GR407581

EST Overview
NameGR407581
Unique NameGR407581
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length689
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
KEGG analysis for Cicer arietinum unigene v12011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR407581 vs. TrEMBL
Match: B9HB72_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819630 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.530e-47
Identity = 102/158 (64.56%), Postives = 119/158 (75.32%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDR----HDASRKRHRTHSPSGSPQQKL 463
            VLPASKWAR+DDESDDEQ +  ++LGLSYSSSGSEN GDG  K                  G+NEEQRQKLRRLEVALIEYRESLEE+G+KN EE E+KV +HRKRL+ EYGLS S+ED  G++R SSERRDR    H++SRKRHR+ S S SPQ+KL
Sbjct:  768 VLPASKWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFATDASIPTQPESGMNEEQRQKLRRLEVALIEYRESLEEQGMKNSEEFERKVAVHRKRLESEYGLSSSNEDVTGNKRISSERRDRRDDNHESSRKRHRSESRSESPQRKL 925          
BLAST of GR407581 vs. TrEMBL
Match: B9RNU3_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0920760 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.175e-44
Identity = 102/159 (64.15%), Postives = 117/159 (73.58%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXX-GLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQG-SRRTSSERRDRHD----ASRKRHRTHSPSGSPQQK 460
            VLPASKWAR+DD+SDDEQ +  + LGLSYSSSGSEN GDGL K                   G+NEEQRQKLRRLEVALIEYRESLEERG+K+ EEIE+KV  HRKRLQ +YGL +SS+D  G S+R SSERRDR D    +SRKRHR+ S S SPQ+K
Sbjct:  753 VLPASKWARDDDDSDDEQKRSSRGLGLSYSSSGSENAGDGLGKADDEMEFATDGSISVQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSAEEIERKVASHRKRLQSDYGLLDSSQDTPGNSKRASSERRDRRDDSRESSRKRHRSESSSRSPQRK 911          
BLAST of GR407581 vs. TrEMBL
Match: B9IL77_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825788 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.175e-44
Identity = 100/158 (63.29%), Postives = 113/158 (71.52%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDR----HDASRKRHRTHSPSGSPQQKL 463
            VLPASKWAR+DDESDDEQ +  ++LGLSYSSSGSEN GDG  K                  G+NEEQRQKLRRLEVALIEYRESLEERG+K+  EIE KV +HRK L+ EYGLS S+ED    +  SSERRDR    HD+SRKRHR  S S SPQ+KL
Sbjct:  742 VLPASKWARDDDESDDEQKRSARDLGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSSVEIEGKVAIHRKWLESEYGLSSSNEDVTSKKSISSERRDRRSDNHDSSRKRHRNESRSESPQRKL 899          
BLAST of GR407581 vs. TrEMBL
Match: D7SV56_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035985001 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.436e-42
Identity = 97/152 (63.82%), Postives = 111/152 (73.03%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGL-NEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDRHDAS----RKRHRTHSPS 442
            VLPASKWAREDD+SDDEQ +  + LGLSYSSSGSEN GDG  K                  G+ NEE RQKLRRLEVALIEYRESLEERGIK+ EEIE+KV +HRKRLQ EYGLS+S+ED   ++R+S+ERRDR D S    RKRHR+ S S
Sbjct:  735 VLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPSKADEMEFATESSIPSQPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDSNEDVSWNKRSSAERRDRRDDSRETTRKRHRSRSQS 886          
BLAST of GR407581 vs. TrEMBL
Match: A5BQS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025939 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.845e-36
Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGL-NEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERRDRHDASRKRHRTHSP 439
            VLPASKWAREDD+SDDEQ +  + LGLSYSSSGSEN GDG  K                  G+ NEE RQKLRRLEVALIEYRESLEERGIK+ EEIE+KV +HRKRLQ EYGLS+S+ED   ++   +  R +  AS+ +  + +P
Sbjct:  918 VLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPXKADEMEFATESSIPSQPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDSNEDVSWNKGRGAPGRWKTSASKLKSISVAP 1064          
BLAST of GR407581 vs. TrEMBL
Match: Q6ETK6_ORYSJ (Putative U2-associated SR140 protein OS=Oryza sativa subsp. japonica GN=P0544B02.29-2 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.789e-35
Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460
            VLPASKW+REDD SDDE  KGG+ LGLSYSS GS+  GD                       L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV  HR+RLQ EYGLS  S DG  SR    RTSSERRDRH D+SRKRHR+ S S SP ++
Sbjct:  745 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSERRDRHDDSSRKRHRSLSRSRSPPRR 898          
BLAST of GR407581 vs. TrEMBL
Match: Q6ETK5_ORYSJ (RNA recognition motif (RRM)-containing protein-like OS=Oryza sativa subsp. japonica GN=P0544B02.29-1 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.789e-35
Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460
            VLPASKW+REDD SDDE  KGG+ LGLSYSS GS+  GD                       L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV  HR+RLQ EYGLS  S DG  SR    RTSSERRDRH D+SRKRHR+ S S SP ++
Sbjct:  380 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSERRDRHDDSSRKRHRSLSRSRSPPRR 533          
BLAST of GR407581 vs. TrEMBL
Match: Q0E3D7_ORYSJ (Os02g0179900 protein OS=Oryza sativa subsp. japonica GN=Os02g0179900 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.789e-35
Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460
            VLPASKW+REDD SDDE  KGG+ LGLSYSS GS+  GD                       L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV  HR+RLQ EYGLS  S DG  SR    RTSSERRDRH D+SRKRHR+ S S SP ++
Sbjct:   94 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSERRDRHDDSSRKRHRSLSRSRSPPRR 247          
BLAST of GR407581 vs. TrEMBL
Match: B8AIW7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06097 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.440e-35
Identity = 89/158 (56.33%), Postives = 109/158 (68.99%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSPQQK 460
            VLPASKW+REDD SDDE  KGG+ LGLSYSS GS+  GD                       L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV  HR+RLQ EYGLS  S DG  SR    RT+SERRDRH D+SRKRHR+ S S SP ++
Sbjct:  788 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTTSERRDRHDDSSRKRHRSLSRSRSPPRR 941          
BLAST of GR407581 vs. TrEMBL
Match: B9F3E1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05621 PE=4 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.440e-34
Identity = 89/155 (57.42%), Postives = 107/155 (69.03%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR----RTSSERRDRH-DASRKRHRTHSPSGSP 451
            VLPASKW+REDD SDDE  KGG+ LGLSYSS GS+  GD                       L+EE R+KLR++E+A+++YRESLEE+G++N EEIEKKV  HR+RLQ EYGLS  S DG  SR    RTSS+RRDRH D+SRKRHR+ S S SP
Sbjct:  781 VLPASKWSREDDVSDDEDRKGGRGLGLSYSS-GSDIAGDS--GKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLS-FSNDGANSRRSSERTSSDRRDRHDDSSRKRHRSLSRSRSP 931          
BLAST of GR407581 vs. TAIR peptide
Match: AT5G25060.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr5:8634219-8639984 REVERSE LENGTH=946)

HSP 1 Score: 134.42 bits (337), Expect = 5.560e-32
Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSR---RTSSERRDRHDASRKRHRTHSPSGSPQQK 460
            +LPASKWAR+DDE+DDEQ +         SSSGS+N G    K                  G++EEQRQK RR+EVALIEYRE+LEE+G+KN EEIE+KV ++RKRL+V+YGLS  +E  +  +       +R D  ++S+KRHR  + S SP +K
Sbjct:  737 ILPASKWARDDDEADDEQKRS--------SSSGSDNTGGITFKADGEDLKGNDCVRAQPDNGMDEEQRQKRRRIEVALIEYRETLEEQGMKNPEEIERKVEINRKRLEVDYGLSGPNEGNRNQKSIIERKEKREDSQESSKKRHRGENKSQSPPRK 884          
BLAST of GR407581 vs. TAIR peptide
Match: AT5G10800.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr5:3412898-3418382 REVERSE LENGTH=947)

HSP 1 Score: 119.013 bits (297), Expect = 2.418e-27
Identity = 77/159 (48.43%), Postives = 97/159 (61.01%), Query Frame = 2
Query:    2 VLPASKWAREDDESDDEQTKGGKNLGLSYSSSGSENVGDGLIKXXXXXXXXXXXXXXXXXXGLNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSESSEDGQGSRRTSSERR----DRHDASRKRHRTHSP--SGSPQQK 460
            +LP S+WAREDDE+DDEQ K       SYSS GS+N G    K                   ++ EQRQKLR +E+ALIEYRESLEE+G+KN EEIE+KV +HRKRL+ + GLS       G++R   E+R    D  D+SRKR+R+ S   S SP QK
Sbjct:  744 ILPTSRWAREDDETDDEQKK-------SYSS-GSDNAGGITFKTDEEDLKADPSVRVQPENEIDVEQRQKLRHIEIALIEYRESLEEQGMKNSEEIERKVAIHRKRLEAD-GLS-------GNQRVLPEKREKREDSRDSSRKRNRSESQNRSQSPPQK 886          
The following BLAST results are available for this feature:
BLAST of GR407581 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HB72_POPTR2.530e-4764.56Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RNU3_RICCO1.175e-4464.15RNA binding protein, putative OS=Ricinus communis ... [more]
B9IL77_POPTR1.175e-4463.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SV56_VITVI1.436e-4263.82Whole genome shotgun sequence of line PN40024, sca... [more]
A5BQS1_VITVI5.845e-3657.82Putative uncharacterized protein OS=Vitis vinifera... [more]
Q6ETK6_ORYSJ3.789e-3556.96Putative U2-associated SR140 protein OS=Oryza sati... [more]
Q6ETK5_ORYSJ3.789e-3556.96RNA recognition motif (RRM)-containing protein-lik... [more]
Q0E3D7_ORYSJ3.789e-3556.96Os02g0179900 protein OS=Oryza sativa subsp. japoni... [more]
B8AIW7_ORYSI8.440e-3556.33Putative uncharacterized protein OS=Oryza sativa s... [more]
B9F3E1_ORYSJ1.440e-3457.42Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR407581 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G25060.15.560e-3247.44| Symbols: | RNA recognition motif (RRM)-containi... [more]
AT5G10800.12.418e-2748.43| Symbols: | RNA recognition motif (RRM)-containi... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013170mRNA splicing factor, Cwf21PFAMPF08312cwf21coord: 65..101
score: 1
NoneNo IPR availableSEGsegsegcoord: 44..61
score: NAcoord: 155..189
score: NAcoord: 195..219
score
NoneNo IPR availableSEGsegsegcoord: 105..116
score
NoneNo IPR availableSEGsegsegcoord: 1..21
score: NAcoord: 42..54
score
NoneNo IPR availableSEGsegsegcoord: 6..21
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407581 ID=GR407581; Name=GR407581; organism=Cicer arietinum; type=EST; length=689bp
TGTTTTGCCAGCCTCTAAATGGGCCCGAGAGGATGATGAGAGTGACGATG
AGCAAACGAAGGGTGGAAAAAATCTTGGGTTAAGCTACTCGTCTTCTGGT
AGTGAGAATGTGGGTGATGGCCTTATAAAAGCTGATGAGTCAGAGGCTGC
TGCTGATTCAAGTTTTTCAGCTCATGCTGACAGTGGGCTGAATGAAGAGC
AGAGGCAAAAGTTGAGACGCTTGGAGGTTGCTTTAATTGAATATCGTGAG
TCCCTAGAAGAAAGGGGTATTAAAAATTTGGAGGAAATTGAGAAGAAAGT
TTTGATGCATCGTAAACGGTTGCAAGTGGAGTACGGGTTATCAGAGTCTA
GTGAAGATGGTCAAGGCAGTAGGAGAACATCTTCAGAGAGGAGGGATAGG
CATGATGCCTCAAGGAAACGGCACCGTACCCATAGTCCAAGTGGTAGTCC
ACAACAGAAATTATCAAGCAAAGACAGAGATAGAGAACATGATTCAGAAA
GGGAACGAGACAGAAAAAGAGATAGAAGTTATGATATTGATGGCGACAGA
GGAAGAGACCGGCTCAGGGAGAAGAGTGGAAGCAGAGAGAGGGATGATCA
TGATAAGGATAGAGGCAGGGACAGAGACAGAGACAGAGACAGAGACAGGA
GAAGACGCGCCAAATAACATTTCTCATGCTTCAACACCA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR013170mRNA_splic_Cwf21_dom