HO062210

EST Overview
NameHO062210
Unique NameHO062210
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length526
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of HO062210 vs. SwissProt
Match: PP176_ARATH (Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana GN=At2g30100 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 6.660e-21
Identity = 41/78 (52.56%), Postives = 63/78 (80.77%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G F EAAET++ M++ G +P+Y+DRVAVMQG+ ++IQ+  +++ Y+ LCK L++A L+G C+ Y+YI KYKLW+VKM+
Sbjct:  426 GHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYIDKYKLWIVKMM 503          
BLAST of HO062210 vs. TrEMBL
Match: B9HNB9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557645 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.859e-25
Identity = 52/78 (66.67%), Postives = 68/78 (87.18%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G + EAAET++KML+LG  PDYLDRVAVMQGLRKRIQQ+GN+++Y+KLCK L + NLIG  + YLYI+KYKLW++K++
Sbjct:  423 GHYGEAAETLIKMLDLGLSPDYLDRVAVMQGLRKRIQQWGNVESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500          
BLAST of HO062210 vs. TrEMBL
Match: B9S5C4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1359400 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.294e-23
Identity = 49/78 (62.82%), Postives = 67/78 (85.90%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G ++EAAE ++KML++G  PDYLDRVAV+QGLRKRIQQ+GN+++Y+ LCK L + NLIG  + YLYI+KYKLW++KM+
Sbjct:  422 GQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQWGNVESYLNLCKRLSDENLIGPSLVYLYIKKYKLWIMKML 499          
BLAST of HO062210 vs. TrEMBL
Match: Q5W767_ORYSJ (Os05g0353300 protein OS=Oryza sativa subsp. japonica GN=OJ1320_D10.7 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.523e-21
Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G + EA+ET+MKML++G YP+YLDR AV+  LR+ IQ+ G+L++Y+KLCK L E +LIG CV YLY+RK+KLW++ M+
Sbjct:  411 GFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRKFKLWMMHML 488          
BLAST of HO062210 vs. TrEMBL
Match: B9FHX0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19513 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.523e-21
Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G + EA+ET+MKML++G YP+YLDR AV+  LR+ IQ+ G+L++Y+KLCK L E +LIG CV YLY+RK+KLW++ M+
Sbjct:  383 GFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRKFKLWMMHML 460          
BLAST of HO062210 vs. TrEMBL
Match: C5YWA8_SORBI (Putative uncharacterized protein Sb09g016480 OS=Sorghum bicolor GN=Sb09g016480 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.933e-19
Identity = 41/78 (52.56%), Postives = 62/78 (79.49%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G   +A+ET+++ML++G +PDYLDR AV+  LR+ IQ+ G+L++Y+KLCK L E +LIG C+ YLY+RK+KLW+  M+
Sbjct:  282 GFILDASETLIQMLDMGLFPDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVRKFKLWMAHML 359          
BLAST of HO062210 vs. TrEMBL
Match: C4J5V7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.624e-19
Identity = 41/78 (52.56%), Postives = 61/78 (78.21%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G   +A+ET+++ML++G  PDYLDR AV+  LR+ IQ+ G+L++Y+KLCK L E +LIG C+ YLY+RK+KLW+  M+
Sbjct:  413 GFILDASETLIQMLDMGLLPDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVRKFKLWMAHML 490          
BLAST of HO062210 vs. TrEMBL
Match: A2Y3K7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19589 PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.385e-17
Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = -2
Query:  283 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRK 489
            G + EA+ET+MKML++G YP+YLDR AV+  LR+ IQ+ G+L++Y+KLCK L E +LIG CV YLY+RK
Sbjct:  283 GFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRK 351          
BLAST of HO062210 vs. TrEMBL
Match: D7SJT8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024686001 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.613e-16
Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = -2
Query:  304 FNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACV 483
            F++A+ET++KML+LG  P+YLDR AV+QGLR RIQQ GN++TY+KLCK L +ANLIG C+
Sbjct:  293 FDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNVETYLKLCKHLSDANLIGPCL 352          
BLAST of HO062210 vs. TrEMBL
Match: A9NXA0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.938e-11
Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = -2
Query:  256 FNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 483
            F EAA+T++KML+ G YP+ L+   V++GL+K +Q+ G+ + Y+K+CK L +A LI  C+ Y+YI   KL +++M+
Sbjct:  442 FEEAAKTLIKMLDKGLYPEKLEITMVLKGLQKSLQKTGHPELYLKICKRLSDAGLIEPCLIYMYIN--KLCIIRML 515          
BLAST of HO062210 vs. TrEMBL
Match: D7LBJ7_ARALY (Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901986 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.813e-9
Identity = 27/57 (47.37%), Postives = 45/57 (78.95%), Query Frame = -2
Query:  319 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANL 489
            G F EAAET++ M++ G +P+Y+DRVAVMQG+ ++IQ+  ++  Y+ LCK L++A++
Sbjct:  429 GHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVKAYMSLCKRLFDADI 485          
BLAST of HO062210 vs. TAIR peptide
Match: AT2G30100.1 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12847828-12849520 FORWARD LENGTH=503)

HSP 1 Score: 100.138 bits (248), Expect = 7.200e-22
Identity = 41/78 (52.56%), Postives = 63/78 (80.77%), Query Frame = -2
Query:  256 GTFNEAAETVMKMLELGFYPDYLDRVAVMQGLRKRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 489
            G F EAAET++ M++ G +P+Y+DRVAVMQG+ ++IQ+  +++ Y+ LCK L++A L+G C+ Y+YI KYKLW+VKM+
Sbjct:  426 GHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYIDKYKLWIVKMM 503          
The following BLAST results are available for this feature:
BLAST of HO062210 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PP176_ARATH6.660e-2152.56Pentatricopeptide repeat-containing protein At2g30... [more]
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BLAST of HO062210 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HNB9_POPTR6.859e-2566.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S5C4_RICCO1.294e-2362.82Putative uncharacterized protein OS=Ricinus commun... [more]
Q5W767_ORYSJ3.523e-2157.69Os05g0353300 protein OS=Oryza sativa subsp. japoni... [more]
B9FHX0_ORYSJ3.523e-2157.69Putative uncharacterized protein OS=Oryza sativa s... [more]
C5YWA8_SORBI1.933e-1952.56Putative uncharacterized protein Sb09g016480 OS=So... [more]
C4J5V7_MAIZE5.624e-1952.56Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
A2Y3K7_ORYSI1.385e-1759.42Putative uncharacterized protein OS=Oryza sativa s... [more]
D7SJT8_VITVI2.613e-1665.00Whole genome shotgun sequence of line PN40024, sca... [more]
A9NXA0_PICSI1.938e-1143.42Putative uncharacterized protein OS=Picea sitchens... [more]
D7LBJ7_ARALY1.813e-947.37Ubiquitin family protein OS=Arabidopsis lyrata sub... [more]
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BLAST of HO062210 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G30100.17.200e-2252.56| Symbols: | pentatricopeptide (PPR) repeat-conta... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062210 ID=HO062210; Name=HO062210; organism=Cicer arietinum; type=EST; length=526bp
CTGTAACATGAAGTTGAAGCAACAAGCAAGAGTATAATCACATGAGAGTG
CCATAAGTAAGATCCGAATTATTTATCATACATAATACTCATTACCATAA
CATTGCACTGCCACTAGAATTGGTCCATTAATTTGACATTAAACCTATAC
AACTTTATACAACTAACCAAGCACCAACAAAACCAGTGCTCTAGCTATGC
CTTCAAAACCAAAGGTTTGAAAATTGGCAGTGTTTTCCAAGTACACATTT
TCTCATATCATTTTCACCACCCAAAGCTTATATTTTCTTATATACAAATA
ACAAACACAAGCTCCAATCAAATTTGCTTCATATAGTGACTTACAAAGCT
TGATATAAGTATCTAAATTTCCATATTGCTGTATCCTTTTTCTCAAACCC
TGCATAACAGCAACTCTATCCAAATAATCAGGATAGAATCCCAATTCAAG
CATTTTCATTACAGTCTCTGCAGCTTCATTAAATGTCCCCTTTTAATGTA
CCTGCCCGGGCGGCCGTTCGAAATCG
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