DY475419

EST Overview


Name	DY475419
Unique Name	DY475419
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	255

Libraries


Library Name	Type
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of DY475419 vs. TrEMBL
Match: B9SHQ3_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0742410 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.731e-9
Identity = 34/71 (47.89%), Postives = 37/71 (52.11%), Query Frame = 3

Query:    3 YSAAPTAQPGYAQPTPTQTGYDQSNXXXXXXXXXXXXXXXXXXXXXXXXKTVSPQPAYPQYDSNQVYGAPR 215
            Y+A  + Q GYAQPTPTQ  YDQS                         KTVSPQP YPQYDS Q+Y APR
Sbjct:  732 YAAPASGQQGYAQPTPTQPSYDQS----VPQSTAYAAAAPPASAPVSYGKTVSPQPGYPQYDSTQMYAAPR 798

[Close]

BLAST of DY475419 vs. TrEMBL
Match: B9IQ97_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574172 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.249e-8
Identity = 33/68 (48.53%), Postives = 35/68 (51.47%), Query Frame = 3

Query:   12 APTAQPGYAQPTPTQTGYDQSNXXXXXXXXXXXXXXXXXXXXXXXXKTVSPQPAYPQYDSNQVYGAPR 215
            AP +Q GYAQP PTQ  YDQS                         KTVSPQP YPQYDS Q+Y APR
Sbjct:  520 APASQQGYAQPAPTQPSYDQS------VPQSAGYGAAPATAPVGYGKTVSPQPGYPQYDSTQMYAAPR 581

The following BLAST results are available for this feature:

BLAST of DY475419 vs. TrEMBL

BLAST of DY475419 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
B9SHQ3_RICCO	7.731e-9	47.89	Nucleic acid binding protein, putative OS=Ricinus ...	[more]
B9IQ97_POPTR	2.249e-8	48.53	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 33..47 score
None	No IPR available	SEG	seg	seg	coord: 26..49 score
None	No IPR available	SEG	seg	seg	coord: 43..59 score
None	No IPR available	SEG	seg	seg	coord: 21..27 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY475419 ID=DY475419; Name=DY475419; organism=Cicer arietinum; type=EST; length=255bp
CATATAGTGCAGCACCAACCGCTCAGCCAGGTTATGCTCAACCCACACCA
ACTCAAACTGGTTATGATCAATCTAACCCACAACCACAACCACAACCAGC
AGGTTATGCAGCTGTACCAGTGGCAGCAAGTGCTCCTGCTGCGTATGGCA
AGACAGTATCACCTCAGCCTGCTTATCCTCAGTATGACTCCAACCAAGTT
TATGGTGCTCCTCGATGATTTGTTTTGGCATTGTTGGCCATATTTTAGTA
TTAGC

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