GR407581
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407581 vs. TrEMBL
Match: B9HB72_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819630 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.530e-47 Identity = 102/158 (64.56%), Postives = 119/158 (75.32%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDR----HDASRKRHRTHSPSGSPQQKL 463 VLPASKWAR+DDESDDEQ + ++LGLSYSSSGSEN GDG K G+NEEQRQKLRRLEVALIEYRESLEE+G+KN EE E+KV +HRKRL+ EYGLS S+ED G++R SSERRDR H++SRKRHR+ S S SPQ+KL Sbjct: 768 VLPASKWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFATDASIPTQPESGMNEEQRQKLRRLEVALIEYRESLEEQGMKNSEEFERKVAVHRKRLESEYGLSSSNEDVTGNKRISSERRDRRDDNHESSRKRHRSESRSESPQRKL 925
BLAST of GR407581 vs. TrEMBL
Match: B9RNU3_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0920760 PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.175e-44 Identity = 102/159 (64.15%), Postives = 117/159 (73.58%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXX-GLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQG-SRRTSSERRDRHD----ASRKRHRTHSPSGSPQQK 460 VLPASKWAR+DD+SDDEQ + + LGLSYSSSGSEN GDGL K G+NEEQRQKLRRLEVALIEYRESLEERG+K+ EEIE+KV HRKRLQ +YGL +SS+D G S+R SSERRDR D +SRKRHR+ S S SPQ+K Sbjct: 753 VLPASKWARDDDDSDDEQKRSSRGLGLSYSSSGSENAGDGLGKADDEMEFATDGSISVQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSAEEIERKVASHRKRLQSDYGLLDSSQDTPGNSKRASSERRDRRDDSRESSRKRHRSESSSRSPQRK 911
BLAST of GR407581 vs. TrEMBL
Match: B9IL77_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825788 PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.175e-44 Identity = 100/158 (63.29%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDR----HDASRKRHRTHSPSGSPQQKL 463 VLPASKWAR+DDESDDEQ + ++LGLSYSSSGSEN GDG K G+NEEQRQKLRRLEVALIEYRESLEERG+K+ EIE KV +HRK L+ EYGLS S+ED + SSERRDR HD+SRKRHR S S SPQ+KL Sbjct: 742 VLPASKWARDDDESDDEQKRSARDLGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSSVEIEGKVAIHRKWLESEYGLSSSNEDVTSKKSISSERRDRRSDNHDSSRKRHRNESRSESPQRKL 899
BLAST of GR407581 vs. TrEMBL
Match: D7SV56_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035985001 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.436e-42 Identity = 97/152 (63.82%), Postives = 111/152 (73.03%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGL-NEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDRHDAS----RKRHRTHSPS 442 VLPASKWAREDD+SDDEQ + + LGLSYSSSGSEN GDG K G+ NEE RQKLRRLEVALIEYRESLEERGIK+ EEIE+KV +HRKRLQ EYGLS+S+ED ++R+S+ERRDR D S RKRHR+ S S Sbjct: 735 VLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPSKADEMEFATESSIPSQPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDSNEDVSWNKRSSAERRDRRDDSRETTRKRHRSRSQS 886
BLAST of GR407581 vs. TrEMBL
Match: A5BQS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025939 PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.845e-36 Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGL-NEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDRHDASRKRHRTHSP 439 VLPASKWAREDD+SDDEQ + + LGLSYSSSGSEN GDG K G+ NEE RQKLRRLEVALIEYRESLEERGIK+ EEIE+KV +HRKRLQ EYGLS+S+ED ++ + R + AS+ + + +P Sbjct: 918 VLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPXKADEMEFATESSIPSQPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDSNEDVSWNKGRGAPGRWKTSASKLKSISVAP 1064
BLAST of GR407581 vs. TrEMBL
Match: Q6ETK6_ORYSJ (Putative U2-associated SR140 protein OS=Oryza sativa subsp. japonica GN=P0544B02.29-2 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.789e-35 Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460 VLPASKW+REDD SDDE KGG+ LGLSYSS GS+ GD L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV HR+RLQ EYGLS S DG SR RTSSERRDRH D+SRKRHR+ S S SP ++ Sbjct: 745 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSERRDRHDDSSRKRHRSLSRSRSPPRR 898
BLAST of GR407581 vs. TrEMBL
Match: Q6ETK5_ORYSJ (RNA recognition motif (RRM)-containing protein-like OS=Oryza sativa subsp. japonica GN=P0544B02.29-1 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.789e-35 Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460 VLPASKW+REDD SDDE KGG+ LGLSYSS GS+ GD L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV HR+RLQ EYGLS S DG SR RTSSERRDRH D+SRKRHR+ S S SP ++ Sbjct: 380 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSERRDRHDDSSRKRHRSLSRSRSPPRR 533
BLAST of GR407581 vs. TrEMBL
Match: Q0E3D7_ORYSJ (Os02g0179900 protein OS=Oryza sativa subsp. japonica GN=Os02g0179900 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.789e-35 Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460 VLPASKW+REDD SDDE KGG+ LGLSYSS GS+ GD L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV HR+RLQ EYGLS S DG SR RTSSERRDRH D+SRKRHR+ S S SP ++ Sbjct: 94 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSERRDRHDDSSRKRHRSLSRSRSPPRR 247
BLAST of GR407581 vs. TrEMBL
Match: B8AIW7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06097 PE=4 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.440e-35 Identity = 89/158 (56.33%), Postives = 109/158 (68.99%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460 VLPASKW+REDD SDDE KGG+ LGLSYSS GS+ GD L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV HR+RLQ EYGLS S DG SR RT+SERRDRH D+SRKRHR+ S S SP ++ Sbjct: 788 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTTSERRDRHDDSSRKRHRSLSRSRSPPRR 941
BLAST of GR407581 vs. TrEMBL
Match: B9F3E1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05621 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.440e-34 Identity = 89/155 (57.42%), Postives = 107/155 (69.03%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSP 451 VLPASKW+REDD SDDE KGG+ LGLSYSS GS+ GD L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV HR+RLQ EYGLS S DG SR RTSS+RRDRH D+SRKRHR+ S S SP Sbjct: 781 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSDRRDRHDDSSRKRHRSLSRSRSP 931
BLAST of GR407581 vs. TAIR peptide
Match: AT5G25060.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr5:8634219-8639984 REVERSE LENGTH=946) HSP 1 Score: 134.42 bits (337), Expect = 5.560e-32 Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR---RTSSERRDRHDASRKRHRTHSPSGSPQQK 460 +LPASKWAR+DDE+DDEQ + SSSGS+N G K G++EEQRQK RR+EVALIEYRE+LEE+G+KN EEIE+KV ++RKRL+V+YGLS +E + + +R D ++S+KRHR + S SP +K Sbjct: 737 ILPASKWARDDDEADDEQKRS--------SSSGSDNTGGITFKADGEDLKGNDCVRAQPDNGMDEEQRQKRRRIEVALIEYRETLEEQGMKNPEEIERKVEINRKRLEVDYGLSGPNEGNRNQKSIIERKEKREDSQESSKKRHRGENKSQSPPRK 884
BLAST of GR407581 vs. TAIR peptide
Match: AT5G10800.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr5:3412898-3418382 REVERSE LENGTH=947) HSP 1 Score: 119.013 bits (297), Expect = 2.418e-27 Identity = 77/159 (48.43%), Postives = 97/159 (61.01%), Query Frame = 2 Query: 2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERR----DRHDASRKRHRTHSP--SGSPQQK 460 +LP S+WAREDDE+DDEQ K SYSS GS+N G K ++ EQRQKLR +E+ALIEYRESLEE+G+KN EEIE+KV +HRKRL+ + GLS G++R E+R D D+SRKR+R+ S S SP QK Sbjct: 744 ILPTSRWAREDDETDDEQKK-------SYSS-GSDNAGGITFKTDEEDLKADPSVRVQPENEIDVEQRQKLRHIEIALIEYRESLEEQGMKNSEEIERKVAIHRKRLEAD-GLS-------GNQRVLPEKREKREDSRDSSRKRNRSESQNRSQSPPQK 886 The following BLAST results are available for this feature:
BLAST of GR407581 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR407581 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407581 ID=GR407581; Name=GR407581; organism=Cicer arietinum; type=EST; length=689bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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