GR395296
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR395296 vs. SwissProt
Match: NSE1_DANRE (Non-structural maintenance of chromosomes element 1 homolog OS=Danio rerio GN=nsmce1 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.764e-9 Identity = 30/124 (24.19%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 129 KNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLS---NDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAE-DDNEPRQSQ 488 K + E L++ V+D WL DG L V+ ++ + + + + C+VC+ ++ ++C N +C +++H C+ + +F+ ++ CP+C WP +P+ + Q++ N P S+ Sbjct: 104 KKLKKKEAELVLNKFVQDKWLKEQ-DGEYTLSVRCIVEMEPYMRTIYQDMIKVCYVCHNIALQCQVCENPSCEIKVHLPCVAR-YFRARSDPHCPACNDFWPHEIPEMQAAQSQSSQNLPSSSK 225
BLAST of GR395296 vs. SwissProt
Match: NSE1_XENTR (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis GN=nsmce1 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.991e-8 Identity = 40/138 (28.99%), Postives = 66/138 (47.83%), Query Frame = -2 Query: 84 KNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSN--DVPS-CHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQRAFRFKGKKQRANTI 488 K + E+ L V+D WL +G L + ++ + L+ DV C+VC++ I+ +LC +NC + +H C ++F+ A +CP+C SWP +P L P SQ A +G+ QR+ I Sbjct: 133 KKMKKKEVEQLLQSFVQDKWLIGR-NGEYTLHTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLC--ENCGIPLHLQCAG-IYFRGIANPLCPNCKESWPHEIPD---LSQVSSQGPSHSQAA-PVRGRNQRSRNI 262
BLAST of GR395296 vs. SwissProt
Match: NSE1_XENLA (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis GN=nsmce1 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.981e-7 Identity = 51/198 (25.76%), Postives = 81/198 (40.91%), Query Frame = -2 Query: 93 AGDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSN--DVPS-CHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQRAFRFKGKKQRA 677 A D + F K + I+ D NG +SI LNL + Q K + E+ L V++ WL +G L + ++ + + DV C+VC + I+++LC +NC + +H C + +F KA CP+C SWP +P L P SQ +G+ QR+ Sbjct: 92 ASDYAENELELFRKTMELIILSD---NGFATSISILNLADELQS-------------------KKMKKKEVEQLLQSFVQEKWLIGR-NGEYTLHTRCIMELEHYIRNTYQDVAKICNVCRKVAIQSQLC--ENCGIPLHLQCAGK-YFHGKANPTCPNCNESWPHEIPD---LNQVSSQGPSHSQTE-TVRGRNQRS 259
BLAST of GR395296 vs. TrEMBL
Match: B4FXP9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 3.452e-54 Identity = 103/204 (50.49%), Postives = 135/204 (66.18%), Query Frame = -2 Query: 51 FYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQRA------FRFKGKKQRANTIVEDEEVGCSNQ 644 FYK ++EAIVQ+A +G +SIDALN+ LD+QV ++ GS Q+ R+P ++KNF +SQKEKTL EL+RD WL T G + LG +SFLD RSWF ND+PSC VCNEA IKA CPN+ C VRIH YCLK+ F QRKA++ CPSCGT WP + E A++ NEP + A R K + +A + E++ G S + Sbjct: 102 FYKGLLEAIVQEAGNDGSITSIDALNVRLDNQVAVLDGS--QDSQSRLPSSIKNFSMSQKEKTLDELIRDRWLSYTATGKIGLGTRSFLDLRSWFRGNDIPSCVVCNEACIKASSCPNEGCDVRIHEYCLKKKFSQRKASRACPSCGTGWPCQDGEGE---ADEVNEPGEEDLASPANHPSRKKRSRVKAELVEENDIAGPSTE 300 HSP 2 Score: 33.4982 bits (75), Expect = 3.452e-54 Identity = 15/28 (53.57%), Postives = 22/28 (78.57%), Query Frame = -3 Query: 623 VNTVSDDKSKLGTKYTVRXIASIRPLLK 706 VN ++D++SKLGTKY+V IA + LL+ Sbjct: 81 VNNIADEESKLGTKYSVPQIAFYKGLLE 108
BLAST of GR395296 vs. TrEMBL
Match: B4G1F9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 3.453e-54 Identity = 103/204 (50.49%), Postives = 135/204 (66.18%), Query Frame = -2 Query: 51 FYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQRA------FRFKGKKQRANTIVEDEEVGCSNQ 644 FYK ++EAIVQ+A +G +SIDALN+ LD+QV ++ GS Q+ R+P ++KNF +SQKEKTL EL+RD WL T G + LG +SFLD RSWF ND+PSC VCNEA IKA CPN+ C VRIH YCLK+ F QRKA++ CPSCGT WP + E A++ NEP + A R K + +A + E++ G S + Sbjct: 100 FYKGLLEAIVQEAGNDGSITSIDALNVRLDNQVAVLDGS--QDSQSRLPSSIKNFSMSQKEKTLDELIRDRWLSYTATGKIGLGTRSFLDLRSWFRGNDIPSCVVCNEACIKASSCPNEGCDVRIHEYCLKKKFSQRKASRACPSCGTGWPCQDGEGE---ADEVNEPGEEDLASPANHPSRKKRSRVKAELVEENDIAGPSTE 298 HSP 2 Score: 33.4982 bits (75), Expect = 3.453e-54 Identity = 15/28 (53.57%), Postives = 22/28 (78.57%), Query Frame = -3 Query: 623 VNTVSDDKSKLGTKYTVRXIASIRPLLK 706 VN ++D++SKLGTKY+V IA + LL+ Sbjct: 79 VNNIADEESKLGTKYSVPQIAFYKGLLE 106
BLAST of GR395296 vs. TrEMBL
Match: C5YQP4_SORBI (Putative uncharacterized protein Sb08g001620 OS=Sorghum bicolor GN=Sb08g001620 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.209e-53 Identity = 104/201 (51.74%), Postives = 134/201 (66.67%), Query Frame = -2 Query: 57 FYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQ-----RAFRFKGKKQRANTIVEDEEVGCS 644 FYK ++EAIVQ+A +G +SIDALN+ L++Q+ IV GSE + RVP ++KNF LSQKE TL EL+RD WL T+ G + LG +SFLD RSWF ND+PSC VCNEA IKA C N+ C VRIH YCLK+ F QRKA++ C SCGT WP +A+ +D NEP + Q R+ R K K+ +A + E+ G S Sbjct: 100 FYKGLLEAIVQEAGTDGSITSIDALNVRLENQIVIVDGSEDSQS--RVPSSIKNFSLSQKENTLDELIRDRWLSYTSTGKIGLGTRSFLDLRSWFRGNDIPSCVVCNEACIKASSCLNEGCNVRIHEYCLKKKFSQRKASRACSSCGTEWPCQDGEAD--GDDDVNEPGEDQVSSANRSSRKKRKRVKAELVEENNNAGPS 296 HSP 2 Score: 32.3426 bits (72), Expect = 2.209e-53 Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = -3 Query: 623 VNTVSDDKSKLGTKYTVRXIASIRPLLK 706 VN + D++SKLGTKY+V IA + LL+ Sbjct: 79 VNNIVDEESKLGTKYSVPQIAFYKGLLE 106
BLAST of GR395296 vs. TrEMBL
Match: D7T1H8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037451001 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.660e-52 Identity = 110/189 (58.20%), Postives = 126/189 (66.67%), Query Frame = -2 Query: 126 QIQAGDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQA--EDDNEPRQSQR 686 Q + G K FYK IIEAIVQD TA G S IDALN+ L++QV T S SQ VP A KNF +SQKEKTL ELV+D WL ST DG +RLGV+SFLD RSWF +NDVPSC VCNEAG+KAELC N+ C+VRIH YCLK+ F QR+ +VCP CGT W A A E+D R SQR Sbjct: 86 QSKLGTKYTVPQLAFYKGIIEAIVQDVTAQGSISDIDALNIRLENQVLTGT-SHSQGIPPNVPAAFKNFSISQKEKTLDELVQDQWLSSTPDGKIRLGVRSFLDLRSWFHNNDVPSCDVCNEAGVKAELCRNEGCMVRIHLYCLKKKFSQRRVERVCPGCGTQW----QNASITDAIEEEDEPSRPSQR 269
BLAST of GR395296 vs. TrEMBL
Match: B9S6N4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1111390 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.331e-48 Identity = 106/214 (49.53%), Postives = 133/214 (62.15%), Query Frame = -2 Query: 51 QIQAGDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAE-DDNEPRQSQRAFRFKGKKQRANTIVE-DEEVGCSNQ 686 Q + G K +KA IEAIVQDATA G S ALN+ L++QV S+SQ S +VP AL+NF LSQKEKTL ELV D WL T DG + LGV+S+LD RSWF ++ P C VCNEA IKA++C N++C +RIH YCLK+ Q + VCP+CG W VPK E + E + N+P +SQ K KK +AN E D G S+Q Sbjct: 86 QSKLGSKYSVPQITLFKAAIEAIVQDATAQGSISWSGALNIRLENQVYNSAESQSQGSSSQVPPALRNFSLSQKEKTLDELVCDKWLCRTPDGGIGLGVRSYLDLRSWFHNSGTPPCQVCNEAAIKAKVCQNESCTLRIHHYCLKKKISQSRGKIVCPTCGIEWECQVPKCEAVDVEYEQNDPTESQPPVGSKRKKLKANINAEADAARGSSSQ 299
BLAST of GR395296 vs. TrEMBL
Match: C5Y3Z2_SORBI (Putative uncharacterized protein Sb05g001830 OS=Sorghum bicolor GN=Sb05g001830 PE=4 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 5.683e-48 Identity = 88/183 (48.09%), Postives = 121/183 (66.12%), Query Frame = -2 Query: 96 FYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQRAFRFKGKKQR 644 +YK ++EA +Q+A +G +SIDAL++ LD+QV I+ G S + R+P + +F LSQKEKT+ ELV D WL T+ G + LG++SFLD R WF +ND+P C VCNEA IKA CPN+ C +RIH YCLK+ F QRKA++ CP CGT WP + E +D NEP + A + ++R Sbjct: 100 YYKGLLEAFIQEAGNDGSITSIDALHVRLDNQVIILDGG-SHDSQSRLPSCITDFKLSQKEKTIDELVWDRWLSYTSTGKIGLGIRSFLDLRGWFRANDIPLCVVCNEACIKATSCPNEGCNIRIHEYCLKKKFSQRKASRACPGCGTEWP--RQEGEVDGDDDANEPGEDGTASEDRSSRKR 279 HSP 2 Score: 33.4982 bits (75), Expect = 5.683e-48 Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = -3 Query: 623 VNTVSDDKSKLGTKYTVRXIASIRPLLK 706 VN + DD+SKLGTKY+V +A + LL+ Sbjct: 79 VNNIVDDESKLGTKYSVPQVAYYKGLLE 106
BLAST of GR395296 vs. TrEMBL
Match: A5AZQ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030825 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.925e-46 Identity = 103/198 (52.02%), Postives = 121/198 (61.11%), Query Frame = -2 Query: 126 IIEAIVQDATANGLFSSIDALNLNLDSQVT--------------------------IVTG-SESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQA--EDDNEPRQSQR 632 +IEAIVQD TA G S IDALN+ L++Q ++TG S SQ VP A KNF +SQKEKTL ELV+D WL ST DG +RLGV+SFLD RSWF +NDVPSC VCNEAG+KAELC N+ C+VRIH YCLK+ F QR+ +VCP CGT W A A E+D R SQR Sbjct: 247 VIEAIVQDVTAQGSISDIDALNIRLENQYCNDIESRNCQLHIYLGLQGGIWFAVGHVLTGTSHSQGIPPNVPAAFKNFSISQKEKTLDELVQDQWLSSTPDGKIRLGVRSFLDLRSWFHNNDVPSCDVCNEAGVKAELCRNEGCMVRIHLYCLKKKFSQRRVERVCPGCGTQW----QNASITDAIEEEDEPSRPSQR 440
BLAST of GR395296 vs. TrEMBL
Match: Q2RB11_ORYSJ (Nse1 non-SMC component of SMC5-6 complex family protein, expressed OS=Oryza sativa subsp. japonica GN=Os11g0130300 PE=4 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.990e-46 Identity = 96/211 (45.50%), Postives = 132/211 (62.56%), Query Frame = -2 Query: 57 GDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQ-----RAFRFKGKKQRANTIVEDEEVGCS 674 G K FYK ++EAIV +A +G ++IDALN +++QV I S+ + R+P ++ NF LSQKEKTL+EL++D WL T G + LG++SFLD RSW SND+PSC VCNEA IKA CPN+ C VRIH YCLK+ F QRKA++ C CGT WP + + + ED NEP + Q + R + + ++ + E+E G S Sbjct: 91 GSKFSVPQIAFYKGLLEAIVHEAGNDGSITNIDALNTRIENQVVIADASQGSQS--RLPTSITNFSLSQKEKTLNELIQDRWLSYTPTGKIGLGIRSFLDLRSWLRSNDIPSCEVCNEACIKASCCPNEECNVRIHGYCLKKKFSQRKASRAC-GCGTEWPRLEGEDDGAEDEDVNEPEEDQVPSANQHSRTRRRGVKSELVEENERAGPS 298
BLAST of GR395296 vs. TrEMBL
Match: Q84VP9_ARATH (At5g21140 OS=Arabidopsis thaliana GN=At5g21140 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.517e-46 Identity = 97/198 (48.99%), Postives = 125/198 (63.13%), Query Frame = -2 Query: 96 QIQAGDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFT-VPKAEFLQAEDDNEPRQSQRAFRFKGKKQR 686 Q + G K F+K IIEAI QD A G SS DALN+ L++Q++ SE+ Q+VP A KNF ++QKEKTL ELVRD WL T + N+ LG++S LD RSWF +NDVPSC VCNEAG+KA+LCP + C VRIH YCLK+L QR K C CG WP + + K E + ++E +A K K++R Sbjct: 86 QSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISSFDALNIRLENQIS----SEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGIRSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRD-DKRCSGCGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRR 278
BLAST of GR395296 vs. TrEMBL
Match: B8BIV3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34953 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.896e-45 Identity = 95/211 (45.02%), Postives = 132/211 (62.56%), Query Frame = -2 Query: 57 GDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFTVPKAEFLQAEDDNEPRQSQ-----RAFRFKGKKQRANTIVEDEEVGCS 674 G K F+K ++EAIV +A +G ++IDALN +++QV I S+ + R+P ++ NF LSQKEKTL+EL++D WL T G + LG++SFLD RSW SND+PSC VCNEA IKA CPN+ C VRIH YCLK+ F QRKA++ C CGT WP + + + ED NEP + Q + R + + ++ + E+E G S Sbjct: 91 GSKFSVPQIAFHKGLLEAIVHEAGNDGSITNIDALNTRIENQVVIADASQGSQS--RLPTSITNFSLSQKEKTLNELIQDRWLSYTPTGKIGLGIRSFLDLRSWLRSNDIPSCEVCNEACIKASCCPNEECNVRIHGYCLKKKFSQRKASRAC-GCGTEWPRLEGEDDGAEDEDVNEPEEDQVPSANQHSRTRRRGVKSELVEENERAGPS 298
BLAST of GR395296 vs. TAIR peptide
Match: AT5G21140.1 (| Symbols: emb1379 | embryo defective 1379 | chr5:7187416-7189521 REVERSE LENGTH=312) HSP 1 Score: 187.963 bits (476), Expect = 4.430e-48 Identity = 97/198 (48.99%), Postives = 125/198 (63.13%), Query Frame = -2 Query: 96 QIQAGDKVYSSXNCFYKAIIEAIVQDATANGLFSSIDALNLNLDSQVTIVTGSESQEESQRVPYALKNFGLSQKEKTLSELVRDLWLDSTTDGNVRLGVKSFLDFRSWFLSNDVPSCHVCNEAGIKAELCPNQNCIVRIHSYCLKQLFFQRKAAKVCPSCGTSWPFT-VPKAEFLQAEDDNEPRQSQRAFRFKGKKQR 686 Q + G K F+K IIEAI QD A G SS DALN+ L++Q++ SE+ Q+VP A KNF ++QKEKTL ELVRD WL T + N+ LG++S LD RSWF +NDVPSC VCNEAG+KA+LCP + C VRIH YCLK+L QR K C CG WP + + K E + ++E +A K K++R Sbjct: 86 QSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISSFDALNIRLENQIS----SEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGIRSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRD-DKRCSGCGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRR 278 The following BLAST results are available for this feature:
BLAST of GR395296 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 3
BLAST of GR395296 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR395296 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR395296 ID=GR395296; Name=GR395296; organism=Cicer arietinum; type=EST; length=708bpback to top |