CK149047

EST Overview
NameCK149047
Unique NameCK149047
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length544
Libraries
Library NameType
LIBEST_014674 Suppressive subtractive hybridization librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of CK149047 vs. TrEMBL
Match: D3YBE9_TRIRP (Zinc knuckle (CcHc-type) family protein OS=Trifolium repens PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.956e-29
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            PG+RKIRSDRFS+RDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPG+
Sbjct:   16 PGIRKIRSDRFSYRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGH 74          
BLAST of CK149047 vs. TrEMBL
Match: C6TNV0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.051e-27
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  RKIRSDRFS+RDAPYRRDS RGFSRDNLCKNCKRPGHYARECPNVA+CHNCGLPG+
Sbjct:   14 PMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGH 72          
BLAST of CK149047 vs. TrEMBL
Match: C6T6L3_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.051e-27
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  RKIRSDRFS+RDAPYRRDS RGFSRDNLCKNCKRPGHYARECPNVA+CHNCGLPG+
Sbjct:   14 PMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGH 72          
BLAST of CK149047 vs. TrEMBL
Match: B9RHD0_RICCO (Cellular nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1450080 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.884e-24
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  RKIRSDRFS+R APYRR+S RGFS++NLCKNCKRPGH+ARECPNVA+CHNCGLPG+
Sbjct:   20 PMDRKIRSDRFSYRGAPYRRESRRGFSQNNLCKNCKRPGHFARECPNVAICHNCGLPGH 78          
BLAST of CK149047 vs. TrEMBL
Match: D3YBF0_TRIRP (Zinc knuckle (CcHc-type) family protein OS=Trifolium repens PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.379e-24
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R+ RS+RFS RDAPYRRDS RGFS+DNLCKNCKRPGHYARECPN+AVCHNC LPG+
Sbjct:   20 PMDRRFRSERFSHRDAPYRRDSRRGFSQDNLCKNCKRPGHYARECPNIAVCHNCSLPGH 78          
BLAST of CK149047 vs. TrEMBL
Match: D7U5H5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024180001 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.856e-23
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  RKIR+DR S+R+APYRRDS RGFS+ NLCKNCKRPGHYARECPNVAVCHNC LPG+
Sbjct:   12 PQDRKIRTDRLSYRNAPYRRDSRRGFSQGNLCKNCKRPGHYARECPNVAVCHNCSLPGH 70          
BLAST of CK149047 vs. TrEMBL
Match: B9H0X4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_195673 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.798e-22
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRG--FSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R+IRSDRFS+R APYRR+S RG  F + NLCKNCKRPGHYARECPNVA+CHNCGLPG+
Sbjct:    6 PMDRRIRSDRFSYRGAPYRRESRRGYRFLQSNLCKNCKRPGHYARECPNVAICHNCGLPGH 66          
BLAST of CK149047 vs. TrEMBL
Match: B9R835_RICCO (Cellular nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1596490 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.508e-20
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R+IRS R S+RDAPYRR++ RGFS+ +LC NCKRPGH+ARECPNVAVC+NCGLPG+
Sbjct:   22 PRDRRIRSRRNSYRDAPYRRETRRGFSQSSLCNNCKRPGHFARECPNVAVCNNCGLPGH 80          
BLAST of CK149047 vs. TrEMBL
Match: Q9AV38_ORYSJ (Os10g0545300 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0001O14.4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.798e-18
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSR--DNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R+IR++R S+RDAPYRRDS RG SR  ++LC NCKRPGH+AR+CPNVA+CH CGLPG+
Sbjct:    8 PKDRRIRTERTSYRDAPYRRDSRRGPSRFPNDLCNNCKRPGHFARDCPNVALCHACGLPGH 68          
BLAST of CK149047 vs. TrEMBL
Match: A2Z9X0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34532 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.798e-18
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSSRGFSR--DNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R+IR++R S+RDAPYRRDS RG SR  ++LC NCKRPGH+AR+CPNVA+CH CGLPG+
Sbjct:    8 PKDRRIRTERTSYRDAPYRRDSRRGPSRFPNDLCNNCKRPGHFARDCPNVALCHACGLPGH 68          
BLAST of CK149047 vs. TAIR peptide
Match: AT1G75560.2 (| Symbols: | zinc knuckle (CCHC-type) family protein | chr1:28371420-28372717 REVERSE LENGTH=257)

HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-17
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSS--RGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R++RS+R S+ DAP RR+    R FS+ NLC NCKRPGH+AR+C NV+VC+NCGLPG+
Sbjct:   24 PRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNCKRPGHFARDCSNVSVCNNCGLPGH 84          
BLAST of CK149047 vs. TAIR peptide
Match: AT1G75560.1 (| Symbols: | zinc knuckle (CCHC-type) family protein | chr1:28371420-28372717 REVERSE LENGTH=257)

HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-17
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  239 PGVRKIRSDRFSFRDAPYRRDSS--RGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGY 415
            P  R++RS+R S+ DAP RR+    R FS+ NLC NCKRPGH+AR+C NV+VC+NCGLPG+
Sbjct:   24 PRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNCKRPGHFARDCSNVSVCNNCGLPGH 84          
The following BLAST results are available for this feature:
BLAST of CK149047 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D3YBE9_TRIRP2.956e-2994.92Zinc knuckle (CcHc-type) family protein OS=Trifoli... [more]
C6TNV0_SOYBN8.051e-2789.83Putative uncharacterized protein OS=Glycine max PE... [more]
C6T6L3_SOYBN8.051e-2789.83Putative uncharacterized protein (Fragment) OS=Gly... [more]
B9RHD0_RICCO4.884e-2481.36Cellular nucleic acid binding protein, putative OS... [more]
D3YBF0_TRIRP6.379e-2481.36Zinc knuckle (CcHc-type) family protein OS=Trifoli... [more]
D7U5H5_VITVI1.856e-2381.36Whole genome shotgun sequence of line PN40024, sca... [more]
B9H0X4_POPTR7.798e-2277.05Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9R835_RICCO2.508e-2072.88Cellular nucleic acid binding protein, putative OS... [more]
Q9AV38_ORYSJ1.798e-1868.85Os10g0545300 protein OS=Oryza sativa subsp. japoni... [more]
A2Z9X0_ORYSI1.798e-1868.85Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of CK149047 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G75560.21.156e-1760.66| Symbols: | zinc knuckle (CCHC-type) family prot... [more]
AT1G75560.11.156e-1760.66| Symbols: | zinc knuckle (CCHC-type) family prot... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..51
score
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 57..82
score: 8.5
NoneNo IPR availablePANTHERPTHR23002:SF11CELLULAR NUCLEIC ACID BINDING PROTEINcoord: 57..82
score: 8.5
NoneNo IPR availableSEGsegsegcoord: 11..24
score
NoneNo IPR availableSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 42..83
score: 5.4
NoneNo IPR availableSEGsegsegcoord: 4..14
score
NoneNo IPR availableSEGsegsegcoord: 4..16
score
NoneNo IPR availableSEGsegsegcoord: 30..37
score: NAcoord: 40..53
score: NAcoord: 55..70
score
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 56..71
score: 1.8
IPR001878Zinc finger, CCHC-typeSMARTSM00343no descriptioncoord: 55..71
score: 0.0
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 56..71
score: 9
IPR013084Zinc finger, CCHC retroviral-typeGENE3D4.10.60.10no descriptioncoord: 48..82
score: 3

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CK149047 ID=CK149047; Name=CK149047; organism=Cicer arietinum; type=EST; length=544bp
AAAGAAATTGTGTGCGGCTGCTGTAGATCGCACGTTAGATCTGATTATCT
TTTGTCTTTTCGCTTCAACTCCGTTCATTTCCGTCGAAGCTCTGTGTGGC
AATAAGGAGGCAGTGGCTGATTGTGTAGGTTGTGGTGGAGGTGGTTTTGC
TGATCAGTTGTGGTAGAAGTTAAGAAAGAAAGAAAAATTGAAAATGAGTT
CCGACAGCCGCAGCCGAAGCAGAAGCAGGAGTCGGAGCCCAGGGGTCCGT
AAGATTCGTTCTGATCGATTTTCCTTTCGCGATGCCCCTTACAGGAGAGA
TTCAAGTCGGGGTTTCAGCCGAGACAATTTGTGCAAGAACTGCAAGAGGC
CTGGTCATTATGCTAGAGAATGCCCTAATGTTGCCGTGTGCCACAATTGT
GGCCTCCCTGGGTATGGAATTCAATCATTGTATTTTTTTGGAACTGAGCC
TGTTATTCTTTGTTGGTTGCTGCTCTGAACTATAGGTGTTTGATTTCATT
AGTTGAAAGATTATTTAGTAAATTATTGGGTATGAGGGGGGCTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR013084Zinc finger, CCHC retroviral-type