HO062210
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO062210 vs. SwissProt
Match: PP176_ARATH (Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana GN=At2g30100 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.660e-21 Identity = 41/78 (52.56%), Postives = 63/78 (80.77%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G F EAAET++ M++ G +P+Y+DRVAVMQG+ ++IQ+ +++ Y+ LCK L++A L+G C+ Y+YI KYKLW+VKM+ Sbjct: 426 GHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYIDKYKLWIVKMM 503
BLAST of HO062210 vs. TrEMBL
Match: B9HNB9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557645 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.859e-25 Identity = 52/78 (66.67%), Postives = 68/78 (87.18%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G + EAAET++KML+LG PDYLDRVAVMQGLRKRIQQ+GN+++Y+KLCK L + NLIG + YLYI+KYKLW++K++ Sbjct: 423 GHYGEAAETLIKMLDLGLSPDYLDRVAVMQGLRKRIQQWGNVESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500
BLAST of HO062210 vs. TrEMBL
Match: B9S5C4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1359400 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.294e-23 Identity = 49/78 (62.82%), Postives = 67/78 (85.90%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G ++EAAE ++KML++G PDYLDRVAV+QGLRKRIQQ+GN+++Y+ LCK L + NLIG + YLYI+KYKLW++KM+ Sbjct: 422 GQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQWGNVESYLNLCKRLSDENLIGPSLVYLYIKKYKLWIMKML 499
BLAST of HO062210 vs. TrEMBL
Match: Q5W767_ORYSJ (Os05g0353300 protein OS=Oryza sativa subsp. japonica GN=OJ1320_D10.7 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.523e-21 Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G + EA+ET+MKML++G YP+YLDR AV+ LR+ IQ+ G+L++Y+KLCK L E +LIG CV YLY+RK+KLW++ M+ Sbjct: 411 GFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRKFKLWMMHML 488
BLAST of HO062210 vs. TrEMBL
Match: B9FHX0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19513 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.523e-21 Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G + EA+ET+MKML++G YP+YLDR AV+ LR+ IQ+ G+L++Y+KLCK L E +LIG CV YLY+RK+KLW++ M+ Sbjct: 383 GFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRKFKLWMMHML 460
BLAST of HO062210 vs. TrEMBL
Match: C5YWA8_SORBI (Putative uncharacterized protein Sb09g016480 OS=Sorghum bicolor GN=Sb09g016480 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.933e-19 Identity = 41/78 (52.56%), Postives = 62/78 (79.49%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G +A+ET+++ML++G +PDYLDR AV+ LR+ IQ+ G+L++Y+KLCK L E +LIG C+ YLY+RK+KLW+ M+ Sbjct: 282 GFILDASETLIQMLDMGLFPDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVRKFKLWMAHML 359
BLAST of HO062210 vs. TrEMBL
Match: C4J5V7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.624e-19 Identity = 41/78 (52.56%), Postives = 61/78 (78.21%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G +A+ET+++ML++G PDYLDR AV+ LR+ IQ+ G+L++Y+KLCK L E +LIG C+ YLY+RK+KLW+ M+ Sbjct: 413 GFILDASETLIQMLDMGLLPDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVRKFKLWMAHML 490
BLAST of HO062210 vs. TrEMBL
Match: A2Y3K7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19589 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.385e-17 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = -2 Query: 283 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRK 489 G + EA+ET+MKML++G YP+YLDR AV+ LR+ IQ+ G+L++Y+KLCK L E +LIG CV YLY+RK Sbjct: 283 GFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRK 351
BLAST of HO062210 vs. TrEMBL
Match: D7SJT8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024686001 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.613e-16 Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = -2 Query: 304 FNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACV 483 F++A+ET++KML+LG P+YLDR AV+QGLR RIQQ GN++TY+KLCK L +ANLIG C+ Sbjct: 293 FDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNVETYLKLCKHLSDANLIGPCL 352
BLAST of HO062210 vs. TrEMBL
Match: A9NXA0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.938e-11 Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = -2 Query: 256 FNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 483 F EAA+T++KML+ G YP+ L+ V++GL+K +Q+ G+ + Y+K+CK L +A LI C+ Y+YI KL +++M+ Sbjct: 442 FEEAAKTLIKMLDKGLYPEKLEITMVLKGLQKSLQKTGHPELYLKICKRLSDAGLIEPCLIYMYIN--KLCIIRML 515
BLAST of HO062210 vs. TrEMBL
Match: D7LBJ7_ARALY (Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901986 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.813e-9 Identity = 27/57 (47.37%), Postives = 45/57 (78.95%), Query Frame = -2 Query: 319 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANL 489 G F EAAET++ M++ G +P+Y+DRVAVMQG+ ++IQ+ ++ Y+ LCK L++A++ Sbjct: 429 GHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVKAYMSLCKRLFDADI 485
BLAST of HO062210 vs. TAIR peptide
Match: AT2G30100.1 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12847828-12849520 FORWARD LENGTH=503) HSP 1 Score: 100.138 bits (248), Expect = 7.200e-22 Identity = 41/78 (52.56%), Postives = 63/78 (80.77%), Query Frame = -2 Query: 256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489 G F EAAET++ M++ G +P+Y+DRVAVMQG+ ++IQ+ +++ Y+ LCK L++A L+G C+ Y+YI KYKLW+VKM+ Sbjct: 426 GHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYIDKYKLWIVKMM 503 The following BLAST results are available for this feature:
BLAST of HO062210 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of HO062210 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO062210 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO062210 ID=HO062210; Name=HO062210; organism=Cicer arietinum; type=EST; length=526bpback to top |