HO063851

EST Overview
NameHO063851
Unique NameHO063851
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length335
Libraries
Library NameType
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO063851 vs. TrEMBL
Match: D7SMB0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000538001 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.843e-8
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 2
Query:   95 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTS------ITNTSYSP 253
            MGLSN+   AEGVLPVLVMNTV+ VALLKN+ +S+LQV+G   +S       +N  YSP
Sbjct:    1 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSP 59          
BLAST of HO063851 vs. TrEMBL
Match: A5C5W4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010591 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.843e-8
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 2
Query:   95 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTS------ITNTSYSP 253
            MGLSN+   AEGVLPVLVMNTV+ VALLKN+ +S+LQV+G   +S       +N  YSP
Sbjct:  469 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSP 527          
BLAST of HO063851 vs. TrEMBL
Match: B9SVL9_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0793900 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.249e-7
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 2
Query:   95 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVV 211
            MGLS++P AAEGVLPVLVMNTVL VAL KN  +++LQVV
Sbjct:    1 MGLSSFPSAAEGVLPVLVMNTVLSVALFKNWVRALLQVV 39          
BLAST of HO063851 vs. TrEMBL
Match: B9HTS5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_804914 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.249e-7
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 2
Query:   95 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVV 211
            MGLS++P AAEGVLPVLVMNTVL VALLK++ +S+LQ+V
Sbjct:    1 MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLV 39          
BLAST of HO063851 vs. TrEMBL
Match: D7KAL6_ARALY (F21J9.24 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890213 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.465e-7
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 2
Query:   95 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNTSYSP 253
            MGLS++P A+EGVLP+LVMNTV+ V LLKN+ +S+ Q+V     S     + P
Sbjct:    1 MGLSHFPTASEGVLPLLVMNTVVSVTLLKNMVRSVFQIVASETESSMEIEHEP 53          
BLAST of HO063851 vs. TAIR peptide
Match: AT1G67856.1 (| Symbols: | RING/U-box superfamily protein | chr1:25442486-25442887 FORWARD LENGTH=133)

HSP 1 Score: 51.9878 bits (123), Expect = 8.987e-8
Identity = 23/48 (47.92%), Postives = 36/48 (75.00%), Query Frame = 2
Query:   95 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITN 238
            MG+S+YP A+EGV+P+LVMNTV+ V+L+KN+ +S++ +V        N
Sbjct:    1 MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARN 48          
The following BLAST results are available for this feature:
BLAST of HO063851 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
D7SMB0_VITVI3.843e-857.63Whole genome shotgun sequence of line PN40024, sca... [more]
A5C5W4_VITVI3.843e-857.63Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SVL9_RICCO4.249e-774.36Protein binding protein, putative OS=Ricinus commu... [more]
B9HTS5_POPTR4.249e-774.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7KAL6_ARALY9.465e-750.94F21J9.24 OS=Arabidopsis lyrata subsp. lyrata GN=AR... [more]
back to top
BLAST of HO063851 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G67856.18.987e-847.92| Symbols: | RING/U-box superfamily protein | chr... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 62..78
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063851 ID=HO063851; Name=HO063851; organism=Cicer arietinum; type=EST; length=335bp
GGCGGCCGCGGGAATTCGATTAGCGTGGTCGCGGCCGAGGTACGCGGGGA
ATTAAAAAAGCAAGGCAATTAATTGAGTTTCAATTTTGAGAGTAATGGGC
CTCTCAAATTATCCTTGTGCAGCAGAAGGTGTGTTACCTGTGCTTGTGAT
GAACACGGTTTTGTATGTGGCTTTATTAAAGAACATATTCAAATCCATGC
TTCAAGTAGTTGGTTGCACAAGAACATCAATCACCAATACATCTTATTCA
CCAAATATTGAGGAAGAAGAAGAAGAACAAGAGTCCCAATTAGAAGAGAG
GGAAAGGAGGGTGTCAATAAGACAGTACCTGCCCG
back to top