GR408904

EST Overview
NameGR408904
Unique NameGR408904
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length706
Libraries
Library NameType
LIBEST_024777 ICC1882 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR408904 vs. TrEMBL
Match: C6T0Z4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.512e-46
Identity = 94/123 (76.42%), Postives = 104/123 (84.55%), Query Frame = 2
Query:   47 MVMDFKI-KTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            MV D K  +  +   L+FLLAS V+ILEA+GAGECGKTPIGSAAASLSPCL A  NVRAKV  A C RVGALL T+P+CLCAVLLSPLAKQAKINPA AIT+PKRCNIRNRPAGKKCG+YT+P
Sbjct:    1 MVRDVKNGRALLVAFLMFLLASEVLILEAEGAGECGKTPIGSAAASLSPCLGAVSNVRAKVPLACCARVGALLKTAPRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTVP 123          
BLAST of GR408904 vs. TrEMBL
Match: B9S7C4_RICCO (Lipid binding protein, putative OS=Ricinus communis GN=RCOM_0776490 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.008e-38
Identity = 79/116 (68.10%), Postives = 91/116 (78.45%), Query Frame = 2
Query:   65 IKTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            ++   A VL+FLLAS   + + D AGECGKTPI SAAASLSPCL A  NVRA V  A C +VGAL+ T+PKCLCAVLLSPLA QA I P IAIT+PKRCNI+NRP GKKCG+YT+P
Sbjct:    5 MRACFAAVLVFLLASNGFLSDVDAAGECGKTPIRSAAASLSPCLTAVGNVRASVPPACCSKVGALIKTAPKCLCAVLLSPLAMQAGIKPGIAITIPKRCNIKNRPVGKKCGRYTVP 120          
BLAST of GR408904 vs. TrEMBL
Match: B9HVQ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_566380 PE=4 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.830e-38
Identity = 78/120 (65.00%), Postives = 93/120 (77.50%), Query Frame = 2
Query:   53 MDFKIKTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            M + ++ ++ TVL+ L+AS   I + + AGECGKTPI SAAASLSPCL A  N RA V  A C +V AL+ T+PKCLCAVLLSPLAKQA I P IAIT+PKRC+I+NR AGKKCGKYTLP
Sbjct:    1 MSYNMRAWVVTVLVVLVASNAFISDVNAAGECGKTPIRSAAASLSPCLGAAGNARAAVPPACCSKVTALIKTAPKCLCAVLLSPLAKQAGIKPGIAITIPKRCSIKNRQAGKKCGKYTLP 120          
BLAST of GR408904 vs. TrEMBL
Match: D7T8D6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011567001 PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.779e-35
Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 2
Query:   53 MDFKIKTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            M   + T  A V+  +L S+  + EA+GAGECGKTPI SAAASLS CL A  N +AKV    C +V AL+ T+PKCLCAV+LSPLAK+A I PAIAIT+PKRCNI+NRP GKKCG Y +P
Sbjct:    1 MASNMPTCFAAVMALMLVSQAFVQEANGAGECGKTPIQSAAASLSSCLSAAGNAKAKVPPTCCTKVTALINTAPKCLCAVVLSPLAKKAGIKPAIAITIPKRCNIKNRPVGKKCGSYIIP 120          
BLAST of GR408904 vs. TrEMBL
Match: B9HJL8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_657041 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.963e-35
Identity = 74/115 (64.35%), Postives = 87/115 (75.65%), Query Frame = 2
Query:   53 MDFKIKTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCG 397
            M   ++ ++  +L  L+AS V I + + AGECGKTPI SAAASLSPCL A  NVRA V    C +VG+L+ T+PKCLCAVLLSPLAKQA I P IAIT+PKRCNI NRPAGKKCG
Sbjct:   17 MSSNMRAWVVVMLACLVASNVFICDVNAAGECGKTPIRSAAASLSPCLSAAGNVRAAVPPTCCSKVGSLIKTAPKCLCAVLLSPLAKQAGIKPGIAITIPKRCNIGNRPAGKKCG 131          
BLAST of GR408904 vs. TrEMBL
Match: Q9SHA0_ARATH (Putative uncharacterized protein At2g37870; T8P21.22 OS=Arabidopsis thaliana GN=At2g37870/ T8P21.22 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.761e-34
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   74 FIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            F+A  L+ LL S   +   + AGECG+ PI  AAASLSPCL AT+N R KV    C +VGAL+ T+P+CLCAV+LSPLAK+A INP IAI VPKRCNIRNRPAGK+CG+Y +P
Sbjct:    6 FVAVALMSLLIS---LASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115          
BLAST of GR408904 vs. TrEMBL
Match: A5B1E5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004738 PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.761e-34
Identity = 72/115 (62.61%), Postives = 86/115 (74.78%), Query Frame = 2
Query:   53 MDFKIKTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCG 397
            M   + T  A V+  +L S+  + EA+GAGECGKTPI SAAASLS CL A  N +AKV    C +V AL+ T+PKCLCAV+LSPLAK+A I PAIAIT+PKRCNI+NRP GKKCG
Sbjct:    1 MASNMPTCFAAVMALMLVSQAFVQEANGAGECGKTPIQSAAASLSSCLSAAGNAKAKVPPTCCTKVTALINTAPKCLCAVVLSPLAKKAGIKPAIAITIPKRCNIKNRPVGKKCG 115          
BLAST of GR408904 vs. TrEMBL
Match: D7LKQ2_ARALY (Protease inhibitor/seed storage/lipid transfer protein family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_321490 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.665e-33
Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 2
Query:   86 VLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            V++ L++  + +   + AGECG+ PI  AAASLSPCL AT+N R KV    C +VGAL+ T+P+CLCAV+LSPLAK+A INP IAI VPKRCNIRNRPAGK+CG+Y +P
Sbjct:    7 VVVALMSLLITLASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115          
BLAST of GR408904 vs. TrEMBL
Match: B8LLD1_PICSI (Non-specific lipid-transfer protein OS=Picea sitchensis PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.972e-27
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   86 VLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            V++  L S  ++  A GAGECGKTPI + A S+SPC+ A  N +  V  A C +V  +L   PKC+CAV LSP+AKQA INPA+AIT+PKRC I NR AGKKCG Y +P
Sbjct:    9 VILMALWSSFILQIAYGAGECGKTPINTVALSMSPCIGAANNAKVSVPPACCTQVKKVLAM-PKCMCAVFLSPIAKQAGINPAVAITIPKRCKIANRSAGKKCGSYIVP 116          
BLAST of GR408904 vs. TrEMBL
Match: A9NWE3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.972e-27
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   86 VLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            V++  L S  ++  A GAGECGKTPI + A S+SPC+ A  N +  V  A C +V  +L   PKC+CAV LSP+AKQA INPA+AIT+PKRC I NR AGKKCG Y +P
Sbjct:    9 VILMALWSSFILQIAYGAGECGKTPINTVALSMSPCIGAANNAKVSVPPACCTQVRKVLAM-PKCMCAVFLSPIAKQAGINPAVAITIPKRCKIANRSAGKKCGSYIVP 116          
BLAST of GR408904 vs. TAIR peptide
Match: AT2G37870.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:15859280-15859723 FORWARD LENGTH=115)

HSP 1 Score: 147.517 bits (371), Expect = 6.636e-36
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   74 FIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            F+A  L+ LL S   +   + AGECG+ PI  AAASLSPCL AT+N R KV    C +VGAL+ T+P+CLCAV+LSPLAK+A INP IAI VPKRCNIRNRPAGK+CG+Y +P
Sbjct:    6 FVAVALMSLLIS---LASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115          
BLAST of GR408904 vs. TAIR peptide
Match: AT5G05960.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:1790256-1790694 FORWARD LENGTH=116)

HSP 1 Score: 103.605 bits (257), Expect = 1.099e-22
Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 2
Query:   68 KTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            + F+  + I+ L + V      GAGECG+ P    A  L+PC  A ++  AKVS+  C RV  +   +PKCLCAV+LS  A+ +   P I++T+PKRCNI NRP G KCG YTLP
Sbjct:    8 RIFLLVLCIYSLKTMVY-----GAGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQM-GQNPKCLCAVMLSSTARSSGAKPEISMTIPKRCNIANRPVGYKCGAYTLP 116          
BLAST of GR408904 vs. TAIR peptide
Match: AT3G53980.2 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:19987760-19988203 REVERSE LENGTH=114)

HSP 1 Score: 99.7525 bits (247), Expect = 1.587e-21
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 2
Query:   74 FIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            F+  + + LL   V+    DGAGECG++   + A  L+PC  A ++  + V    C ++    + +PKCLCA+LLS  AK + ++P +A+T+PKRCN  NRP G KCG YTLP
Sbjct:    7 FLCILGLILLIGTVV----DGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRF-SQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114          
BLAST of GR408904 vs. TAIR peptide
Match: AT3G53980.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:19987760-19988203 REVERSE LENGTH=114)

HSP 1 Score: 99.7525 bits (247), Expect = 1.587e-21
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 2
Query:   74 FIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKVSSARCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 412
            F+  + + LL   V+    DGAGECG++   + A  L+PC  A ++  + V    C ++    + +PKCLCA+LLS  AK + ++P +A+T+PKRCN  NRP G KCG YTLP
Sbjct:    7 FLCILGLILLIGTVV----DGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRF-SQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114          
The following BLAST results are available for this feature:
BLAST of GR408904 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T0Z4_SOYBN8.512e-4676.42Putative uncharacterized protein OS=Glycine max PE... [more]
B9S7C4_RICCO1.008e-3868.10Lipid binding protein, putative OS=Ricinus communi... [more]
B9HVQ0_POPTR3.830e-3865.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T8D6_VITVI1.779e-3561.67Whole genome shotgun sequence of line PN40024, sca... [more]
B9HJL8_POPTR3.963e-3564.35Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9SHA0_ARATH9.761e-3462.83Putative uncharacterized protein At2g37870; T8P21.... [more]
A5B1E5_VITVI9.761e-3462.61Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LKQ2_ARALY1.665e-3361.47Protease inhibitor/seed storage/lipid transfer pro... [more]
B8LLD1_PICSI3.972e-2755.96Non-specific lipid-transfer protein OS=Picea sitch... [more]
A9NWE3_PICSI3.972e-2755.96Putative uncharacterized protein OS=Picea sitchens... [more]
back to top
BLAST of GR408904 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G37870.16.636e-3662.83| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
AT5G05960.11.099e-2246.09| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
AT3G53980.21.587e-2142.48| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
AT3G53980.11.587e-2142.48| Symbols: | Bifunctional inhibitor/lipid-transfe... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013770Plant lipid transfer protein/hydrophobic protein, helical domainGENE3D1.10.110.10no descriptioncoord: 56..126
score: 1.6
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storageSUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 51..127
score: 1.7
NoneNo IPR availableSEGsegsegcoord: 6..20
score: NAcoord: 30..46
score
NoneNo IPR availableSEGsegsegcoord: 36..51
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR408904 ID=GR408904; Name=GR408904; organism=Cicer arietinum; type=EST; length=706bp
GAATGTGCCAGTGCCATATATACAAAAAAAACAAGATTTAAAAAAAATGG
TGATGGACTTCAAGATTAAAACTTTCATTGCCACAGTGTTGATCTTTCTG
TTGGCATCAAGGGTCATGATTTTGGAAGCTGATGGTGCTGGAGAATGTGG
AAAGACTCCAATTGGGTCAGCAGCTGCTAGTTTAAGTCCTTGTTTGGATG
CCACACGTAATGTGAGGGCAAAAGTTTCATCAGCTCGTTGTGGTAGAGTT
GGTGCTTTGCTTACAACTTCACCAAAATGTCTTTGTGCTGTTCTTTTGTC
ACCTCTTGCAAAACAAGCCAAGATTAATCCTGCTATTGCTATTACTGTTC
CTAAGAGATGCAATATTAGGAACAGACCAGCTGGAAAGAAATGTGGAAAG
TACACACTTCCTTGAAACCAAAACAGGGGAATAATATATGACATATGAAG
CAGTATTTAACACATTAGAAAGCTAAATAAATTCTGTAATATGGCATTTT
CTACTGGGAGAGTGACATGTGTCAGGCTGTACTATTTTGTATTCCTCAGT
ATTTTTTTTAACTCAATGTATTTCTCATATATTGTTGCATGGTTTGGTGT
ATTGCATGATATTAATATTTTATAAAATAACAGTTACTATTGGTTTGTCC
CAATACAAACAAAATAAACTAATAAAACCAGGATTTTTCGTTTGATCCCC
CTGCTT
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: INTERPRO
TermDefinition
IPR013770Plant lipid transfer protein/hydrophobic protein helical domain
IPR016140Bifunc_inhib/LTP/seed_store