DY475317

EST Overview
NameDY475317
Unique NameDY475317
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length254
Libraries
Library NameType
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of DY475317 vs. SwissProt
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 5.919e-8
Identity = 27/43 (62.79%), Postives = 28/43 (65.12%), Query Frame = 2
Query:   83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKG 211
            GGG L  CI S P QCG   G IL GKEL FY + LQR KGKG
Sbjct:  174 GGGKLLACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKG 216          
BLAST of DY475317 vs. SwissProt
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 2.938e-7
Identity = 26/43 (60.47%), Postives = 27/43 (62.79%), Query Frame = 2
Query:   83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKG 211
            G G L  CI S P QCG   G IL GKEL FY + LQR KGKG
Sbjct:  175 GSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKG 217          
BLAST of DY475317 vs. TrEMBL
Match: C6T968_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.540e-7
Identity = 28/45 (62.22%), Postives = 29/45 (64.44%), Query Frame = 2
Query:   83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXA 217
            GGG L  CI S P QCG   G IL GKEL FY + LQR KGKG A
Sbjct:  173 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217          
BLAST of DY475317 vs. TrEMBL
Match: C6T3Z7_SOYBN (Ribosomal protein S8 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.540e-7
Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = 2
Query:   83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXAXL*CXPSY 241
            GGG L  CI S P QCG   G IL GKEL FY + LQ+ KG+G     C  SY
Sbjct:  175 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGQGCCLRYCLSSY 227          
BLAST of DY475317 vs. TrEMBL
Match: C6T0G7_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.540e-7
Identity = 28/45 (62.22%), Postives = 29/45 (64.44%), Query Frame = 2
Query:   83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXA 217
            GGG L  CI S P QCG   G IL GKEL FY + LQR KGKG A
Sbjct:  173 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217          
BLAST of DY475317 vs. TrEMBL
Match: C6T514_SOYBN (Ribosomal protein S8 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.451e-7
Identity = 27/54 (50.00%), Postives = 32/54 (59.26%), Query Frame = 2
Query:   83 GGGXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXAXL*CXPSYI 244
            GGG L  CI S P QCG   G IL GKEL FY + LQ+ KGKG   +   P ++
Sbjct:  175 GGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGCCLILVFPIFL 228          
BLAST of DY475317 vs. TAIR peptide
Match: AT5G20290.1 (| Symbols: | Ribosomal protein S8e family protein | chr5:6851695-6853012 REVERSE LENGTH=222)

HSP 1 Score: 50.8322 bits (120), Expect = 2.015e-7
Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 2
Query:   89 GXLXXCIXSPPAQCGGXXGXILXGKELXFYXQXLQRXKGKGXA 217
            G L  CI S P QCG   G IL GKEL FY + +Q+ KGKG A
Sbjct:  180 GRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA 222          
The following BLAST results are available for this feature:
BLAST of DY475317 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
RS8_PRUAR5.919e-862.7940S ribosomal protein S8 OS=Prunus armeniaca GN=RP... [more]
RS8_ORYSJ2.938e-760.4740S ribosomal protein S8 OS=Oryza sativa subsp. ja... [more]
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BLAST of DY475317 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6T968_SOYBN5.540e-762.22Ribosomal protein S8 OS=Glycine max PE=2 SV=1[more]
C6T3Z7_SOYBN5.540e-752.83Ribosomal protein S8 (Fragment) OS=Glycine max PE=... [more]
C6T0G7_SOYBN5.540e-762.22Ribosomal protein S8 OS=Glycine max PE=2 SV=1[more]
C6T514_SOYBN9.451e-750.00Ribosomal protein S8 (Fragment) OS=Glycine max PE=... [more]
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BLAST of DY475317 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G20290.12.015e-755.81| Symbols: | Ribosomal protein S8e family protein... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 26..65
score: 9.7
NoneNo IPR availablePANTHERPTHR10394:SF140S RIBOSOMAL PROTEIN S8coord: 26..65
score: 9.7
NoneNo IPR availableSEGsegsegcoord: 2..14
score: NAcoord: 17..27
score: NAcoord: 40..45
score
NoneNo IPR availableSEGsegsegcoord: 10..16
score: NAcoord: 26..30
score
NoneNo IPR availableSEGsegsegcoord: 51..58
score: NAcoord: 70..84
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DY475317 ID=DY475317; Name=DY475317; organism=Cicer arietinum; type=EST; length=254bp
GTTGNCCTAANGGCGANTCCTCCNCGGCGACCTGGGGGNCCCGGNAATTC
TATTAAGCAGGGGNACCNACGNAGANNACGCGGGGGGGGGNCNTTTGNTG
NNCTGTATTTNNTCNCCCCCTGCTCAATGCGGGGGGGNTGANGGGNACAT
CCTTNAAGGTAAGGAACTGNAATTTTACNTGCAAAANTTACAGAGGNANA
AGGGAAAGGGTGNTGCTNAATTGTAGTGTTNNCCGTCTTATATATGACTT
CATT
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