GR420872

EST Overview
NameGR420872
Unique NameGR420872
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length452
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR420872 vs. SwissProt
Match: ALG14_RAT (UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Rattus norvegicus GN=Alg14 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 8.230e-7
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = -3
Query:  232 VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 405
            + GI+   I YVESI RV   +L G +L+ L  +D   VQWP L+++YP++ Y+GR++
Sbjct:  161 ILGIKKVIIVYVESICRVETLSLSGKILWHL--SDYFIVQWPTLKEKYPKSVYLGRIV 216          
BLAST of GR420872 vs. TrEMBL
Match: Q2HUA0_MEDTR (UDP-N-acetylglucosamine transferase subunit ALG14, related OS=Medicago truncatula GN=MtrDRAFT_AC149206g24v2 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.717e-22
Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = -3
Query:  232 CVLILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 444
            C+ + +I   F  V GIRWSSIFYVESIARV + +L GLLLYKLW+ADQIFVQWPQLQQQYPRATYVGRL+
Sbjct:  164 CIPLCVIAFIFK-VLGIRWSSIFYVESIARVRRLSLSGLLLYKLWLADQIFVQWPQLQQQYPRATYVGRLM 233          
BLAST of GR420872 vs. TrEMBL
Match: C6T8K1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.337e-20
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = -3
Query:  232 ICAFA*VF---GIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 423
            +C+ A +F   GIRWSSIFYVESIARV K +L GLLLYKL M DQ+FVQWPQLQ+QYPRATYVGRL+
Sbjct:  167 LCSIAFIFKILGIRWSSIFYVESIARVRKLSLSGLLLYKLRMVDQLFVQWPQLQRQYPRATYVGRLM 233          
BLAST of GR420872 vs. TrEMBL
Match: Q38M46_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.672e-19
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = -3
Query:  232 CVLILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 444
            C+ + +I   F  V GIRWSSIFYVESIARV K +L GLLLYKL MADQ+FVQWPQL+++YPRA YVGRL+
Sbjct:  164 CIPLCVIAFLFK-VLGIRWSSIFYVESIARVRKLSLSGLLLYKLHMADQLFVQWPQLKEKYPRAHYVGRLM 233          
BLAST of GR420872 vs. TrEMBL
Match: B9S5B8_RICCO (UDP-N-acetylglucosamine transferase subunit ALG14, putative OS=Ricinus communis GN=RCOM_1358640 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.043e-18
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = -3
Query:  232 CVLILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 444
            C+ + +I   F  V GI+WS+IFYVESIARV + +L GLLLYKL +ADQ FVQWPQLQ++YPRA YVGRL+
Sbjct:   98 CIPLCVIAFLFK-VVGIKWSTIFYVESIARVQRLSLSGLLLYKLCIADQFFVQWPQLQRKYPRARYVGRLM 167          
BLAST of GR420872 vs. TrEMBL
Match: D7MCV1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493043 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.631e-17
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -3
Query:  232 CVLILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 444
            C+ + +I   F  V GIRWSSIFYVES+ARV K +L G+LLYKL +ADQ FVQWPQLQ +YPRA YVG L+
Sbjct:  164 CIPLCVIAFVFK-VLGIRWSSIFYVESVARVKKLSLSGVLLYKLRIADQFFVQWPQLQNKYPRAHYVGCLM 233          
BLAST of GR420872 vs. TrEMBL
Match: Q84ME6_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g30934 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.436e-17
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = -3
Query:  232 VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 405
            V G+ WSSIFY+ESIARV K +L GLLLYKL +ADQ FVQWPQLQQ+YPRA Y GRL+
Sbjct:  172 VLGLGWSSIFYIESIARVKKLSLSGLLLYKLRIADQFFVQWPQLQQKYPRACYAGRLM 229          
BLAST of GR420872 vs. TrEMBL
Match: Q0DR32_ORYSJ (Os03g0423200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0423200 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.436e-17
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = -3
Query:  232 VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 405
            V G+ WSSIFY+ESIARV K +L GLLLYKL +ADQ FVQWPQLQQ+YPRA Y GRL+
Sbjct:    1 VLGLGWSSIFYIESIARVKKLSLSGLLLYKLRIADQFFVQWPQLQQKYPRACYAGRLM 58          
BLAST of GR420872 vs. TrEMBL
Match: D7TK10_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021402001 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.436e-17
Identity = 47/69 (68.12%), Postives = 53/69 (76.81%), Query Frame = -3
Query:  232 LILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 438
            L L +I     V GIRWSS FYVESIARV + +L GLLLYKL MADQ FVQWPQLQ++YPRA YVG L+
Sbjct:  165 LPLCVIAFLFKVVGIRWSSTFYVESIARVRRLSLSGLLLYKLHMADQFFVQWPQLQKKYPRAHYVGCLM 233          
BLAST of GR420872 vs. TrEMBL
Match: B8AK52_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12109 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.436e-17
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = -3
Query:  232 VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 405
            V G+ WSSIFY+ESIARV K +L GLLLYKL +ADQ FVQWPQLQQ+YPRA Y GRL+
Sbjct:  172 VLGLGWSSIFYIESIARVKKLSLSGLLLYKLRIADQFFVQWPQLQQKYPRACYAGRLM 229          
BLAST of GR420872 vs. TrEMBL
Match: Q84R09_ARATH (Putative uncharacterized protein At4g18230 OS=Arabidopsis thaliana GN=At4g18230 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.488e-17
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -3
Query:  232 CVLILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 444
            C+ + +I   F  V GIRWSSIFYVES+ARV K +L GLLLYKL +ADQ FVQWPQL ++YPRA YVG L+
Sbjct:  164 CIPLCVIAFLFK-VLGIRWSSIFYVESVARVKKLSLSGLLLYKLRIADQFFVQWPQLHKKYPRAHYVGCLM 233          
BLAST of GR420872 vs. TAIR peptide
Match: AT4G18230.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). | chr4:10080521-10081710 REVERSE LENGTH=233)

HSP 1 Score: 90.8929 bits (224), Expect = 3.212e-19
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -3
Query:  232 CVLILLIICAFA*VFGIRWSSIFYVESIARVLKKTLRGLLLYKLWMADQIFVQWPQLQQQYPRATYVGRLI 444
            C+ + +I   F  V GIRWSSIFYVES+ARV K +L GLLLYKL +ADQ FVQWPQL ++YPRA YVG L+
Sbjct:  164 CIPLCVIAFLFK-VLGIRWSSIFYVESVARVKKLSLSGLLLYKLRIADQFFVQWPQLHKKYPRAHYVGCLM 233          
The following BLAST results are available for this feature:
BLAST of GR420872 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
ALG14_RAT8.230e-743.10UDP-N-acetylglucosamine transferase subunit ALG14 ... [more]
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BLAST of GR420872 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HUA0_MEDTR2.717e-2274.65UDP-N-acetylglucosamine transferase subunit ALG14,... [more]
C6T8K1_SOYBN4.337e-2074.63Putative uncharacterized protein OS=Glycine max PE... [more]
Q38M46_SOLTU3.672e-1969.01Putative uncharacterized protein OS=Solanum tubero... [more]
B9S5B8_RICCO9.043e-1864.79UDP-N-acetylglucosamine transferase subunit ALG14,... [more]
D7MCV1_ARALY2.631e-1764.79Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q84ME6_ORYSJ3.436e-1774.14Expressed protein OS=Oryza sativa subsp. japonica ... [more]
Q0DR32_ORYSJ3.436e-1774.14Os03g0423200 protein (Fragment) OS=Oryza sativa su... [more]
D7TK10_VITVI3.436e-1768.12Whole genome shotgun sequence of line PN40024, sca... [more]
B8AK52_ORYSI3.436e-1774.14Putative uncharacterized protein OS=Oryza sativa s... [more]
Q84R09_ARATH4.488e-1764.79Putative uncharacterized protein At4g18230 OS=Arab... [more]
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BLAST of GR420872 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G18230.13.212e-1964.79| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013969Oligosaccharide biosynthesis protein Alg14-likePANTHERPTHR12154GLYCOSYL TRANSFERASE-RELATEDcoord: 1..58
score: 3.8
IPR013969Oligosaccharide biosynthesis protein Alg14-likePFAMPF08660Alg14coord: 3..57
score: 3.1

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420872 ID=GR420872; Name=GR420872; organism=Cicer arietinum; type=EST; length=452bp
GTGTTAAAAAATGTTGAACAAAATCTTGAATAAACACAAAGCAAAAAAAT
AAAATTGTTTACAAGTTGAAAATGAAAAGGACTAAAAAAGTTCATGAACT
TATCACTTACCAATAAAACAAAGCACTGAATGGCCTGCTTTATAGCAATA
TATTTCATGAGCAAAATTTCAAGTTACCTGATTGCACAATAAAAATTTAT
CTTAACCAATGTTCGGTTCATTACACGAAGGAATGAGTCGACCAACATAG
GTAGCTCGGGGATACTGTTGTTGCAACTGTGGCCATTGAACAAAAATTTG
ATCAGCCATCCACAACTTGTATAGGAGCAAGCCACGGAGAGTCTTCTTCA
AAACTCTTGCAATACTCTCAACGTAAAAAATTGATGACCATCTGATTCCG
AATACCTATGCAAAAGCACAAATTATCAAAAGAATTAAAACACATTTCAC
AT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR013969Oligosacch_biosynth_Alg14