GR408940

EST Overview


Name	GR408940
Unique Name	GR408940
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	834

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR408940 vs. TrEMBL
Match: B7FMV5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 7.378e-32
Identity = 100/220 (45.45%), Postives = 115/220 (52.27%), Query Frame = 2

Query:   41 MQRKMQGYPQQQQCYGSDDGMWMESKGQMQPQVH--HYQXXXXXXXXXXQKQLFPA-AMHMKPA-----------------ANFGGNNHHMYPHQETMPAAAVGYGNQMHGNG-GKQFPYGGTHNHSPN---GVRPFNLXXXXXXXXXXXHV--------------GGSKKDEMRYERHGYGNGGDVRYVNSYEYNNNFNARIKP----HAHGPHKVNWT 574
            MQ K  GYPQQQ CYG +DGMWME+K Q Q Q H  H             KQ FP  AMHMKP                  +N GGN H+M+ HQ++M +   G+GN  HG+G G++FP+G T+ HSP+   GVRPFN            H               G SK DEMRYERHG   GGDV Y N Y YNN  N RIKP    H HG HKVNWT
Sbjct:    1 MQGKFLGYPQQQ-CYG-EDGMWMEAKAQQQ-QSHGFHQDSYTTDHSNYYDKQQFPLPAMHMKPGGFGKESDHSFSKHHGHGSNIGGN-HNMF-HQDSM-SNGHGFGNNNHGHGNGQKFPFGATNKHSPHHGGGVRPFNHHGGGHNDYVSEHEEYEFEAYKEECVGSGASKMDEMRYERHGT-YGGDVHYANPYGYNN--NNRIKPHGHGHGHGSHKVNWT 211

The following BLAST results are available for this feature:

BLAST of GR408940 vs. TrEMBL

BLAST of GR408940 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B7FMV5_MEDTR	7.378e-32	45.45	Putative uncharacterized protein OS=Medicago trunc...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 51..60 score: NAcoord: 129..139 score
None	No IPR available	SEG	seg	seg	coord: 4..16 score
None	No IPR available	SEG	seg	seg	coord: 1..16 score: NAcoord: 31..52 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408940 ID=GR408940; Name=GR408940; organism=Cicer arietinum; type=EST; length=834bp
GAACATTCAAGGTATAATAATCTATAATTCCAAAAACAAGATGCAAAGAA
AGATGCAAGGATACCCACAGCAACAGCAATGCTATGGTAGTGATGATGGC
ATGTGGATGGAAAGTAAGGGACAAATGCAGCCACAGGTCCATCACTACCA
GGACGATTCTTGGTCTAATGATAACAACAACCAGAAGCAACTATTTCCTG
CAGCTATGCACATGAAACCGGCCGCTAATTTTGGAGGAAACAACCACCAT
ATGTATCCTCATCAGGAAACCATGCCTGCTGCTGCAGTTGGTTATGGTAA
TCAAATGCATGGAAATGGTGGCAAACAATTCCCTTATGGTGGTACTCATA
ATCATTCTCCAAATGGTGTGAGGCCATTCAATCTTGAAGAGTATGAGTAT
GAAGCATACAAGGAGGAGCATGTTGGTGGTTCAAAGAAAGATGAAATGAG
ATATGAGCGACATGGATATGGAAATGGAGGTGATGTTCGCTATGTCAATT
CATATGAATATAATAACAACTTCAACGCCCGTATTAAGCCTCATGCTCAT
GGACCCCACAAAGTCAACTGGACACTACAGGGTGTCTAACTAATTAAATT
ACTGCTACTGGTACTTCCTCTGGATCCATCCAGCCTCCAGTATTAATAAC
ATGTGGGTGCAATAATTCCTGTTTTCTTATTCGAATAAGATCTCACCCTC
GATTATAAGGGAGGCTTGATTGTACCACCATTTATCCTAAATAAAATAAA
AAAACTATCCCCATCAATAAAACACATTACTTTATTATTTTCTTGGTAAA
TACACTTTTAANNAACTCGCATCCCTGAATCCTC

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