GR407949

EST Overview
NameGR407949
Unique NameGR407949
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length522
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR407949 vs. SwissProt
Match: U139_ARATH (UPF0139 membrane protein At5g07960 OS=Arabidopsis thaliana GN=At5g07960 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.868e-39
Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = -2
Query:  192 SHGN-----DPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGKQ 488
            SHGN     DPRQPSA KPY+   +AP+DLP+DY+GFIAVI GV+GVMFRYK+ SWLA+IFCAQS+ANMRN+ENDLKQ+ MAMMF+IMGL+TNY GP RP  K+
Sbjct:    4 SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATKK 107          
BLAST of GR407949 vs. SwissProt
Match: U139_MANSE (UPF0139 membrane protein pMsmaA27 OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.676e-8
Identity = 32/95 (33.68%), Postives = 51/95 (53.68%), Query Frame = -2
Query:  204 NDPRQPSAGKPYVAP--VIAP-QDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRP 479
            +DPR+    + Y  P    AP +DL  DY   + ++F + G+M R K  +W A+   + S AN R V +D KQ++ + M SI  ++ +Y   P P
Sbjct:    5 SDPRRADRERRYKPPPSTTAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSR-VSDDTKQIVSSFMLSISAVVMSYLQNPSP 98          
BLAST of GR407949 vs. SwissProt
Match: U139_DICDI (UPF0139 membrane protein OS=Dictyostelium discoideum GN=DDB_G0275849 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.801e-8
Identity = 19/71 (26.76%), Postives = 45/71 (63.38%), Query Frame = -2
Query:  213 PQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGP 425
            P++  ++     ++IFG  G+M +YK+  W++ + C   ++N+++ ++ ++ ++  +  S+MGL+  YFGP
Sbjct:   22 PKEGELELYSLFSIIFGFLGIMLKYKICLWVSAVCCVAYLSNLKSKDSSVRTILSPVSLSLMGLVMAYFGP 92          
BLAST of GR407949 vs. SwissProt
Match: CS056_MOUSE (UPF0139 membrane protein C19orf56 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.932e-7
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = -2
Query:  204 NDPRQPSAGKPYVAPVI----APQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRP 479
            +DPR+P+    Y  P      A  D   DY   + +IF + G+M + K  +W+A+     S AN R+ E D KQ+M + M SI  ++ +Y   P+P
Sbjct:    7 SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 101          
BLAST of GR407949 vs. SwissProt
Match: CS056_HUMAN (UPF0139 membrane protein C19orf56 OS=Homo sapiens GN=C19orf56 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.932e-7
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = -2
Query:  204 NDPRQPSAGKPYVAPVI----APQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRP 479
            +DPR+P+    Y  P      A  D   DY   + +IF + G+M + K  +W+A+     S AN R+ E D KQ+M + M SI  ++ +Y   P+P
Sbjct:    7 SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 101          
BLAST of GR407949 vs. SwissProt
Match: CS056_BOVIN (UPF0139 membrane protein C19orf56 homolog OS=Bos taurus PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.932e-7
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = -2
Query:  204 NDPRQPSAGKPYVAPVI----APQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRP 479
            +DPR+P+    Y  P      A  D   DY   + +IF + G+M + K  +W+A+     S AN R+ E D KQ+M + M SI  ++ +Y   P+P
Sbjct:    7 SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 101          
BLAST of GR407949 vs. SwissProt
Match: CS056_PIG (UPF0139 membrane protein C19orf56 homolog OS=Sus scrofa PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 9.054e-7
Identity = 32/96 (33.33%), Postives = 49/96 (51.04%), Query Frame = -2
Query:  204 NDPRQPSAGKPYVAPVI----APQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRP 479
            +DPR P+    Y  P      A  D   DY   + +IF + G+M + K  +W+A+     S AN R+ E D KQ+M + M SI  ++ +Y   P+P
Sbjct:    7 SDPRSPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 101          
BLAST of GR407949 vs. TrEMBL
Match: C6T148_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.042e-46
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = -2
Query:  189 MSSHGNDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGKQS 494
            MSS+ NDPRQPSA +PYVAP I+PQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQS+ANMRNVENDLKQVMMAMMFS+MGLITNYFGPPRP GKQS
Sbjct:    1 MSSNPNDPRQPSAARPYVAPQISPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSVANMRNVENDLKQVMMAMMFSLMGLITNYFGPPRP-GKQS 101          
BLAST of GR407949 vs. TrEMBL
Match: B9N068_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827418 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.590e-39
Identity = 74/99 (74.75%), Postives = 88/99 (88.89%), Query Frame = -2
Query:  195 SSHGNDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGK 491
            S+  NDPRQP A KP+VAP+++PQDLP+DY+GFIAVI GVAGVMFRYKL SWLALIFCAQS++NMRN+ENDLKQ+ MA MF+IMGL+TNY GP RPG +
Sbjct:    8 SASANDPRQPLAAKPFVAPMVSPQDLPVDYSGFIAVILGVAGVMFRYKLCSWLALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPGSQ 106          
BLAST of GR407949 vs. TrEMBL
Match: C5X079_SORBI (Putative uncharacterized protein Sb01g007650 OS=Sorghum bicolor GN=Sb01g007650 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.771e-38
Identity = 69/94 (73.40%), Postives = 83/94 (88.30%), Query Frame = -2
Query:  201 GNDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPG 482
            G+DPRQPS  KPY  P ++PQDLPIDYAGF+AV+FGV GVM RYK+ SW+A+IFCAQS+ANM+N ENDLKQ+ MA MF++MGL+TNYFGPPRPG
Sbjct:   15 GSDPRQPSTAKPYAPPKLSPQDLPIDYAGFLAVVFGVVGVMLRYKVCSWIAIIFCAQSLANMKNFENDLKQLSMAFMFAVMGLVTNYFGPPRPG 108          
BLAST of GR407949 vs. TrEMBL
Match: Q0WU11_ARATH (Putative uncharacterized protein At5g07960 OS=Arabidopsis thaliana GN=At5g07960 PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.843e-38
Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = -2
Query:  192 SHGN-----DPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGKQ 488
            SHGN     DPRQPSA KPY+   +AP+DLP+DY+GFIAVI GV+GVMFRYK+ SWLA+IFCAQS+ANMRN+ENDLKQ+ MAMMF+IMGL+TNY GP RP  K+
Sbjct:    4 SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATKK 107          
BLAST of GR407949 vs. TrEMBL
Match: A9PD61_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.970e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = -2
Query:  195 MSSHG------NDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGK 494
            MSSH       NDPRQPSA K ++AP+++PQD+P+DY+GF+AVI GVAGVMFRYKL SWLALIFCAQS++NMRN+ENDLKQ+ MA MF+IMGL+TNY GP RP  +
Sbjct:    1 MSSHNYNPASANDPRQPSASKSFLAPMVSPQDVPVDYSGFVAVILGVAGVMFRYKLCSWLALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPASQ 106          
BLAST of GR407949 vs. TrEMBL
Match: A9PB71_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569929 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.970e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = -2
Query:  195 MSSHGN------DPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGK 494
            MSSH N      DPRQPSA K ++AP+++PQD+P+DY+GF+AVI GVAGVMFRYKL SWLALIFCAQS++NMRN+ENDLKQ+ MA MF+IMGL+TNY GP RP  +
Sbjct:    1 MSSHNNNPASANDPRQPSASKSFLAPMVSPQDVPVDYSGFVAVILGVAGVMFRYKLCSWLALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPASQ 106          
BLAST of GR407949 vs. TrEMBL
Match: D7M0P0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487629 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.486e-37
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = -2
Query:  192 SSHGNDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGKQ 491
            +S  NDPR PSA KPY    +AP+DLP+DY+GFIAVI GV+GVMFRYK+ SWLA+IFCAQS+ANMRN+ENDLKQ+ MAMMF+IMGL+TNY GP RP  K+
Sbjct:    8 ASSANDPRLPSAAKPYTPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATKK 107          
BLAST of GR407949 vs. TrEMBL
Match: B6SYH6_MAIZE (PTD008 protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.486e-37
Identity = 68/94 (72.34%), Postives = 82/94 (87.23%), Query Frame = -2
Query:  201 GNDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPG 482
            G+DPRQPS  KPY  P ++PQDLPIDYAGF+AV+FGV GVM RYK+ SW+A+IFCAQS+ANM+N ENDLKQ+ MA MF++MGL+TNYFGP RPG
Sbjct:   15 GSDPRQPSTAKPYAPPKLSPQDLPIDYAGFLAVVFGVLGVMLRYKVCSWIAIIFCAQSLANMKNFENDLKQLSMAFMFAVMGLVTNYFGPARPG 108          
BLAST of GR407949 vs. TrEMBL
Match: B6SJC6_MAIZE (PTD008 protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.178e-36
Identity = 68/94 (72.34%), Postives = 81/94 (86.17%), Query Frame = -2
Query:  201 GNDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPG 482
            G+DPRQPS  KPY  P ++PQDLPIDYAGF+AV FGV GVM RYK+ SW+A+IFCAQS+ANM+N ENDLKQ+ MA MF++MGL+TNYFGP RPG
Sbjct:   15 GSDPRQPSTAKPYAPPKLSPQDLPIDYAGFLAVAFGVLGVMLRYKVCSWIAIIFCAQSLANMKNFENDLKQLSMAFMFAVMGLVTNYFGPARPG 108          
BLAST of GR407949 vs. TrEMBL
Match: Q10CL8_ORYSJ (Os03g0756800 protein OS=Oryza sativa subsp. japonica GN=Os03g0756800 PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.081e-35
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = -2
Query:  192 NDPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGKQ 479
            NDPRQPS  + Y  P ++PQDLPIDYAGF+AV+FGV GVM RYK+ SW+A+IFCAQS+ NM+N ENDLKQ+ MA MF++MGL+TNY GPPRPG K+
Sbjct:   18 NDPRQPSTARQYTPPKLSPQDLPIDYAGFLAVVFGVLGVMLRYKVCSWIAIIFCAQSLVNMKNFENDLKQLSMAFMFAVMGLVTNYLGPPRPGTKR 113          
BLAST of GR407949 vs. TAIR peptide
Match: AT5G07960.1 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr5:2542350-2543253 FORWARD LENGTH=107)

HSP 1 Score: 159.844 bits (403), Expect = 7.586e-40
Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = -2
Query:  192 SHGN-----DPRQPSAGKPYVAPVIAPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSIMGLITNYFGPPRPGGKQ 488
            SHGN     DPRQPSA KPY+   +AP+DLP+DY+GFIAVI GV+GVMFRYK+ SWLA+IFCAQS+ANMRN+ENDLKQ+ MAMMF+IMGL+TNY GP RP  K+
Sbjct:    4 SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATKK 107          
The following BLAST results are available for this feature:
BLAST of GR407949 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
U139_ARATH6.868e-3971.15UPF0139 membrane protein At5g07960 OS=Arabidopsis ... [more]
U139_MANSE3.676e-833.68UPF0139 membrane protein pMsmaA27 OS=Manduca sexta... [more]
U139_DICDI4.801e-826.76UPF0139 membrane protein OS=Dictyostelium discoide... [more]
CS056_MOUSE6.932e-733.33UPF0139 membrane protein C19orf56 homolog OS=Mus m... [more]
CS056_HUMAN6.932e-733.33UPF0139 membrane protein C19orf56 OS=Homo sapiens ... [more]
CS056_BOVIN6.932e-733.33UPF0139 membrane protein C19orf56 homolog OS=Bos t... [more]
CS056_PIG9.054e-733.33UPF0139 membrane protein C19orf56 homolog OS=Sus s... [more]
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BLAST of GR407949 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T148_SOYBN1.042e-4691.18Putative uncharacterized protein OS=Glycine max PE... [more]
B9N068_POPTR3.590e-3974.75Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5X079_SORBI6.771e-3873.40Putative uncharacterized protein Sb01g007650 OS=So... [more]
Q0WU11_ARATH8.843e-3871.15Putative uncharacterized protein At5g07960 OS=Arab... [more]
A9PD61_POPTR1.970e-3768.87Putative uncharacterized protein OS=Populus tricho... [more]
A9PB71_POPTR1.970e-3768.87Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7M0P0_ARALY7.486e-3771.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
B6SYH6_MAIZE7.486e-3772.34PTD008 protein OS=Zea mays PE=4 SV=1[more]
B6SJC6_MAIZE2.178e-3672.34PTD008 protein OS=Zea mays PE=4 SV=1[more]
Q10CL8_ORYSJ1.081e-3568.75Os03g0756800 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of GR407949 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G07960.17.586e-4071.15| Symbols: | unknown protein; CONTAINS InterPro D... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..14
score
NoneNo IPR availableSEGsegsegcoord: 44..54
score
IPR005351Uncharacterised protein family UPF0139PANTHERPTHR13193CGI-140coord: 1..106
score: 5.4
IPR005351Uncharacterised protein family UPF0139PFAMPF03669UPF0139coord: 9..103
score: 2.7

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407949 ID=GR407949; Name=GR407949; organism=Cicer arietinum; type=EST; length=522bp
AAACATCCAATTGTCGAAATTGACAGATAATCCATTCTTCGTAAGCATAA
TCAATAAAGGGAACTAAAAAGCCACATAAAGAAAGAAAACAGAAACACTA
AATTACTCTAAATTTCTTTTTTGCTTGTTGGTCGATTCCTGAAAAGACTC
CACGTAAAGGTCATTTTCACCTCAAGAACTTGAGATCAGCTTTGCTTGCC
ACCGGGTCTAGGGGGTCCAAAGTAGTTTGTTATCAATCCCATTATAGAAA
ACATCATAGCCATCATAACTTGTTTGAGATCGTTTTCAACATTCCTCATG
TTAGCAATCGATTGCGCACAGAATATAAGAGCCAACCACGAACTCAGCTT
GTACCTAAACATGACGCCTGCGACGCCGAATATGACGGCGATGAAACCAG
CATAGTCGATCGGAAGGTCTTGTGGAGCAATCACCGGAGCCACGTATGGC
TTCCCCGCCGATGGCTGACGTGGGTCGTTCCCGTGCGATGACATCTCTGA
ATTCTCTCCCTACTTCCGTTTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR005351ASTER