GR408603
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR408603 vs. TrEMBL
Match: B9HQ13_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832937 PE=4 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.024e-25 Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R+TINKLK+ER ITPKLIFIRGGQDDAS FEN+LIEEQDVDGSG TSVMGFVSFLED+TQ V+E+MK Sbjct: 678 RSTINKLKQERSITPKLIFIRGGQDDASAFENYLIEEQDVDGSGFTSVMGFVSFLEDVTQSVMEYMK 744
BLAST of GR408603 vs. TrEMBL
Match: D7TCU0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_80.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036116001 PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.453e-25 Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 RTTINKLK+ER ITPKL+FIRGGQDDA+ FEN+LIEEQDV+GSGLTSVMGFVSFLEDIT+ VLE+MK Sbjct: 678 RTTINKLKQERSITPKLLFIRGGQDDATAFENYLIEEQDVEGSGLTSVMGFVSFLEDITRSVLEYMK 744
BLAST of GR408603 vs. TrEMBL
Match: A5C5V9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037581 PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.453e-25 Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 RTTINKLK+ER ITPKL+FIRGGQDDA+ FEN+LIEEQDV+GSGLTSVMGFVSFLEDIT+ VLE+MK Sbjct: 680 RTTINKLKQERSITPKLLFIRGGQDDATAFENYLIEEQDVEGSGLTSVMGFVSFLEDITRSVLEYMK 746
BLAST of GR408603 vs. TrEMBL
Match: B9SCU8_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_1281710 PE=4 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.691e-25 Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R+TINKLK++R ITPKLIFIRGGQDDAS FEN+LIEEQDVDG+G TSVMGFVSFLEDITQ V+E+MK Sbjct: 674 RSTINKLKQDRSITPKLIFIRGGQDDASAFENYLIEEQDVDGNGFTSVMGFVSFLEDITQSVMEYMK 740
BLAST of GR408603 vs. TrEMBL
Match: B9MYW1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827234 PE=4 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.985e-24 Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R+TINKLK+ER ITPKLIFIRGGQDDAS+FEN+LIEEQ VDGSG SVMGFVSFLED+ Q VLE+MK Sbjct: 678 RSTINKLKQERSITPKLIFIRGGQDDASVFENYLIEEQHVDGSGFASVMGFVSFLEDVIQSVLEYMK 744
BLAST of GR408603 vs. TrEMBL
Match: Q9ZQH3_ARATH (At2g27460 OS=Arabidopsis thaliana GN=At2g27460/F10A12.14 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.573e-22 Identity = 49/67 (73.13%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R TINK+K+ER ITPKL+FIRGG+DDA++FEN+LIEEQDVDG+G S MGFVSFL+DI+Q+V E+MK Sbjct: 679 RQTINKVKQERSITPKLVFIRGGRDDATVFENYLIEEQDVDGNGFASAMGFVSFLDDISQRVTEYMK 745
BLAST of GR408603 vs. TrEMBL
Match: D7LHL0_ARALY (Sec23/sec24 transport family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481646 PE=4 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.358e-21 Identity = 49/67 (73.13%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R TINK+K+ER ITPKL+FIRGG+DDA++FEN+LIEEQDVDG G S MGFVSFL+DI+Q+V E+MK Sbjct: 679 RQTINKVKQERSITPKLMFIRGGRDDATVFENYLIEEQDVDGIGFASAMGFVSFLDDISQRVTEYMK 745
BLAST of GR408603 vs. TrEMBL
Match: C0P6N8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.461e-17 Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDI 174 RTTINKLK++RCITPKL FI GG+DD+++FE++LIEEQDVDGSGLT+ GFV+F E + Sbjct: 676 RTTINKLKQDRCITPKLTFIHGGEDDSTLFESYLIEEQDVDGSGLTTGSGFVAFRESV 733
BLAST of GR408603 vs. TrEMBL
Match: B4FCA2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.461e-17 Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDI 174 RTTINKLK++RCITPKL FI GG+DD+++FE++LIEEQDVDGSGLT+ GFV+F E + Sbjct: 38 RTTINKLKQDRCITPKLTFIHGGEDDSTLFESYLIEEQDVDGSGLTTGSGFVAFRESV 95
BLAST of GR408603 vs. TrEMBL
Match: D5AD51_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.520e-17 Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R INKLK+ER ITPKL+ IR G D+A FE +LIEEQDVDG GL++ MGFVSFLE I++ +LE+MK Sbjct: 303 RAIINKLKQERSITPKLLLIRSGHDNAEPFEQYLIEEQDVDGVGLSNGMGFVSFLEQISRDILEYMK 369
BLAST of GR408603 vs. TAIR peptide
Match: AT2G27460.1 (| Symbols: | sec23/sec24 transport family protein | chr2:11740670-11744867 FORWARD LENGTH=745) HSP 1 Score: 107.842 bits (268), Expect = 3.164e-24 Identity = 49/67 (73.13%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 1 RTTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 201 R TINK+K+ER ITPKL+FIRGG+DDA++FEN+LIEEQDVDG+G S MGFVSFL+DI+Q+V E+MK Sbjct: 679 RQTINKVKQERSITPKLVFIRGGRDDATVFENYLIEEQDVDGNGFASAMGFVSFLDDISQRVTEYMK 745 The following BLAST results are available for this feature:
BLAST of GR408603 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR408603 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR408603 ID=GR408603; Name=GR408603; organism=Cicer arietinum; type=EST; length=502bpback to top |