GR400492

EST Overview
NameGR400492
Unique NameGR400492
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length477
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR400492 vs. TrEMBL
Match: C7YSJ5_NECH7 (Putative uncharacterized protein OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=NECHADRAFT_73723 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.057e-23
Identity = 45/58 (77.59%), Postives = 48/58 (82.76%), Query Frame = 1
Query:   61 KGCKPGTYSCTPDKTGWQVCDVNGKYVAAGVCPPKTSCVFYKPSGSPYCVPPGFKFPK 234
            KGC PGTYSCT D  GWQVCDV   +V AG+CPPKT CVFYKPS SPYCVPPGFKFP+
Sbjct:   21 KGCTPGTYSCTGDLKGWQVCDVTRNWVFAGICPPKTGCVFYKPSNSPYCVPPGFKFPQ 78          
BLAST of GR400492 vs. TrEMBL
Match: D1Z4M5_SORMA (Whole genome shotgun sequence assembly, scaffold_4 OS=Sordaria macrospora GN=SMAC_01295 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.069e-13
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 1
Query:   40 TPLDASTKGCKPGTYSCTPDKT----GWQVCDVNGKYVAAGVCPPKTSCVFYKPSGSPYCVP 213
            TP   +   CKP TY+C  + +    GWQVCDV  K+V AG CPPKTSC F + +GSPYC+P
Sbjct:   17 TPTGTNPPQCKPATYACAKNPSTHAEGWQVCDVTSKWVYAGDCPPKTSCQFLEANGSPYCIP 78          
BLAST of GR400492 vs. TrEMBL
Match: Q7SI44_NEUCR (Predicted protein OS=Neurospora crassa GN=B22I21.030 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 1
Query:   40 TPLDASTKGCKPGTYSCTPDKT----GWQVCDVNGKYVAAGVCPPKTSCVFYKPSGSPYCVP 213
            +P   +   C P TYSC  +      GWQVCDV+ K+V AG CPPKT C F + +GSPYC+P
Sbjct:   17 SPTGTNPPQCTPATYSCAKNPNTHAEGWQVCDVDSKWVYAGDCPPKTVCKFLEANGSPYCIP 78          
BLAST of GR400492 vs. TrEMBL
Match: Q2H549_CHAGB (Predicted protein OS=Chaetomium globosum GN=CHGG_06216 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.183e-7
Identity = 24/50 (48.00%), Postives = 29/50 (58.00%), Query Frame = 1
Query:   64 GCKPGTYSCTPDKTGWQVCDVNGKYVAAGVCPPKTSCVFYKPSGSPYCVP 213
            GC+PG YSCT    GW+VC  +G +V AG C     C     + SPYCVP
Sbjct:   69 GCRPGAYSCTTTGNGWRVCGASGHWVYAGYCGWNQHCQMNWQNQSPYCVP 118          
The following BLAST results are available for this feature:
BLAST of GR400492 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C7YSJ5_NECH77.057e-2377.59Putative uncharacterized protein OS=Nectria haemat... [more]
D1Z4M5_SORMA5.069e-1353.23Whole genome shotgun sequence assembly, scaffold_4... [more]
Q7SI44_NEUCR1.631e-1150.00Predicted protein OS=Neurospora crassa GN=B22I21.0... [more]
Q2H549_CHAGB3.183e-748.00Predicted protein OS=Chaetomium globosum GN=CHGG_0... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..13
score
NoneNo IPR availableSEGsegsegcoord: 3..25
score
NoneNo IPR availableSEGsegsegcoord: 121..149
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR400492 ID=GR400492; Name=GR400492; organism=Cicer arietinum; type=EST; length=477bp
GCGGGTGCCCTCGCTGCTCTCGTCTCCCTGGCTGCTGCCACTCCCCTTGA
TGCTTCCACCAAGGGCTGCAAGCCCGGAACCTACTCTTGCACCCCTGACA
AGACTGGCTGGCAGGTCTGCGATGTCAACGGCAAATATGTTGCCGCCGGC
GTCTGCCCCCCCAAGACCTCTTGTGTCTTCTACAAGCCTAGCGGTAGCCC
CTACTGTGTTCCCCCTGGATTCAAGTTCCCCAAGGCTTAAGTGGTCTTTT
GATCTTATGACCTGATAGCTATGAGAGTCACTGGGTGCTCGAGACTCTCG
ACAATGTCTTCTATCTTGGTCTGATACCTGGCTTTCGAGGTTGGGTTTGG
ATTGGGAATAAACCTGTGCATTTGGCCTTTTCTTGTTTTCATGCCTTGCA
TGAGGTCCTTTCCTTAGAACGAACATTATATTTGGAACATAGGCTGGGTG
GGTTTACATTACCTTTTAGGCACTTAG
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