastic OS=Nicotiana tabacum GN=RPL17 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.022e-55
Identity = 103/113 (91.15%), Postives = 112/113 (99.12%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GR+VPKLNRPPDQR+AL+RGLTTQLLK+GRIKTT+ARA A+RKYVDKMIT+AKDGSLHKRRQALGF+YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:   93 GRKVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTKARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 205

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_SYNR3 (50S ribosomal protein L17 OS=Synechococcus sp. (strain RCC307) GN=rplQ PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.027e-39
Identity = 77/111 (69.37%), Postives = 96/111 (86.49%), Query Frame = -2

Query:  176 RVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 508
            RVP+L RP DQRKA++RGLTTQL++ GR+ TT+ARA A+R   ++MI+LAKDGSL  RR+ALG++Y+KQ+VHALF +  ERYG+RNGGYTRIIRT+PRRGDNA MA IELV
Sbjct:    6 RVPQLGRPADQRKAMLRGLTTQLIREGRVTTTKARAKALRDETERMISLAKDGSLAARRRALGYIYDKQLVHALFDKASERYGDRNGGYTRIIRTVPRRGDNAEMAIIELV 116

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_ACAM1 (50S ribosomal protein L17 OS=Acaryochloris marina (strain MBIC 11017) GN=rplQ PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.287e-39
Identity = 77/110 (70.00%), Postives = 95/110 (86.36%), Query Frame = -2

Query:  179 RVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIEL 508
            RV KL +P DQRKAL+R L+TQL+++GR+ TT+ARA A+R  V+KMITLAKDGSL  RRQALG++Y+KQ+VHALF +V +RYG+RNGGYTRIIRT+ RRGDNA MA IEL
Sbjct:    6 RVHKLGKPADQRKALLRSLSTQLIRHGRVTTTKARAKAVRSQVEKMITLAKDGSLASRRQALGYIYDKQLVHALFDQVADRYGDRNGGYTRIIRTIRRRGDNAEMAIIEL 115

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_THEEB (50S ribosomal protein L17 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplQ PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.987e-39
Identity = 76/112 (67.86%), Postives = 97/112 (86.61%), Query Frame = -2

Query:  176 RRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 511
            RRVP+L RP DQRKAL+R LTT+L+++GRI TT+ARA A+R   ++MITLAKDGSL  RR+ALG++Y+KQ+VH+LFA+ PERYG+R GGYTRIIR++ RRGDNA +A IELV
Sbjct:    5 RRVPQLGRPADQRKALLRALTTELIRHGRITTTKARAKAVRAEAERMITLAKDGSLAARRRALGYLYDKQLVHSLFAQAPERYGDRQGGYTRIIRSVRRRGDNAELAVIELV 116

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_SYNP2 (50S ribosomal protein L17 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplQ PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 3.901e-39
Identity = 75/113 (66.37%), Postives = 97/113 (85.84%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            G RVP+L RP DQRKAL+R LTTQL+++G++KTT+ARA A+R  VD+MITLAKDGSL  RR+ALG++Y+K +VHALFA+  +RYG+R GGY+R++RT+ RRGDNA MA IELV
Sbjct:    4 GCRVPELGRPADQRKALLRALTTQLIRHGQVKTTKARAKAVRSEVDRMITLAKDGSLAARRRALGYMYDKDLVHALFAQAKDRYGDRQGGYSRVVRTVRRRGDNAEMAIIELV 116

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_SYNS3 (50S ribosomal protein L17 OS=Synechococcus sp. (strain CC9311) GN=rplQ PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.654e-39
Identity = 77/111 (69.37%), Postives = 93/111 (83.78%), Query Frame = -2

Query:  176 RVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 508
            RVP L RP DQRKAL+RGLTTQL++ GR+ TT+ARA A+R   ++MITLAK+GSL  RR+ LG+VY+KQ+VHALF + P RYG+RNGGYTRI RT+PRRGDNA MA IELV
Sbjct:    6 RVPLLGRPADQRKALLRGLTTQLIREGRVTTTKARAKALRDEAERMITLAKNGSLASRRRVLGYVYDKQLVHALFDKAPTRYGDRNGGYTRITRTVPRRGDNAEMAIIELV 116

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_PROMT (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain NATL2A) GN=rplQ PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.654e-39
Identity = 74/112 (66.07%), Postives = 95/112 (84.82%), Query Frame = -2

Query:  176 RRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 511
            RR+P+L+ P DQRKAL+RGLTTQL++ GR+ TT+ARA A+R   ++MITLAKDGSL  RR+A+G+VY+KQ+VHALF +  ERYG+R GGYTRI+RT PRRGDN+ MA +ELV
Sbjct:    5 RRIPQLSLPADQRKALLRGLTTQLIREGRVTTTKARAKALRNETERMITLAKDGSLASRRRAIGYVYDKQLVHALFEKAQERYGDREGGYTRIVRTTPRRGDNSEMAIVELV 116

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_PROMM (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplQ PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.654e-39
Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = -2

Query:  176 RVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 508
            RVPKL RP DQRKA++RGLTTQL++ GR+ TT+ARA A+R   ++MITLAK+GSL  RR+A+G++Y+KQ+VHALF +  +RYG+R GGYTRIIRT+PRRGDNA MA IELV
Sbjct:    6 RVPKLGRPTDQRKAMLRGLTTQLIREGRVTTTKARAKALRDEAERMITLAKNGSLASRRRAIGYIYDKQLVHALFDKAQDRYGDRQGGYTRIIRTVPRRGDNAEMAIIELV 116

[Close]

BLAST of HO664257 vs. SwissProt
Match: RL17_PROM3 (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplQ PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.654e-39
Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = -2

Query:  176 RVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 508
            RVPKL RP DQRKA++RGLTTQL++ GR+ TT+ARA A+R   ++MITLAK+GSL  RR+A+G++Y+KQ+VHALF +  +RYG+R GGYTRIIRT+PRRGDNA MA IELV
Sbjct:    6 RVPKLGRPTDQRKAMLRGLTTQLIREGRVTTTKARAKALRDEAERMITLAKNGSLASRRRAIGYIYDKQLVHALFDKAQDRYGDRQGGYTRIIRTVPRRGDNAEMAIIELV 116

[Close]

BLAST of HO664257 vs. TrEMBL
Match: C6T088_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.141e-57
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQR+ALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGF+YEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:  105 GRRVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217

[Close]

BLAST of HO664257 vs. TrEMBL
Match: B7FGK1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.813e-56
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GR+VPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGF+YEKQIVHALFAEV ERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:  102 GRKVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 214

[Close]

BLAST of HO664257 vs. TrEMBL
Match: B9S1V8_RICCO (Ribosomal protein L17, putative OS=Ricinus communis GN=RCOM_1323290 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.092e-56
Identity = 108/113 (95.58%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQRKAL+RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGF+YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:  105 GRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217

[Close]

BLAST of HO664257 vs. TrEMBL
Match: D7U8D4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_92.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037929001 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.038e-56
Identity = 107/113 (94.69%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQR+AL+RGLTTQLLKYGRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGF+YEKQIVHALFAEVP+RYG+RNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:   46 GRRVPKLNRPPDQRRALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 158

[Close]

BLAST of HO664257 vs. TrEMBL
Match: B9MTR6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_282545 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 6.888e-56
Identity = 107/113 (94.69%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQR+AL+RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGF+YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:   26 GRRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 138

[Close]

BLAST of HO664257 vs. TrEMBL
Match: A9PC28_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 6.888e-56
Identity = 107/113 (94.69%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQR+AL+RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGF+YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:  112 GRRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 224

[Close]

BLAST of HO664257 vs. TrEMBL
Match: C6TLN4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.175e-55
Identity = 107/113 (94.69%), Postives = 112/113 (99.12%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GR+VPKLNRPPDQR+AL+RGLTTQLLKYGRIKTTRARASAIRK+VDKMITLAKDGSLHKR QALGF+YEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:  102 GRKVPKLNRPPDQRRALVRGLTTQLLKYGRIKTTRARASAIRKFVDKMITLAKDGSLHKRGQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 214

[Close]

BLAST of HO664257 vs. TrEMBL
Match: D7LUR6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485818 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.465e-55
Identity = 105/113 (92.92%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQRKAL+RGLTTQLLK+GRIKTTRARASA+RK+VDKMITLAKDGSLHKRRQALG++YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIEL+
Sbjct:   99 GRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELL 211

[Close]

BLAST of HO664257 vs. TrEMBL
Match: B9IGZ1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_254603 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.465e-55
Identity = 105/113 (92.92%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            G+RVPKLNRPPDQR+AL+RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGF++EKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:   31 GKRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIFEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 143

[Close]

BLAST of HO664257 vs. TrEMBL
Match: A9P8K2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.465e-55
Identity = 105/113 (92.92%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            G+RVPKLNRPPDQR+AL+RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGF++EKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:  115 GKRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIFEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 227

[Close]

BLAST of HO664257 vs. TAIR peptide
Match: AT3G54210.1 (| Symbols: | Ribosomal protein L17 family protein | chr3:20067672-20068385 REVERSE LENGTH=211)

HSP 1 Score: 218.394 bits (555), Expect = 1.752e-57
Identity = 106/113 (93.81%), Postives = 113/113 (100.00%), Query Frame = -2

Query:  176 GRRVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 514
            GRRVPKLNRPPDQRKAL+RGLTTQLLK+GRIKTTRARASA+RK+VDKMITLAKDGSLHKRRQALG++YEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct:   99 GRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 211

[Close]

BLAST of HO664257 vs. TAIR peptide
Match: AT5G09770.1 (| Symbols: | Ribosomal protein L17 family protein | chr5:3035267-3036518 REVERSE LENGTH=160)

HSP 1 Score: 106.301 bits (264), Expect = 9.705e-24
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = -2

Query:  176 KLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 499
            KL RP   R +++R + +QL+K+ RI+TT  +A  +R+  D MI L K+GSL   R+A GFV    ++H +F E+  RY +R GGYTR++RT  R GD APMAYIE +
Sbjct:    6 KLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMIQLGKEGSLSAARRAAGFVRGDDVLHKIFTELAHRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFI 113

[Close]

BLAST of HO664257 vs. TAIR peptide
Match: AT5G64650.1 (| Symbols: | Ribosomal protein L17 family protein | chr5:25839542-25840775 REVERSE LENGTH=160)

HSP 1 Score: 103.99 bits (258), Expect = 4.817e-23
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = -2

Query:  176 KLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFVYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 499
            KL RP   R +++R + +QL+++ RI+TT  +A  +R+  D MI L K+GSL   R+A GFV    ++H +F E+  RY +R GGYTR++RT  R GD APMAYIE +
Sbjct:    6 KLGRPAGHRMSMLRTMVSQLVQHERIETTVTKAKEVRRLADNMIQLGKEGSLAAARRAAGFVRGDDVLHKIFTELAHRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFI 113

The following BLAST results are available for this feature:

BLAST of HO664257 vs. SwissProt
BLAST of HO664257 vs. TrEMBL
BLAST of HO664257 vs. TAIR peptide

BLAST of HO664257 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RK17_ARATH	1.576e-56	93.81	50S ribosomal protein L17, chloroplastic OS=Arabid...	[more]
RK17_TOBAC	1.022e-55	91.15	50S ribosomal protein L17, chloroplastic OS=Nicoti...	[more]
RL17_SYNR3	1.027e-39	69.37	50S ribosomal protein L17 OS=Synechococcus sp. (st...	[more]
RL17_ACAM1	2.287e-39	70.00	50S ribosomal protein L17 OS=Acaryochloris marina ...	[more]
RL17_THEEB	2.987e-39	67.86	50S ribosomal protein L17 OS=Thermosynechococcus e...	[more]
RL17_SYNP2	3.901e-39	66.37	50S ribosomal protein L17 OS=Synechococcus sp. (st...	[more]
RL17_SYNS3	6.654e-39	69.37	50S ribosomal protein L17 OS=Synechococcus sp. (st...	[more]
RL17_PROMT	6.654e-39	66.07	50S ribosomal protein L17 OS=Prochlorococcus marin...	[more]
RL17_PROMM	6.654e-39	67.57	50S ribosomal protein L17 OS=Prochlorococcus marin...	[more]
RL17_PROM3	6.654e-39	67.57	50S ribosomal protein L17 OS=Prochlorococcus marin...	[more]

BLAST of HO664257 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T088_SOYBN	2.141e-57	98.23	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FGK1_MEDTR	1.813e-56	97.35	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9S1V8_RICCO	3.092e-56	95.58	Ribosomal protein L17, putative OS=Ricinus communi...	[more]
D7U8D4_VITVI	4.038e-56	94.69	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9MTR6_POPTR	6.888e-56	94.69	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A9PC28_POPTR	6.888e-56	94.69	Putative uncharacterized protein OS=Populus tricho...	[more]
C6TLN4_SOYBN	1.175e-55	94.69	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7LUR6_ARALY	4.465e-55	92.92	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9IGZ1_POPTR	4.465e-55	92.92	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A9P8K2_POPTR	4.465e-55	92.92	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of HO664257 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G54210.1	1.752e-57	93.81	\| Symbols: \| Ribosomal protein L17 family protein...	[more]
AT5G09770.1	9.705e-24	47.22	\| Symbols: \| Ribosomal protein L17 family protein...	[more]
AT5G64650.1	4.817e-23	46.30	\| Symbols: \| Ribosomal protein L17 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000456	Ribosomal protein L17	GENE3D	3.90.1030.10	no description	coord: 3..113 score: 6.4
IPR000456	Ribosomal protein L17	HAMAP	MF_01368	Ribosomal_L17	coord: 2..113 score: 25
IPR000456	Ribosomal protein L17	PANTHER	PTHR14413	RIBOSOMAL PROTEIN L17	coord: 1..113 score: 9.4
IPR000456	Ribosomal protein L17	PFAM	PF01196	Ribosomal_L17	coord: 17..113 score: 3.9
IPR000456	Ribosomal protein L17	TIGRFAMs	TIGR00059	L17: ribosomal protein L17	coord: 3..113 score: 2.2
IPR000456	Ribosomal protein L17	SUPERFAMILY	64263	Prokaryotic ribosomal protein L17	coord: 11..113 score: 1.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO664257 ID=HO664257; Name=HO664257; organism=Cicer arietinum; type=EST; length=515bp
AGCGTGGTCGCGGCCGAGGTACAGTTCAGAAAAAGATGCAAGCTCACAAA
TACAAATACAACTAAACATGGGAAAAACTGTAGAATCAATTGTTACCATT
GGAAGCATTACAAATCTCAACATTGCAGCTTGAATGCTGCTAATTGCATC
CCGTATAGGAGGCGGCTAATAATTACACAAGTTCAATGTATGCCATAGGT
GCATTATCACCCCGCCTTGGTAGGGTTCTTATAATTCTTGTATAACCGCC
GTTTCTTTCGCCATAACGCTCTGGAACCTCTGCAAATAAAGCATGAACAA
TCTGCTTCTCATAGACGAAGCCGAGGGCTTGTCTCCTTTTATGAAGAGAA
CCATCCTTTGCCAGAGTGATCATTTTATCAACATACTTCCTAATTGCACT
GGCTCTTGCCCTTGTGGTCTTGATGCGGCCATATTTAAGGAGCTGAGTTG
TAAGACCTCGAATGAGTGCCTTACGCTGATCAGGAGGCCTGTTGAGTTTG
GGCACTCGTCTTCCG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000456	Ribosomal_bL17

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