GR391257

EST Overview


Name	GR391257
Unique Name	GR391257
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	682

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR391257 vs. SwissProt
Match: TAF10_MOUSE (Transcription initiation factor TFIID subunit 10 OS=Mus musculus GN=Taf10 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.700e-14
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = -1

Query:  128 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYF 409
            YTPTIPD +  +YL ++GF+  D R+ RL+++  QKF++ IA D  QH K +  +             +  LTMEDL+ AL EYG+N++   YF
Sbjct:  126 YTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCKMKGTA--SGSSRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

[Close]

BLAST of GR391257 vs. SwissProt
Match: TAF10_HUMAN (Transcription initiation factor TFIID subunit 10 OS=Homo sapiens GN=TAF10 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.700e-14
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = -1

Query:  128 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYF 409
            YTPTIPD +  +YL ++GF+  D R+ RL+++  QKF++ IA D  QH K +  +             +  LTMEDL+ AL EYG+N++   YF
Sbjct:  126 YTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCKMKGTA--SGSSRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

[Close]

BLAST of GR391257 vs. SwissProt
Match: TAFAB_DROME (Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster GN=Taf10b PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.014e-14
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = -1

Query:  131 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKAR-QASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEY 409
            YTP IPD +  HYL   GFQ  D R+ RL+++  QK+++ I  D  QHSKAR                 +  LTMEDL  AL +YG+N+R  +Y
Sbjct:   51 YTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSKARTHMQTTNTPGGSKAKDRKFTLTMEDLQPALADYGINVRKVDY 144

[Close]

BLAST of GR391257 vs. SwissProt
Match: TAF10_SCHPO (Transcription initiation factor TFIID subunit 10 OS=Schizosaccharomyces pombe GN=taf10 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.285e-13
Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = -1

Query:  128 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQAS------------------IPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYF 409
            Y+P IPD L+++YL+ SGF+C D RL +L+ +T QKF++ +A D +Q+SK R  S                               + VLT++DLS AL EYG+NL+  ++F
Sbjct:  103 YSPLIPDVLLDYYLSLSGFKCVDPRLKKLLGLTAQKFISDVAQDAYQYSKIRTGSSNASSTTFGAQNFGAGGASGIGSSGRRGDRGKTVLTVDDLSAALNEYGINLKRPDFF 214

[Close]

BLAST of GR391257 vs. SwissProt
Match: TAF10_DROME (Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster GN=Taf10 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.254e-11
Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = -1

Query:  128 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASI------PXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYF 409
            Y+PTIPD L  H L  +GF   D ++ RLV+V+ QKF++ IA D  QH K R  +I                  +  L MEDL  AL ++G+ +R  +YF
Sbjct:   67 YSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCKTRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQYF 166

[Close]

BLAST of GR391257 vs. SwissProt
Match: TAF10_YEAST (Transcription initiation factor TFIID subunit 10 OS=Saccharomyces cerevisiae GN=TAF10 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.128e-11
Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = -1

Query:  131 PTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKAR----------------------------QASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNL-RPQEY 403
            P IPD ++++YLTK+GF   DVR+ RL+A+ TQKFV+ IA D +++S+ R                            Q S             ++VLT+ DLS A+ EYG+N+ RP  Y
Sbjct:   86 PIIPDAVIDYYLTKNGFNVADVRVKRLLALATQKFVSDIAKDAYEYSRIRSSVAVSNANNSQARARQLLQGQQQPGVQQISQQQHQQNEKTTASKVVLTVNDLSSAVAEYGLNIGRPDFY 205

[Close]

BLAST of GR391257 vs. TrEMBL
Match: C6T2A0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.400e-42
Identity = 98/139 (70.50%), Postives = 102/139 (73.38%), Query Frame = -1

Query:   83 MDQNQPQSSSSEGRPXXXXXXXXXXXXXXDYTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 499
            M QN PQSS  EGR               DYTPTIPDELVEHYL KSGFQCPDVRLTRLVAV TQKFVA++AGD  QH KARQA+IP           RLVLTMEDLSKALREYGVNL+ QEYFADSP TGMDPATREE
Sbjct:    1 MSQN-PQSS--EGRNDDDSALSDFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLTRLVAVATQKFVAEVAGDALQHCKARQATIPKDKRDKQQKDKRLVLTMEDLSKALREYGVNLKHQEYFADSPSTGMDPATREE 136

[Close]

BLAST of GR391257 vs. TrEMBL
Match: C6TCI9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.346e-42
Identity = 97/139 (69.78%), Postives = 103/139 (74.10%), Query Frame = -1

Query:   83 MDQNQPQSSSSEGRPXXXXXXXXXXXXXXDYTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 499
            M+QN PQSS  +GR               DYTPTIPDELVEHYL KSGF+CPDVRLTRLVAV TQKFVA++AGD  QH KARQA+IP           RLVLTMEDLSKALREYGVNLR QEYFADSP TGMDPATREE
Sbjct:    1 MNQN-PQSS--DGRNDDDSALSDFLASLMDYTPTIPDELVEHYLAKSGFRCPDVRLTRLVAVATQKFVAEVAGDALQHCKARQATIPKDKRDKQQKDKRLVLTMEDLSKALREYGVNLRHQEYFADSPSTGMDPATREE 136

[Close]

BLAST of GR391257 vs. TrEMBL
Match: B9RNR0_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0919930 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.043e-37
Identity = 84/142 (59.15%), Postives = 98/142 (69.01%), Query Frame = -1

Query:   83 DQKMDQNQPQSSSSEGRPXXXXXXXXXXXXXXDYTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 508
            +Q  + +Q Q  SS+GR               DYTPTIPDELVEHYL KSGFQCPDVRL RLVAV TQKFVA++A D  Q  KARQ+++            RL+LTMEDLSKAL EYGVN++ QEYFADSP TGMDPA+R+E
Sbjct:    2 NQNSNNSQQQQQSSDGRHDDDAALTEFLSSLMDYTPTIPDELVEHYLGKSGFQCPDVRLVRLVAVATQKFVAEVANDALQQCKARQSAVVKDKREKQQKDKRLILTMEDLSKALHEYGVNVKHQEYFADSPSTGMDPASRDE 143

[Close]

BLAST of GR391257 vs. TrEMBL
Match: B9ILB5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1106364 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.383e-36
Identity = 84/136 (61.76%), Postives = 91/136 (66.91%), Query Frame = -1

Query:   83 NQPQSSSSEGRPXXXXXXXXXXXXXXDYTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 490
            +Q Q  SSE R               DYTPTIPDELVEHYL KSGFQCPDVRL RLVAV TQKFVA +A D  Q  KAR A +            RL+LTMEDLSKAL EYGVN++ QEYFADSP TGMDPA+REE
Sbjct:    9 SQQQQQSSEARHDDDAVLTEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLVRLVAVATQKFVADVATDALQQCKARPAPVVKDKRDKQQKEKRLILTMEDLSKALSEYGVNVKHQEYFADSPSTGMDPASREE 144

[Close]

BLAST of GR391257 vs. TrEMBL
Match: O04173_ARATH (AT4G31720 protein OS=Arabidopsis thaliana GN=AT4G31720 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.846e-35
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPD+LVEHYL KSGFQCPDVRL RLVAV TQKFVA +A D  QH KAR A  P           RLVLTMEDLSKALREYGVN++  EYFADSP TGMDPATR+E
Sbjct:   28 YTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARPA--PVVKDKKQQKDKRLVLTMEDLSKALREYGVNVKHPEYFADSPSTGMDPATRDE 134

[Close]

BLAST of GR391257 vs. TrEMBL
Match: D7MB36_ARALY (TAFII15 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491569 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.329e-35
Identity = 78/109 (71.56%), Postives = 84/109 (77.06%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPD+LVEHYL KSGFQCPDVRL RLVAV TQKFVA +A D  QH KAR A  P           RL+LTMEDLSKALREYGVN++  EYFADSP TGMDPATR+E
Sbjct:   28 YTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARPA--PVVKDKKQQKDKRLILTMEDLSKALREYGVNVKHPEYFADSPSTGMDPATRDE 134

[Close]

BLAST of GR391257 vs. TrEMBL
Match: Q8GY69_ARATH (At4g31720 OS=Arabidopsis thaliana GN=At4g31720/F28M20_90 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.410e-34
Identity = 78/109 (71.56%), Postives = 83/109 (76.15%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPD+LVEHYL KSGFQCPDVRL RLVAV TQKFVA +A D  QH KAR A  P           RLVLTMEDLSKALREYGVN++  EYFADSP TGMDP TR+E
Sbjct:   28 YTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARPA--PVVKDKKQQKDKRLVLTMEDLSKALREYGVNVKHPEYFADSPSTGMDPVTRDE 134

[Close]

BLAST of GR391257 vs. TrEMBL
Match: Q765H9_FLATR (TATA box-binding protein associated factor 10 OS=Flaveria trinervia GN=TAF10 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.724e-32
Identity = 71/109 (65.14%), Postives = 83/109 (76.15%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPDELVEHYL KSGFQCPDVRLTRLVAV  QKFV+ IA D  QH KARQA++            RL++ MEDLSKAL+EYGVN++ QEYFAD+P  G++ A R+E
Sbjct:   28 YTPTIPDELVEHYLAKSGFQCPDVRLTRLVAVAAQKFVSDIAIDALQHCKARQAAVVRDKKEKQQRDKRLIMNMEDLSKALQEYGVNVKHQEYFADNPSAGLESAARDE 136

[Close]

BLAST of GR391257 vs. TrEMBL
Match: C5XD14_SORBI (Putative uncharacterized protein Sb02g025360 OS=Sorghum bicolor GN=Sb02g025360 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.251e-32
Identity = 74/109 (67.89%), Postives = 83/109 (76.15%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPDELVEHYL +SGF CPD+RLTRLVAV TQKF+A IA D+ QH KAR A+             RLVLTM+DLSKALRE+GVNL+  EYFADSP  GM P+TREE
Sbjct:   29 YTPTIPDELVEHYLGRSGFHCPDLRLTRLVAVATQKFLADIASDSLQHCKARVAAPIKDNKSKQPKDRRLVLTMDDLSKALREHGVNLKHPEYFADSPSAGMAPSTREE 137

[Close]

BLAST of GR391257 vs. TrEMBL
Match: B4FUQ5_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.015e-32
Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPDELVEHYL +SGF CPD+RLTRLVAV TQKF++ IA D+ QH KAR A+             RLVLTM+DLSKALRE+GVNL+  EYFADSP  GM P+TREE
Sbjct:   45 YTPTIPDELVEHYLGRSGFHCPDLRLTRLVAVATQKFLSDIASDSLQHCKARVAAPIKDNKSKQPKDRRLVLTMDDLSKALREHGVNLKHAEYFADSPSAGMAPSTREE 153

[Close]

BLAST of GR391257 vs. TAIR peptide
Match: AT4G31720.1 (| Symbols: TAFII15, TAF10, STG1 | TBP-associated factor II 15 | chr4:15354223-15355704 REVERSE LENGTH=134)

HSP 1 Score: 151.754 bits (382), Expect = 3.315e-37
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPD+LVEHYL KSGFQCPDVRL RLVAV TQKFVA +A D  QH KAR A  P           RLVLTMEDLSKALREYGVN++  EYFADSP TGMDPATR+E
Sbjct:   28 YTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARPA--PVVKDKKQQKDKRLVLTMEDLSKALREYGVNVKHPEYFADSPSTGMDPATRDE 134

[Close]

BLAST of GR391257 vs. TAIR peptide
Match: AT4G31720.2 (| Symbols: TAFII15, STG1 | TBP-associated factor II 15 | chr4:15354223-15355704 REVERSE LENGTH=134)

HSP 1 Score: 151.754 bits (382), Expect = 3.315e-37
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = -1

Query:   83 YTPTIPDELVEHYLTKSGFQCPDVRLTRLVAVTTQKFVAKIAGDTFQHSKARQASIPXXXXXXXXXXXRLVLTMEDLSKALREYGVNLRPQEYFADSPFTGMDPATREE 409
            YTPTIPD+LVEHYL KSGFQCPDVRL RLVAV TQKFVA +A D  QH KAR A  P           RLVLTMEDLSKALREYGVN++  EYFADSP TGMDPATR+E
Sbjct:   28 YTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARPA--PVVKDKKQQKDKRLVLTMEDLSKALREYGVNVKHPEYFADSPSTGMDPATRDE 134

The following BLAST results are available for this feature:

BLAST of GR391257 vs. SwissProt
BLAST of GR391257 vs. TrEMBL
BLAST of GR391257 vs. TAIR peptide

BLAST of GR391257 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
TAF10_MOUSE	2.700e-14	40.43	Transcription initiation factor TFIID subunit 10 O...	[more]
TAF10_HUMAN	2.700e-14	40.43	Transcription initiation factor TFIID subunit 10 O...	[more]
TAFAB_DROME	6.014e-14	41.49	Transcription initiation factor TFIID subunit 10b ...	[more]
TAF10_SCHPO	2.285e-13	36.61	Transcription initiation factor TFIID subunit 10 O...	[more]
TAF10_DROME	1.254e-11	38.00	Transcription initiation factor TFIID subunit 10 O...	[more]
TAF10_YEAST	8.128e-11	35.00	Transcription initiation factor TFIID subunit 10 O...	[more]

BLAST of GR391257 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T2A0_SOYBN	2.400e-42	70.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TCI9_SOYBN	5.346e-42	69.78	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9RNR0_RICCO	1.043e-37	59.15	Transcription factor, putative OS=Ricinus communis...	[more]
B9ILB5_POPTR	4.383e-36	61.76	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
O04173_ARATH	4.846e-35	72.48	AT4G31720 protein OS=Arabidopsis thaliana GN=AT4G3...	[more]
D7MB36_ARALY	6.329e-35	71.56	TAFII15 OS=Arabidopsis lyrata subsp. lyrata GN=ARA...	[more]
Q8GY69_ARATH	1.410e-34	71.56	At4g31720 OS=Arabidopsis thaliana GN=At4g31720/F28...	[more]
Q765H9_FLATR	1.724e-32	65.14	TATA box-binding protein associated factor 10 OS=F...	[more]
C5XD14_SORBI	2.251e-32	67.89	Putative uncharacterized protein Sb02g025360 OS=So...	[more]
B4FUQ5_MAIZE	5.015e-32	66.97	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of GR391257 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G31720.1	3.315e-37	72.48	\| Symbols: TAFII15, TAF10, STG1 \| TBP-associated f...	[more]
AT4G31720.2	3.315e-37	72.48	\| Symbols: TAFII15, STG1 \| TBP-associated factor I...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 49..59 score
None	No IPR available	SEG	seg	seg	coord: 25..39 score: NAcoord: 97..108 score
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PRINTS	PR01443	TFIID30KDSUB	coord: 42..58 score: 3.2e-26coord: 62..84 score: 3.2e-26coord: 108..130 score: 3.2
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PIR	PIRSF017246	Transcription initiation factor IID, TAF10 subunit	coord: 2..134 score: 7.2
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PANTHER	PTHR21242	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10	coord: 10..140 score: 1.1
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PFAM	PF03540	TFIID_30kDa	coord: 42..92 score: 2.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR391257 ID=GR391257; Name=GR391257; organism=Cicer arietinum; type=EST; length=682bp
CGACTCAATACCACATTGATATAATAAAGGCTGAACTTAAAATGTAAAAG
TCTCAACAATAATTTAAACAAGAAAGTAATCATTCTTCTCGAGTAGCAGG
ATCCATTCCAGTAAATGGGCTGTCAGCAAAATATTCTTGGGGCCTTAAAT
TCACGCCATACTCACGCAGTGCCTTCGATAAATCTTCCATAGTCAAAACT
AGGCGCTTATCCTTTTGTTGCCTGTCCCTTTTGTCTTTTGGAATTGATGC
TTGCCTTGCTTTGGAGTGCTGGAAAGTATCGCCTGCAATTTTTGCAACAA
ATTTCTGAGTGGTAACAGCTACCAATCTGGTCAATCGAACATCGGGACAT
TGAAAGCCACTCTTGGTCAAGTAATGCTCTACCAACTCATCGGGTATAGT
GGGAGTATAATCCATTAAGGAAGCTAGGAAATCGGAAAGTGCAGAATCAT
CATCTGGCCTTCCTTCACTTGAACTTGATTGCGGCTGATTCTGGTCCATC
TTCTGATCAAACACTCCTTGCTCTTGTTACTGCCAATGTGAGGAAAAATG
AGTTGAACTTACAAATTGAGAGATGAAAATTAAAGTTTTCGAATTGAATT
TCCCCGCGGAACTCTGCGGTGAAACCAAGTTTTAATCTATATTGAAAATC
CCGCCTTCCCTTTGGTTCAACATTTGGCGAAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003702	obsolete RNA polymerase II transcription factor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006352	DNA-templated transcription initiation

Vocabulary: **INTERPRO**
Term	Definition
IPR003923	TFIID_30kDa

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