DY475550

EST Overview


Name	DY475550
Unique Name	DY475550
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	255

Libraries


Library Name	Type
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of DY475550 vs. SwissProt
Match: PR19B_ARATH (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana GN=PRP19B PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 2.312e-28
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+ S+VKIW VKSQANVAKFDGH G VTA+SFSENGY+LATAA DGV+LWDLRKL+NF++F   D+    +SVEFD S
Sbjct:  366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADA----NSVEFDPS 445

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BLAST of DY475550 vs. SwissProt
Match: PR19A_ARATH (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana GN=PRP19A PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.498e-27
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT  S+VKIW VKSQANVAKF GH G +T++SFSENGY+LATAA DGV+LWDLRKLKNFR F   D+    +SVEFDHS
Sbjct:  367 LILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWDLRKLKNFRTFDFPDA----NSVEFDHS 446

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BLAST of DY475550 vs. SwissProt
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.040e-20
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHD-GVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LI GTGT DS +KIW +K + NVA F GH G +T+++FSENGYYLATAA D  VKLWDLRKLKNF+     D+     S+ FD S
Sbjct:  363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQS 446

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BLAST of DY475550 vs. SwissProt
Match: PRP19_MOUSE (Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.040e-20
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHD-GVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LI GTGT DS +KIW +K + NVA F GH G +T+++FSENGYYLATAA D  VKLWDLRKLKNF+     D+     S+ FD S
Sbjct:  363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQS 446

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BLAST of DY475550 vs. SwissProt
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.040e-20
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHD-GVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LI GTGT DS +KIW +K + NVA F GH G +T+++FSENGYYLATAA D  VKLWDLRKLKNF+     D+     S+ FD S
Sbjct:  363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQS 446

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BLAST of DY475550 vs. SwissProt
Match: PRP19_CHICK (Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.040e-20
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHD-GVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LI GTGT DS +KIW +K + NVA F GH G +T+++FSENGYYLATAA D  VKLWDLRKLKNF+     D+     S+ FD S
Sbjct:  364 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQS 447

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BLAST of DY475550 vs. SwissProt
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.040e-20
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHD-GVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LI GTGT DS +KIW +K + NVA F GH G +T+++FSENGYYLATAA D  VKLWDLRKLKNF+     D+     S+ FD S
Sbjct:  363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQS 446

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BLAST of DY475550 vs. SwissProt
Match: PRP19_CAEEL (Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans GN=T10F2.4 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.346e-19
Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDG-VKLWDLRKLKNFRNFAPYDSETPTSSVEFD 247
            LI GTG  D++VKIW +K+Q   A F GH   V +++FSENGYYLAT + DG VKLWDLRKLKN + FA  + + P +S+ FD
Sbjct:  351 LIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFA-NEEKQPINSLSFD 432

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BLAST of DY475550 vs. SwissProt
Match: PRP19_DICDI (Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum GN=prp19 PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.470e-8
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRK--LKNFRNFAPYDSET-PTSSVEFDHS 253
            +    GT + +VKI+ +KS+ N   F G    V  +SFSENGYYL  A ++ VKL+DLRK   KN  +      +     S+ FD+S
Sbjct:  365 MFFAAGTQNGVVKIFDLKSKVNSFNFQGLSTAVNCISFSENGYYLTAADNNTVKLFDLRKAATKNSPDIQTITLDNQQIKSINFDYS 451

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BLAST of DY475550 vs. SwissProt
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 5.919e-8
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 2

Query:    8 LGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHD-GVKLWDL 175
            L TG+TD  V++W  +   +V  F GH G V ++SFS NG YLA+A  D  +KLWDL
Sbjct:  441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL 497

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BLAST of DY475550 vs. TrEMBL
Match: D7SZN5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027911001 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.809e-35
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+++LVKIW VKSQANVA+FDGHVG VTA+SFSENGY+LATAAHDGVKLWDLRKL+NFR F PYDS T T+SVEFDHS
Sbjct:  368 LILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHS 451

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BLAST of DY475550 vs. TrEMBL
Match: A5BPJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037044 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.809e-35
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+++LVKIW VKSQANVA+FDGHVG VTA+SFSENGY+LATAAHDGVKLWDLRKL+NFR F PYDS T T+SVEFDHS
Sbjct:   91 LILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHS 174

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BLAST of DY475550 vs. TrEMBL
Match: B6TRQ7_MAIZE (Pre-mRNA-splicing factor 19 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.827e-34
Identity = 68/84 (80.95%), Postives = 80/84 (95.24%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGTTD++VKIW VK+Q+NVAKF+GHVG VTA+SFSENGY+LATAAHDGVKLWDLRKL+NFR F+PYDS+TPT++VEFD S
Sbjct:  365 LILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFS 448

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BLAST of DY475550 vs. TrEMBL
Match: C5WZD1_SORBI (Putative uncharacterized protein Sb01g019790 OS=Sorghum bicolor GN=Sb01g019790 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.317e-34
Identity = 67/84 (79.76%), Postives = 79/84 (94.05%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGTTD++ KIW VK+Q+NVAKF+GHVG VTA+SFSENGY+LATAAHDGVKLWDLRKL+NFR F+PYDS+TPT++VEFD S
Sbjct:  374 LILGTGTTDAVAKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFS 457

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BLAST of DY475550 vs. TrEMBL
Match: D5A9Q1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.944e-34
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGTT+SLV+IW VK+QANVAKFDGH G VT +SFSENGY+LATA +DGVKLWDLRKLKNFR F PYDS TPT+SV+FDHS
Sbjct:  369 LILGTGTTESLVRIWDVKTQANVAKFDGHSGAVTDISFSENGYFLATAGYDGVKLWDLRKLKNFRTFTPYDSNTPTNSVQFDHS 452

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BLAST of DY475550 vs. TrEMBL
Match: B4FAF0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.069e-34
Identity = 67/84 (79.76%), Postives = 79/84 (94.05%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGTTD++VKIW VK+Q+NVAKF+GHVG VTA+SFSENGY+LATAAHDGVKLWDLRKL+NFR F+PYD +TPT++VEFD S
Sbjct:  365 LILGTGTTDAVVKIWDVKAQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDLDTPTNTVEFDFS 448

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BLAST of DY475550 vs. TrEMBL
Match: B9HKU6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820827 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.639e-33
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT++++VKIW VKSQANVAKF+GHVG VTA+SFSENGY+LATAAHD VKLWDLRKLKNFR    YDS+TPT+SVEFDHS
Sbjct:  368 LILGTGTSEAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLATAAHDSVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHS 451

[Close]

BLAST of DY475550 vs. TrEMBL
Match: D5A8W8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.501e-33
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGTT+SLV+IW VK+QANVAKFDGH G VT +SFSENGY+LATA + GVKLWDLRKLKNFR F PYDS TPT+SV+FDHS
Sbjct:  369 LILGTGTTESLVRIWDVKTQANVAKFDGHSGAVTDISFSENGYFLATAGYGGVKLWDLRKLKNFRTFTPYDSNTPTNSVQFDHS 452

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BLAST of DY475550 vs. TrEMBL
Match: B9SQU0_RICCO (Pre-mRNA-splicing factor, putative OS=Ricinus communis GN=RCOM_1217560 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.501e-33
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+D++VKIW VKSQANVAKF+GHVG VTA+SFSENGY+LATAA+D VKLWDLRKLKNFR    YDS+TPT+SVEFDHS
Sbjct:  375 LILGTGTSDAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLATAAYDSVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHS 458

[Close]

BLAST of DY475550 vs. TrEMBL
Match: B9HST8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565819 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.878e-33
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT++++VKIW VKSQANVAKF+GHVG VTA++FSENGY+LATAAHD VKLWDLRKLKNFR    YDS+TPT+SVEFDHS
Sbjct:  368 LILGTGTSEAVVKIWDVKSQANVAKFEGHVGPVTAITFSENGYFLATAAHDSVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHS 451

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT2G33340.3 (| Symbols: MAC3B | MOS4-associated complex 3B | chr2:14126703-14131000 REVERSE LENGTH=485)

HSP 1 Score: 124.02 bits (310), Expect = 1.873e-29
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+ S+VKIW VKSQANVAKFDGH G VTA+SFSENGY+LATAA DGV+LWDLRKL+NF++F   D+    +SVEFD S
Sbjct:  366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADA----NSVEFDPS 445

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT2G33340.2 (| Symbols: MAC3B | MOS4-associated complex 3B | chr2:14126584-14131000 REVERSE LENGTH=525)

HSP 1 Score: 124.02 bits (310), Expect = 1.873e-29
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+ S+VKIW VKSQANVAKFDGH G VTA+SFSENGY+LATAA DGV+LWDLRKL+NF++F   D+    +SVEFD S
Sbjct:  366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADA----NSVEFDPS 445

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT2G33340.1 (| Symbols: MAC3B | MOS4-associated complex 3B | chr2:14126584-14131000 REVERSE LENGTH=525)

HSP 1 Score: 124.02 bits (310), Expect = 1.873e-29
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT+ S+VKIW VKSQANVAKFDGH G VTA+SFSENGY+LATAA DGV+LWDLRKL+NF++F   D+    +SVEFD S
Sbjct:  366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADA----NSVEFDPS 445

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT1G04510.2 (| Symbols: MAC3A | MOS4-associated complex 3A | chr1:1226749-1230592 FORWARD LENGTH=523)

HSP 1 Score: 121.324 bits (303), Expect = 1.214e-28
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT  S+VKIW VKSQANVAKF GH G +T++SFSENGY+LATAA DGV+LWDLRKLKNFR F   D+    +SVEFDHS
Sbjct:  367 LILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWDLRKLKNFRTFDFPDA----NSVEFDHS 446

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT1G04510.1 (| Symbols: MAC3A | MOS4-associated complex 3A | chr1:1226749-1230592 FORWARD LENGTH=523)

HSP 1 Score: 121.324 bits (303), Expect = 1.214e-28
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 2

Query:    2 LILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHS 253
            LILGTGT  S+VKIW VKSQANVAKF GH G +T++SFSENGY+LATAA DGV+LWDLRKLKNFR F   D+    +SVEFDHS
Sbjct:  367 LILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWDLRKLKNFRTFDFPDA----NSVEFDHS 446

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT2G05720.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:2147192-2148215 FORWARD LENGTH=276)

HSP 1 Score: 54.299 bits (129), Expect = 1.823e-8
Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 2

Query:   26 DSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDG-VKLWDLRKLK 187
            DSL ++W +++  N+  F GH+  V +V FS NGY+LA+   D   ++WDLR  K
Sbjct:  151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT2G41500.1 (| Symbols: LIS, EMB2776 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | chr2:17304319-17306855 REVERSE LENGTH=554)

HSP 1 Score: 51.9878 bits (123), Expect = 9.046e-8
Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 2

Query:   26 DSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDG-VKLWDLRKLKN 190
            DSL ++W +++  ++  F GH+  V +V+FS NGY+LA+   D   ++WDLR  K+
Sbjct:  402 DSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT1G15440.2 (| Symbols: PWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=860)

HSP 1 Score: 51.2174 bits (121), Expect = 1.543e-7
Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 2

Query:    5 ILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDG-VKLWDLRKLKNFRNFAPYDSETPTSSV 238
            +L TG  D+ VK+W V S      F  H   VTA+ F  + + L +A+ DG V+ WD ++ KN++    Y + TP   V
Sbjct:  363 LLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT---YTTPTPRQFV 438

[Close]

BLAST of DY475550 vs. TAIR peptide
Match: AT1G15440.1 (| Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=900)

HSP 1 Score: 51.2174 bits (121), Expect = 1.543e-7
Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 2

Query:    5 ILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDG-VKLWDLRKLKNFRNFAPYDSETPTSSV 238
            +L TG  D+ VK+W V S      F  H   VTA+ F  + + L +A+ DG V+ WD ++ KN++    Y + TP   V
Sbjct:  403 LLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT---YTTPTPRQFV 478

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BLAST of DY475550 vs. TAIR peptide
Match: AT5G13480.2 (| Symbols: FY | Transducin/WD40 repeat-like superfamily protein | chr5:4326638-4331506 REVERSE LENGTH=653)

HSP 1 Score: 50.447 bits (119), Expect = 2.632e-7
Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 2

Query:    5 ILGTGTTDSLVKIWXVKSQANVAKFDGHVGHVTAVSFSENGYYLATAAHDG-VKLWDLRKLKNFRNF 202
            +L +G  D LVK+W  +S   +    GH   V +V +++NG +L TA+ D  +KL+D+R +K  ++F
Sbjct:  269 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSF 335

The following BLAST results are available for this feature:

BLAST of DY475550 vs. SwissProt
BLAST of DY475550 vs. TrEMBL
BLAST of DY475550 vs. TAIR peptide

BLAST of DY475550 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PR19B_ARATH	2.312e-28	72.62	Pre-mRNA-processing factor 19 homolog 2 OS=Arabido...	[more]
PR19A_ARATH	1.498e-27	72.62	Pre-mRNA-processing factor 19 homolog 1 OS=Arabido...	[more]
PRP19_RAT	1.040e-20	58.82	Pre-mRNA-processing factor 19 OS=Rattus norvegicus...	[more]
PRP19_MOUSE	1.040e-20	58.82	Pre-mRNA-processing factor 19 OS=Mus musculus GN=P...	[more]
PRP19_HUMAN	1.040e-20	58.82	Pre-mRNA-processing factor 19 OS=Homo sapiens GN=P...	[more]
PRP19_CHICK	1.040e-20	58.82	Pre-mRNA-processing factor 19 OS=Gallus gallus GN=...	[more]
PRP19_BOVIN	1.040e-20	58.82	Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRP...	[more]
PRP19_CAEEL	3.346e-19	55.42	Pre-mRNA-processing factor 19 homolog OS=Caenorhab...	[more]
PRP19_DICDI	3.470e-8	39.08	Pre-mRNA-processing factor 19 homolog OS=Dictyoste...	[more]
TAF5L_MOUSE	5.919e-8	49.12	TAF5-like RNA polymerase II p300/CBP-associated fa...	[more]

BLAST of DY475550 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SZN5_VITVI	4.809e-35	83.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BPJ9_VITVI	4.809e-35	83.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B6TRQ7_MAIZE	1.827e-34	80.95	Pre-mRNA-splicing factor 19 OS=Zea mays PE=2 SV=1	[more]
C5WZD1_SORBI	5.317e-34	79.76	Putative uncharacterized protein Sb01g019790 OS=So...	[more]
D5A9Q1_PICSI	6.944e-34	80.95	Putative uncharacterized protein OS=Picea sitchens...	[more]
B4FAF0_MAIZE	9.069e-34	79.76	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B9HKU6_POPTR	2.639e-33	80.95	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D5A8W8_PICSI	4.501e-33	79.76	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9SQU0_RICCO	4.501e-33	80.95	Pre-mRNA-splicing factor, putative OS=Ricinus comm...	[more]
B9HST8_POPTR	5.878e-33	79.76	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of DY475550 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G33340.3	1.873e-29	72.62	\| Symbols: MAC3B \| MOS4-associated complex 3B \| c...	[more]
AT2G33340.2	1.873e-29	72.62	\| Symbols: MAC3B \| MOS4-associated complex 3B \| c...	[more]
AT2G33340.1	1.873e-29	72.62	\| Symbols: MAC3B \| MOS4-associated complex 3B \| c...	[more]
AT1G04510.2	1.214e-28	72.62	\| Symbols: MAC3A \| MOS4-associated complex 3A \| c...	[more]
AT1G04510.1	1.214e-28	72.62	\| Symbols: MAC3A \| MOS4-associated complex 3A \| c...	[more]
AT2G05720.1	1.823e-8	41.82	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT2G41500.1	9.046e-8	39.29	\| Symbols: LIS, EMB2776 \| WD-40 repeat family prot...	[more]
AT1G15440.2	1.543e-7	35.44	\| Symbols: PWP2 \| periodic tryptophan protein 2 \| ...	[more]
AT1G15440.1	1.543e-7	35.44	\| Symbols: PWP2, ATPWP2 \| periodic tryptophan prot...	[more]
AT5G13480.2	2.632e-7	35.82	\| Symbols: FY \| Transducin/WD40 repeat-like superf...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	no description	coord: 19..57 score: 1.6
IPR011046	WD40 repeat-like-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..82 score: 2.9
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10	no description	coord: 3..83 score: 1.4
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 1..66 score: 15
IPR019781	WD40 repeat, subgroup	PFAM	PF00400	WD40	coord: 23..57 score: 1.1
IPR019782	WD40 repeat 2	PROFILE	PS50082	WD_REPEATS_2	coord: 1..25 score: 8.537coord: 26..66 score: 10
None	No IPR available	PANTHER	PTHR13889	PRE-MRNA SPLICING FACTOR PRP19-RELATED	coord: 1..84 score: 3.3
None	No IPR available	PANTHER	PTHR13889:SF8	PRP19/PSO4 HOMOLOG (NUCLEAR MATRIX PROTEIN 200)	coord: 1..84 score: 3.3

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY475550 ID=DY475550; Name=DY475550; organism=Cicer arietinum; type=EST; length=255bp
TCTTATTCTTGGAACTGGCACAACAGATTCTCTTGTTAAGATCTGGGANG
TAAAAAGTCAGGCAAATGTTGCTAAGTTTGATGGACATGTGGGGCATGTA
ACTGCCGTTTCCTTTTCTGAGAATGGATACTACCTTGCGACTGCAGCACA
TGATGGTGTAAAGCTTTGGGATCTACGGAAGTTGAAAAACTTCAGGAATT
TTGCCCCATATGACTCAGAAACTCCAACAAGCTCTGTGGAGTTTGACCAC
AGTGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_rpt
IPR011046	WD40 repeat-like-containing domain
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019781	WD40 repeat, subgroup
IPR019782	WD40 repeat 2

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