DY475317
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY475317 vs. SwissProt
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 5.919e-8 Identity = 27/43 (62.79%), Postives = 28/43 (65.12%), Query Frame = 2 Query: 83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKG 211 GGG L CI S P QCG G IL GKEL FY + LQR KGKG Sbjct: 174 GGGKLLACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKG 216
BLAST of DY475317 vs. SwissProt
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 2.938e-7 Identity = 26/43 (60.47%), Postives = 27/43 (62.79%), Query Frame = 2 Query: 83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKG 211 G G L CI S P QCG G IL GKEL FY + LQR KGKG Sbjct: 175 GSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKG 217
BLAST of DY475317 vs. TrEMBL
Match: C6T968_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.540e-7 Identity = 28/45 (62.22%), Postives = 29/45 (64.44%), Query Frame = 2 Query: 83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXA 217 GGG L CI S P QCG G IL GKEL FY + LQR KGKG A Sbjct: 173 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217
BLAST of DY475317 vs. TrEMBL
Match: C6T3Z7_SOYBN (Ribosomal protein S8 (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.540e-7 Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = 2 Query: 83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXAXL*CXPSY 241 GGG L CI S P QCG G IL GKEL FY + LQ+ KG+G C SY Sbjct: 175 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGQGCCLRYCLSSY 227
BLAST of DY475317 vs. TrEMBL
Match: C6T0G7_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.540e-7 Identity = 28/45 (62.22%), Postives = 29/45 (64.44%), Query Frame = 2 Query: 83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXA 217 GGG L CI S P QCG G IL GKEL FY + LQR KGKG A Sbjct: 173 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217
BLAST of DY475317 vs. TrEMBL
Match: C6T514_SOYBN (Ribosomal protein S8 (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.451e-7 Identity = 27/54 (50.00%), Postives = 32/54 (59.26%), Query Frame = 2 Query: 83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXAXL*CXPSYI 244 GGG L CI S P QCG G IL GKEL FY + LQ+ KGKG + P ++ Sbjct: 175 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGCCLILVFPIFL 228
BLAST of DY475317 vs. TAIR peptide
Match: AT5G20290.1 (| Symbols: | Ribosomal protein S8e family protein | chr5:6851695-6853012 REVERSE LENGTH=222) HSP 1 Score: 50.8322 bits (120), Expect = 2.015e-7 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 2 Query: 89 GXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXA 217 G L CI S P QCG G IL GKEL FY + +Q+ KGKG A Sbjct: 180 GRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA 222 The following BLAST results are available for this feature:
BLAST of DY475317 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of DY475317 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of DY475317 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY475317 ID=DY475317; Name=DY475317; organism=Cicer arietinum; type=EST; length=254bpback to top |