FE669183

EST Overview


Name	FE669183
Unique Name	FE669183
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	576

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of FE669183 vs. SwissProt
Match: PSB28_ORYSJ (Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 4.709e-53
Identity = 110/178 (61.80%), Postives = 129/178 (72.47%), Query Frame = 1

Query:   28 ATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            A + +LA++SP+    +PR     SS                LQ  R +   + +  P    V+M A+P IQFIQGTDE TIPDV+LTKSRDGTNG+AIF FDQPSVFDSS E+GDITGFYMID+EGVLQSVDV+AK VNGKP+ IEAKY+MRTPR+WDRFMRFMERYS AN LQFVK
Sbjct:    3 AVMKALAVASPISARAQPRRCPAGSSGGPSQSLHSSFGGVS-LQCRRTKPASLHRSRPSMQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVK 179

[Close]

BLAST of FE669183 vs. SwissProt
Match: PSB28_ARATH (Photosystem II reaction center PSB28 protein, chloroplastic OS=Arabidopsis thaliana GN=PSB28 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.857e-50
Identity = 96/137 (70.07%), Postives = 114/137 (83.21%), Query Frame = 1

Query:  154 LQVPRLRLPMITQKTPMY-MPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            + +PR +    T   PM  + + MM KP +QFIQGTDE+TIPDVKLT+SRDG+NGMA+F FDQPSVFDSSGEVG+ITG YMIDEEGV+QS DVNA+ VNGKP GI AK+IMR+P++WDRFMRFMERYS+ N LQFVK
Sbjct:   45 VSLPRAQPSSRTALRPMKPVSITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVK 181

[Close]

BLAST of FE669183 vs. SwissProt
Match: PSB28_GUITH (Photosystem II reaction center psb28 protein OS=Guillardia theta GN=psb28 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.575e-32
Identity = 69/109 (63.30%), Postives = 81/109 (74.31%), Query Frame = 1

Query:  238 IQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEV-GDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            IQFIQG +E  IPDV+LT+SRDG+ G A FRF  P V ++   V G+ITG Y+IDEEG L + DVNA+ VNGKP GIEA YIM++  DWDRFMRFMERYS  N L F K
Sbjct:    4 IQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQLVTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGLSFTK 112

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BLAST of FE669183 vs. SwissProt
Match: PSB28_ODOSI (Photosystem II reaction center psb28 protein OS=Odontella sinensis GN=psb28 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.057e-32
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 1

Query:  235 KIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFD-SSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            KIQFI+G DE  +PDV+LT+SRDG+ G A FRF  P++ D S+ + G+ITG Y+ID+EG L++ DVNA+ +NGKP  IE+ YIM++P  WDRFMRFMERY  +N L F K
Sbjct:    4 KIQFIKGLDEKVLPDVRLTRSRDGSTGTATFRFKNPNILDKSTAKEGEITGMYLIDQEGTLETRDVNAQFINGKPEAIESIYIMKSPEAWDRFMRFMERYGESNGLVFTK 113

[Close]

BLAST of FE669183 vs. SwissProt
Match: PSB28_PHATR (Photosystem II reaction center psb28 protein OS=Phaeodactylum tricornutum GN=psb28 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.686e-32
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 1

Query:  235 KIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFD-SSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            KIQFI+G DE  +PDV+LT+S+DG+ G A FRF  P++ D ++ + G+ITG Y+IDEEG+L++ DVNA+ VNGKP  IE+ YIM++P  WDRFMRFMERY   N L F K
Sbjct:    4 KIQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDEEGILETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFMERYGETNGLVFSK 113

[Close]

BLAST of FE669183 vs. SwissProt
Match: PSB28_OSTTA (Photosystem II reaction center psb28 protein, chloroplastic OS=Ostreococcus tauri GN=psb28 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.741e-31
Identity = 62/108 (57.41%), Postives = 83/108 (76.85%), Query Frame = 1

Query:  238 IQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            IQF++G +E  +P+V+LT+S+DG+NG A F F  P VF++    GDITG ++ DEEG + +VDVNAK VNGKP+GIEA+Y+M+T  DW+RFMRFMERY+  N L F K
Sbjct:   41 IQFVKGQNETAVPEVRLTRSKDGSNGTAFFIFSDPDVFENGQ--GDITGMFLTDEEGEMSTVDVNAKFVNGKPTGIEARYVMKTEADWNRFMRFMERYAEDNGLGFSK 146

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BLAST of FE669183 vs. SwissProt
Match: PSB28_CYAPA (Photosystem II reaction center psb28 protein OS=Cyanophora paradoxa GN=psb28 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.879e-31
Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 1

Query:  235 KIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            KIQFIQG DE  IPDVKL++S+DG NG+A F FD+P+VFD     G+ITG Y+IDEEG L +  V AK +NGKP  IEA YIM    +W+RF+RFMERY+  NDL F K
Sbjct:    3 KIQFIQGVDEEAIPDVKLSRSQDGANGIAKFYFDKPTVFDVYQ--GEITGLYLIDEEGELSTRTVYAKFINGKPQSIEASYIMNNREEWERFIRFMERYAKQNDLSFTK 109

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BLAST of FE669183 vs. SwissProt
Match: PSB28_PORYE (Photosystem II reaction center psb28 protein OS=Porphyra yezoensis GN=psb28 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.514e-30
Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 1

Query:  238 IQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSS-GEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            IQFIQG +E  +PDV+LT+SRDG+ G A FRF  P + D+S  + G+ITG Y++D EG + + DVNAK +NGKP  IEA +++++P DWDRFMRFMERY+  N L F K
Sbjct:    4 IQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQIITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGLTFTK 112

[Close]

BLAST of FE669183 vs. SwissProt
Match: PSB28_PORPU (Photosystem II reaction center psb28 protein OS=Porphyra purpurea GN=psb28 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.514e-30
Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 1

Query:  238 IQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSS-GEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            IQFIQG +E  +PDV+LT+SRDG+ G A FRF  P + D+S  + G+ITG Y++D EG + + DVNAK +NGKP  IEA +++++P DWDRFMRFMERY+  N L F K
Sbjct:    4 IQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQIITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGLTFTK 112

[Close]

BLAST of FE669183 vs. SwissProt
Match: PSB28_THAPS (Photosystem II reaction center psb28 protein OS=Thalassiosira pseudonana GN=psb28 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.554e-30
Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 1

Query:  235 KIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEV-GDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            +IQFI+G DE  +PDV+LT+SRDG+ G A F F   ++ + S  + G+ITG YMIDEEG+L++ DV+A+ VNGKP  +E+ YIM++P  WDRFMRFMERY  +N L F K
Sbjct:    4 RIQFIKGIDEKVLPDVRLTRSRDGSTGTATFLFKNANLINKSLALNGEITGMYMIDEEGILETRDVSARFVNGKPQAVESIYIMKSPEAWDRFMRFMERYGESNGLAFTK 113

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BLAST of FE669183 vs. TrEMBL
Match: C6SZM2_SOYBN (Photosystem II reaction center psb28 protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.657e-71
Identity = 141/180 (78.33%), Postives = 153/180 (85.00%), Query Frame = 1

Query:   25 MATLHSLALSSPLYK-IQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            MATLHSLALSSPL   +QKPRS +VPSSIV            Q L +P LRLP++ Q TPM+MPVIMM KPKIQFIQGTDE TIPDV+LTKSRDGTNGMAIF FDQPSVFDSSGE+GDITGFYMIDEEGVLQSVDV+AK VNGKPS IEAKY+MR+PRDWDRFMRFMERYSNAN LQF+K
Sbjct:    1 MATLHSLALSSPLSNSLQKPRSCAVPSSIVHQSTNSSFNG--QTLHLPCLRLPVLRQNTPMHMPVIMMVKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPRDWDRFMRFMERYSNANGLQFIK 178

[Close]

BLAST of FE669183 vs. TrEMBL
Match: A9PHJ0_POPTR (Photosystem II reaction center psb28 protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.681e-58
Identity = 122/181 (67.40%), Postives = 137/181 (75.69%), Query Frame = 1

Query:   25 MATLHSLALSSPL--YKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            MATL SLAL+SP+  +   + RS+S   S              Q L +PRLRLP+I +K      V MM KP IQF+QG DE T+PDV+LTKSRDGTNGMAIF FDQPSVFDSS EVGDITGFYMIDEEG+LQSVDVNAK VNGKP  IEAKYIMRTPR+WDRFMRFME+Y+NAN LQFVK
Sbjct:    1 MATLQSLALASPVAQHLQHQTRSFSGSGSWAVNKSSYSLFNG-QSLCLPRLRLPLIRRKLRTSGLVTMMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMEKYANANGLQFVK 180

[Close]

BLAST of FE669183 vs. TrEMBL
Match: D7U379_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028434001 PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.409e-54
Identity = 114/179 (63.69%), Postives = 131/179 (73.18%), Query Frame = 1

Query:   25 MATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            MA L SLA +SPL    K    S  SS                L +PR +   + + +     + MM KP IQFIQGTDE T+PDV+LT+SRDGTNGMAIF+F+QPSVFDSSGEVGDITGFYMIDEEGVLQSVDV+AK +NGKPSGIEAKY+MR+PR+WDRFMRFMERYSN N LQFVK
Sbjct:    1 MAALQSLAFTSPLSHCCKQSPLSGLSSWAVHRSAHSSFNGRS-LHLPRPQWAALKRSSSTSGLITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFMERYSNENGLQFVK 178

[Close]

BLAST of FE669183 vs. TrEMBL
Match: B9SKL9_RICCO (Photosystem II reaction center psb28 protein OS=Ricinus communis GN=RCOM_0542030 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.658e-53
Identity = 114/180 (63.33%), Postives = 134/180 (74.44%), Query Frame = 1

Query:   25 MATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXX-QYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            MATL SLA +SP+      ++ S P S               + L++   +L    QK+  +  + MMAKP IQFIQGTDE TIPDV+LTKSRDGTNGMAIF FD+PSVFDSS E+GDITGFYMIDEEGVLQSVDV+AK VNGKP+ IEAKY+MR+PR+WDRFMRFMERY+NAN LQFVK
Sbjct:    1 MATLQSLAFASPVSHYSH-QTRSFPGSFCWAVHRIARSPFSGKSLRLSHPQLTSTRQKSSRF--ITMMAKPSIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDEPSVFDSSAELGDITGFYMIDEEGVLQSVDVSAKFVNGKPARIEAKYVMRSPREWDRFMRFMERYANANGLQFVK 177

[Close]

BLAST of FE669183 vs. TrEMBL
Match: A3A1D0_ORYSJ (Photosystem II reaction center psb28 protein OS=Oryza sativa subsp. japonica GN=OsJ_04705 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.547e-52
Identity = 110/178 (61.80%), Postives = 129/178 (72.47%), Query Frame = 1

Query:   28 ATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            A + +LA++SP+    +PR     SS                LQ  R +   + +  P    V+M A+P IQFIQGTDE TIPDV+LTKSRDGTNG+AIF FDQPSVFDSS E+GDITGFYMID+EGVLQSVDV+AK VNGKP+ IEAKY+MRTPR+WDRFMRFMERYS AN LQFVK
Sbjct:    3 AVMKALAVASPISARAQPRRCPAGSSGGPSQSLHSSFGGVS-LQCRRTKPASLHRSRPSMQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVK 179

[Close]

BLAST of FE669183 vs. TrEMBL
Match: A2WYW0_ORYSI (Photosystem II reaction center psb28 protein OS=Oryza sativa subsp. indica GN=OsI_05122 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.547e-52
Identity = 110/178 (61.80%), Postives = 129/178 (72.47%), Query Frame = 1

Query:   28 ATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            A + +LA++SP+    +PR     SS                LQ  R +   + +  P    V+M A+P IQFIQGTDE TIPDV+LTKSRDGTNG+AIF FDQPSVFDSS E+GDITGFYMID+EGVLQSVDV+AK VNGKP+ IEAKY+MRTPR+WDRFMRFMERYS AN LQFVK
Sbjct:    3 AVMKALAVASPISARAQPRRCPAGSSGGPSQSLHSSFGGVS-LQCRRTKPASLHRSRPSVQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVK 179

[Close]

BLAST of FE669183 vs. TrEMBL
Match: B9GRD0_POPTR (Photosystem II reaction center psb28 protein OS=Populus trichocarpa GN=POPTRDRAFT_799516 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.905e-51
Identity = 98/114 (85.96%), Postives = 104/114 (91.23%), Query Frame = 1

Query:  220 MMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            MM KP IQF+QG DE T+PDV+LTKSRDGTNGMAIF FDQPSVFDSS EVGDITGFYMIDEEG+LQSVDVNAK VNGKP  IEAKYIMRTPR+WDRFMRFMERY+NAN LQFVK
Sbjct:    1 MMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMERYANANGLQFVK 114

[Close]

BLAST of FE669183 vs. TrEMBL
Match: B6SRI0_MAIZE (Photosystem II reaction center psb28 protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.128e-50
Identity = 109/183 (59.56%), Postives = 130/183 (71.04%), Query Frame = 1

Query:   16 LLAMATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMA-KPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            + A+A + +LA+++     ++PR Y V                 Q    PR   P   ++ P    V+  A +P IQFIQGTDE TIPDV+LTKSRDGTNG+AIF F+QPSVFDSS E+GDITGFYMID+EGVLQSVDV+AK VNGKP+ IEAKY+MRTPRDWDRFMRFMERYS AN LQFVK
Sbjct:    1 MAAVAAMKALAVAASPVSARQPRRY-VAGGASRRLQSPFHGVSVQCPGRPRRATP---RRGPQVAVVVAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 179

[Close]

BLAST of FE669183 vs. TrEMBL
Match: C5XHQ4_SORBI (Photosystem II reaction center psb28 protein OS=Sorghum bicolor GN=Sb03g045320 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.045e-49
Identity = 96/116 (82.76%), Postives = 106/116 (91.38%), Query Frame = 1

Query:  214 VIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            V+M A+P IQFIQGTDE TIPDV+LTKSRDGTNG+AIF F+QPSVFDSS E+GDITG YMID+EGVLQSVDV+AK VNGKP+ IEAKY+MRTPRDWDRFMRFMERYS AN LQFVK
Sbjct:   60 VMMAARPSIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGLYMIDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 175

[Close]

BLAST of FE669183 vs. TrEMBL
Match: B6TYC5_MAIZE (Photosystem II reaction center psb28 protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.783e-49
Identity = 107/182 (58.79%), Postives = 128/182 (70.33%), Query Frame = 1

Query:   16 LLAMATLHSLALSSPLYKIQKPRSYSVPSSIVXXXXXXXXXXXXQYLQVPRLRLPMITQKTPMYMPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            + A+A + +LA+++     ++PR Y V                 Q    PR   P   ++  +   V    +P IQFIQGTDE TIPDV+LTKSRDGTNG+AIF F+QPSVFDSS E+GDITGFYMID+EGVLQSVDV+AK VNGKP+ IEAKY+MRTPRDWDRFMRFMERYS AN LQFVK
Sbjct:    1 MAAVAAMKALAVAASPVSARQPRRY-VAGGASRRLQSPFHGVSVQCPGRPRRATPRRGRQVAV---VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 178

[Close]

BLAST of FE669183 vs. TAIR peptide
Match: AT4G28660.2 (| Symbols: PSB28 | photosystem II reaction center PSB28 protein | chr4:14150008-14150933 FORWARD LENGTH=198)

HSP 1 Score: 197.978 bits (502), Expect = 3.029e-51
Identity = 96/137 (70.07%), Postives = 114/137 (83.21%), Query Frame = 1

Query:  154 LQVPRLRLPMITQKTPMY-MPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            + +PR +    T   PM  + + MM KP +QFIQGTDE+TIPDVKLT+SRDG+NGMA+F FDQPSVFDSSGEVG+ITG YMIDEEGV+QS DVNA+ VNGKP GI AK+IMR+P++WDRFMRFMERYS+ N LQFVK
Sbjct:   60 VSLPRAQPSSRTALRPMKPVSITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVK 196

[Close]

BLAST of FE669183 vs. TAIR peptide
Match: AT4G28660.1 (| Symbols: PSB28 | photosystem II reaction center PSB28 protein | chr4:14150008-14150933 FORWARD LENGTH=183)

HSP 1 Score: 197.978 bits (502), Expect = 3.029e-51
Identity = 96/137 (70.07%), Postives = 114/137 (83.21%), Query Frame = 1

Query:  154 LQVPRLRLPMITQKTPMY-MPVIMMAKPKIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKXVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSNANDLQFVK 561
            + +PR +    T   PM  + + MM KP +QFIQGTDE+TIPDVKLT+SRDG+NGMA+F FDQPSVFDSSGEVG+ITG YMIDEEGV+QS DVNA+ VNGKP GI AK+IMR+P++WDRFMRFMERYS+ N LQFVK
Sbjct:   45 VSLPRAQPSSRTALRPMKPVSITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVK 181

The following BLAST results are available for this feature:

BLAST of FE669183 vs. SwissProt
BLAST of FE669183 vs. TrEMBL
BLAST of FE669183 vs. TAIR peptide

BLAST of FE669183 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PSB28_ORYSJ	4.709e-53	61.80	Photosystem II reaction center PSB28 protein, chlo...	[more]
PSB28_ARATH	2.857e-50	70.07	Photosystem II reaction center PSB28 protein, chlo...	[more]
PSB28_GUITH	1.575e-32	63.30	Photosystem II reaction center psb28 protein OS=Gu...	[more]
PSB28_ODOSI	2.057e-32	58.18	Photosystem II reaction center psb28 protein OS=Od...	[more]
PSB28_PHATR	2.686e-32	58.18	Photosystem II reaction center psb28 protein OS=Ph...	[more]
PSB28_OSTTA	1.741e-31	57.41	Photosystem II reaction center psb28 protein, chlo...	[more]
PSB28_CYAPA	3.879e-31	60.55	Photosystem II reaction center psb28 protein OS=Cy...	[more]
PSB28_PORYE	2.514e-30	55.96	Photosystem II reaction center psb28 protein OS=Po...	[more]
PSB28_PORPU	2.514e-30	55.96	Photosystem II reaction center psb28 protein OS=Po...	[more]
PSB28_THAPS	9.554e-30	55.45	Photosystem II reaction center psb28 protein OS=Th...	[more]

BLAST of FE669183 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SZM2_SOYBN	1.657e-71	78.33	Photosystem II reaction center psb28 protein OS=Gl...	[more]
A9PHJ0_POPTR	4.681e-58	67.40	Photosystem II reaction center psb28 protein OS=Po...	[more]
D7U379_VITVI	1.409e-54	63.69	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SKL9_RICCO	2.658e-53	63.33	Photosystem II reaction center psb28 protein OS=Ri...	[more]
A3A1D0_ORYSJ	6.547e-52	61.80	Photosystem II reaction center psb28 protein OS=Or...	[more]
A2WYW0_ORYSI	6.547e-52	61.80	Photosystem II reaction center psb28 protein OS=Or...	[more]
B9GRD0_POPTR	1.905e-51	85.96	Photosystem II reaction center psb28 protein OS=Po...	[more]
B6SRI0_MAIZE	6.128e-50	59.56	Photosystem II reaction center psb28 protein OS=Ze...	[more]
C5XHQ4_SORBI	1.045e-49	82.76	Photosystem II reaction center psb28 protein OS=So...	[more]
B6TYC5_MAIZE	1.783e-49	58.79	Photosystem II reaction center psb28 protein OS=Ze...	[more]

BLAST of FE669183 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G28660.2	3.029e-51	70.07	\| Symbols: PSB28 \| photosystem II reaction center ...	[more]
AT4G28660.1	3.029e-51	70.07	\| Symbols: PSB28 \| photosystem II reaction center ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005610	Photosystem II Psb28, class 1	HAMAP	MF_01370	PSII_Psb28	coord: 77..186 score: 28
IPR005610	Photosystem II Psb28, class 1	PFAM	PF03912	Psb28	coord: 80..185 score: 3.3
IPR005610	Photosystem II Psb28, class 1	TIGRFAMs	TIGR03047	PS_II_psb28: photosystem II reaction cent	coord: 80..187 score: 5.3
None	No IPR available	SEG	seg	seg	coord: 38..49 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE669183 ID=FE669183; Name=FE669183; organism=Cicer arietinum; type=EST; length=576bp
ATTCCTCTCTCCTTTCTGCTGGCAATGGCAACTCTGCATTCTCTTGCATT
GTCCTCTCCGCTCTACAAAATTCAGAAGCCACGCTCATACTCAGTCCCTT
CTTCAATTGTCAATGGAAGCTTGAACTTAAACTCCTCATTCAATGGTCAA
TATTTACAAGTGCCTCGTTTGAGGTTACCAATGATAACACAAAAAACTCC
AATGTACATGCCAGTTATCATGATGGCGAAACCGAAAATACAGTTCATTC
AAGGAACTGATGAACTGACAATACCAGATGTGAAGCTGACAAAATCAAGG
GATGGAACAAATGGTATGGCTATCTTCAGGTTTGATCAACCCTCCGTGTT
TGATTCATCTGGAGAAGTAGGTGATATTACTGGTTTTTACATGATTGATG
AGGAAGGAGTCCTTCAATCTGTTGATGTAAATGCTAAATNTGTCAATGGA
AAGCCCTCAGGAATTGAAGCTAAGTATATAATGCGGACTCCACGCGACTG
GGATAGGTTCATGAGATTTATGGAGCGATACTCCAATGCTAATGATTTGC
AATTTGTAAAGTATTGAGTTAAATGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009654	photosystem II oxygen evolving complex
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR005610	PSII_Psb28_class-1

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