GR408719

EST Overview
NameGR408719
Unique NameGR408719
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length710
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR408719 vs. TrEMBL
Match: A9YWQ9_MEDTR (Zinc finger protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.062e-30
Identity = 79/140 (56.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKK--QHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTTHSVPNSPKLQCSSN----XXXXXXXXXXXXXXXXXXXXXXLRLSKSRCG 690
            MV  WRKAFCTSI RDK  +   + TEKK  QHC+NSSTNQSPRI+SKFGFFSNPSTPR QSQ        PSSTGS+TLRC+TS+++TT  SVPNSPKLQC+++                          LRLSK+RCG
Sbjct:    1 MVTGWRKAFCTSIPRDKEPK---ITTEKKHHQHCENSSTNQSPRITSKFGFFSNPSTPRTQSQ--------PSSTGSSTLRCKTSISSTTC-SVPNSPKLQCNNHNPKTPKSFTNPNSPKSPSSFSFLKNTLRLSKNRCG 128          
BLAST of GR408719 vs. TrEMBL
Match: B9SSC8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0187750 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.885e-22
Identity = 69/138 (50.00%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTTHSVPNSPKLQC----SSNXXXXXXXXXXXXXXXXXXXXXXLRLSKSRCG 690
            MV  WR+AFCTSI +++      + T+KKQ    SS++ SPRISSKFGFFSNPSTPR QSQP        SST S  LRCRT+ ATT T SVPNSPKLQ     S                        LRLSK+RCG
Sbjct:    1 MVTGWRRAFCTSIPKERETP---IFTDKKQQQQCSSSSHSPRISSKFGFFSNPSTPRLQSQP-------VSSTPS--LRCRTTTATTPTSSVPNSPKLQSKKSKSPRLFHFSNPSSPKSPSSFSLLKATLRLSKNRCG 126          
BLAST of GR408719 vs. TrEMBL
Match: D7SSI6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_205.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003713001 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.137e-12
Identity = 54/142 (38.03%), Postives = 70/142 (49.30%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKN-RESKVVITEKKQHCDNSSTNQSPRISSKFGFF---SNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTTHSVPNSPKLQC----SSNXXXXXXXXXXXXXXXXXXXXXXLRLSKSRCG 690
            MV  WRKAFCT++ +D   RE++    EK++H ++ + N SPR  +KF FF   SNPSTPR QS               + LRCRT+  TT   S  NSP++QC    S                        L+LSKSRCG
Sbjct:    1 MVTGWRKAFCTTVPKDGEIREAR----EKQKHSNDPNPNPSPRFGAKFSFFSTGSNPSTPRLQSH--------------SGLRCRTT--TTPATSAQNSPRIQCKTAKSPGLFQCSNPSSPKSPSSFSLLKASLKLSKSRCG 122          
BLAST of GR408719 vs. TrEMBL
Match: Q9ZQ46_ARATH (At2g22680 OS=Arabidopsis thaliana GN=At2g22680 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.030e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVAT--TTTHSVPNSPKLQCSS 594
            M+N WR+AFCTSI ++ N+             D+       + +S+FGFFS PSTPR  S            TG+ +LRCRTS AT  +TT S+P +PKL+C +
Sbjct:    1 MLNGWRRAFCTSIPKETNQNDVD---------DDGLVGLRHKSTSRFGFFSTPSTPRSDS-----------GTGTYSLRCRTSTATAVSTTSSLPGTPKLKCKT 84          
BLAST of GR408719 vs. TrEMBL
Match: A5BZY2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007401 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.000e-10
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
Query:  301 WRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFS---NPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTTHSVPNSPKLQCSS 594
            WR+AFCT+I RD    S+    +K++H    S + SPR  +K G FS   N STPR QSQP            S +LRCRT+VA   T S+  SPKLQ  +
Sbjct:    5 WRRAFCTTIHRD----SQATHGDKQRHT-TPSPSPSPRSGTKLGLFSSGSNTSTPRLQSQP----------VSSPSLRCRTTVAAAQTPSIDESPKLQAKT 90          
BLAST of GR408719 vs. TrEMBL
Match: O49548_ARATH (Copia-like retroelement pol polyprotein-like OS=Arabidopsis thaliana GN=F6H11.200 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.926e-10
Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  286 KMVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQ---SPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTT-HSVPNSPKLQC 588
            +MV  WRKAFCTS+S ++++         +QH    +T+    +PR  SKFGF SNPSTPR +S+            G +   CR+S +T+ T  S+P SPKL C
Sbjct:  304 EMVFGWRKAFCTSVSSNQDKP--------QQHSSLHTTDPPIPTPRFRSKFGFLSNPSTPRLRSR------------GGSGTGCRSSASTSVTIPSLPTSPKLHC 388          
BLAST of GR408719 vs. TrEMBL
Match: Q0WQX9_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g65683 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.296e-9
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQ---SPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTT-HSVPNSPKLQC 588
            MV  WRKAFCTS+S ++++         +QH    +T+    +PR  SKFGF SNPSTPR +S+            G +   CR+S +T+ T  S+P SPKL C
Sbjct:    1 MVFGWRKAFCTSVSSNQDKP--------QQHSSLHTTDPPIPTPRFRSKFGFLSNPSTPRLRSR------------GGSGTGCRSSASTSVTIPSLPTSPKLHC 84          
BLAST of GR408719 vs. TrEMBL
Match: Q8GY95_ARATH (At5g65683 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 6.434e-9
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQ---SPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTT-HSVPNSPKLQC 588
            MV  WRKAFCTS+S ++++         +QH    +T+    +PR  SK GF SNPSTPR +S+            G +   CR+S +T+ T  S+P SPKL C
Sbjct:    1 MVFGWRKAFCTSVSSNQDKP--------QQHSSLHTTDPPIPTPRFRSKLGFLSNPSTPRLRSR------------GGSGTGCRSSASTSVTIPSLPTSPKLHC 84          
BLAST of GR408719 vs. TrEMBL
Match: Q9SZJ1_ARATH (Putative uncharacterized protein AT4g37890 OS=Arabidopsis thaliana GN=AT4g37890 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.445e-8
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVAT---TTTHSVPNSPKLQCSSN 597
            M+N  R+ F +SI + K+              D+S   Q P  +S+FGFFSNPSTPR +++P        S T S T+ C++  AT   T + S+P SPKLQC ++
Sbjct:    1 MMNGLRRTFWSSIHKKKDNN----------RVDDSLDRQKPTTTSRFGFFSNPSTPRSETRPD-------SVTCSPTIPCQSWSATAISTPSPSLPASPKLQCDTS 89          
BLAST of GR408719 vs. TrEMBL
Match: Q8GYZ4_ARATH (At4g37890 OS=Arabidopsis thaliana GN=At4g37890/F20D10_10 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.445e-8
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVAT---TTTHSVPNSPKLQCSSN 597
            M+N  R+ F +SI + K+              D+S   Q P  +S+FGFFSNPSTPR +++P        S T S T+ C++  AT   T + S+P SPKLQC ++
Sbjct:    1 MMNGLRRTFWSSIHKKKDNN----------RVDDSLDRQKPTTTSRFGFFSNPSTPRSETRPD-------SVTCSPTIPCQSWSATAISTPSPSLPASPKLQCDTS 89          
BLAST of GR408719 vs. TAIR peptide
Match: AT2G22680.1 (| Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr2:9645433-9647484 FORWARD LENGTH=683)

HSP 1 Score: 72.4034 bits (176), Expect = 2.733e-13
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVAT--TTTHSVPNSPKLQCSS 594
            M+N WR+AFCTSI ++ N+             D+       + +S+FGFFS PSTPR  S            TG+ +LRCRTS AT  +TT S+P +PKL+C +
Sbjct:    1 MLNGWRRAFCTSIPKETNQNDVD---------DDGLVGLRHKSTSRFGFFSTPSTPRSDS-----------GTGTYSLRCRTSTATAVSTTSSLPGTPKLKCKT 84          
BLAST of GR408719 vs. TAIR peptide
Match: AT5G65683.1 (| Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr5:26261472-26263704 FORWARD LENGTH=717)

HSP 1 Score: 67.3958 bits (163), Expect = 8.790e-12
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQ---SPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVATTTT-HSVPNSPKLQC 588
            MV  WRKAFCTS+S ++++         +QH    +T+    +PR  SKFGF SNPSTPR +S+            G +   CR+S +T+ T  S+P SPKL C
Sbjct:    1 MVFGWRKAFCTSVSSNQDKP--------QQHSSLHTTDPPIPTPRFRSKFGFLSNPSTPRLRSR------------GGSGTGCRSSASTSVTIPSLPTSPKLHC 84          
BLAST of GR408719 vs. TAIR peptide
Match: AT4G37890.2 (| Symbols: EDA40 | Zinc finger (C3HC4-type RING finger) family protein | chr4:17812812-17815031 REVERSE LENGTH=711)

HSP 1 Score: 63.1586 bits (152), Expect = 1.658e-10
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVAT---TTTHSVPNSPKLQCSSN 597
            M+N  R+ F +SI + K+              D+S   Q P  +S+FGFFSNPSTPR +++P        S T S T+ C++  AT   T + S+P SPKLQC ++
Sbjct:    1 MMNGLRRTFWSSIHKKKDNN----------RVDDSLDRQKPTTTSRFGFFSNPSTPRSETRPD-------SVTCSPTIPCQSWSATAISTPSPSLPASPKLQCDTS 89          
BLAST of GR408719 vs. TAIR peptide
Match: AT4G37890.1 (| Symbols: EDA40 | Zinc finger (C3HC4-type RING finger) family protein | chr4:17812812-17815031 REVERSE LENGTH=739)

HSP 1 Score: 63.1586 bits (152), Expect = 1.658e-10
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query:  289 MVNMWRKAFCTSISRDKNRESKVVITEKKQHCDNSSTNQSPRISSKFGFFSNPSTPRCQSQPQPQLEPKPSSTGSTTLRCRTSVAT---TTTHSVPNSPKLQCSSN 597
            M+N  R+ F +SI + K+              D+S   Q P  +S+FGFFSNPSTPR +++P        S T S T+ C++  AT   T + S+P SPKLQC ++
Sbjct:    1 MMNGLRRTFWSSIHKKKDNN----------RVDDSLDRQKPTTTSRFGFFSNPSTPRSETRPD-------SVTCSPTIPCQSWSATAISTPSPSLPASPKLQCDTS 89          
The following BLAST results are available for this feature:
BLAST of GR408719 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A9YWQ9_MEDTR5.062e-3056.43Zinc finger protein OS=Medicago truncatula PE=4 SV... [more]
B9SSC8_RICCO3.885e-2250.00Protein binding protein, putative OS=Ricinus commu... [more]
D7SSI6_VITVI2.137e-1238.03Whole genome shotgun sequence of line PN40024, sca... [more]
Q9ZQ46_ARATH4.030e-1140.38At2g22680 OS=Arabidopsis thaliana GN=At2g22680 PE=... [more]
A5BZY2_VITVI2.000e-1043.56Putative uncharacterized protein OS=Vitis vinifera... [more]
O49548_ARATH9.926e-1040.00Copia-like retroelement pol polyprotein-like OS=Ar... [more]
Q0WQX9_ARATH1.296e-940.38Putative uncharacterized protein OS=Arabidopsis th... [more]
Q8GY95_ARATH6.434e-939.42At5g65683 OS=Arabidopsis thaliana PE=2 SV=1[more]
Q9SZJ1_ARATH2.445e-837.74Putative uncharacterized protein AT4g37890 OS=Arab... [more]
Q8GYZ4_ARATH2.445e-837.74At4g37890 OS=Arabidopsis thaliana GN=At4g37890/F20... [more]
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BLAST of GR408719 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G22680.12.733e-1340.38| Symbols: | Zinc finger (C3HC4-type RING finger)... [more]
AT5G65683.18.790e-1240.38| Symbols: | Zinc finger (C3HC4-type RING finger)... [more]
AT4G37890.21.658e-1037.74| Symbols: EDA40 | Zinc finger (C3HC4-type RING fi... [more]
AT4G37890.11.658e-1037.74| Symbols: EDA40 | Zinc finger (C3HC4-type RING fi... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 115..136
score
NoneNo IPR availableSEGsegsegcoord: 10..34
score: NAcoord: 39..48
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR408719 ID=GR408719; Name=GR408719; organism=Cicer arietinum; type=EST; length=710bp
TTTTTTCGTTGGGGTGGTCTTTTTGGGGGTCTCAAAACGGAAATATAGAA
AAAATAGACCTAGGTCAAGACAAAGATAAATAGATGGTAGGGAACTGAAA
TAGAAAAAAGGAAAAGAGAAACATGAAAAGGATCTCTGAATCTAATCCAT
TTCTCCTCACCCTCCCTCTCTAACCAACTTCCATGCCCATAAACCATTAT
ATCATCCACCCTTCAAACACAAATTTCTCAACAAATTCAAAATCAGAAAA
ACTAAACCCCTTTCAAGTCACCCAAGAGTACAGTGAAAATGGTTAATATG
TGGAGAAAAGCATTCTGTACATCCATTTCCAGAGACAAAAACAGGGAATC
AAAAGTAGTAATAACCGAGAAAAAACAACATTGCGATAACTCCTCAACCA
ATCAAAGTCCTAGAATAAGTTCCAAGTTTGGTTTTTTTTCCAATCCATCA
ACACCACGTTGTCAATCTCAACCTCAACCTCAACTTGAACCTAAACCTTC
ATCAACCGGTTCCACTACTCTTCGTTGCAGAACCTCCGTTGCAACAACAA
CCACTCATTCTGTTCCCAATAGTCCAAAACTCCAATGCAGTAGTAACACC
AAAACTCCTAAATCATTCTCTTCACCTAACTCACCATCAAGTTTCTCATT
TCTCAAATCCACTTTACGCTTATCCAAAAGTCGATGTGGATATGTATGCA
GAGTGTGAGA
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