GR397175

EST Overview
NameGR397175
Unique NameGR397175
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length438
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR397175 vs. TrEMBL
Match: B9S8R2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0603700 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.608e-14
Identity = 51/110 (46.36%), Postives = 59/110 (53.64%), Query Frame = -2
Query:  129 AFTALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFEAAERGLE-------TAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 437
            A  ALT RE+   A+DIPLFG+RK L        E+V EGFE AE+GLE       TAEKGIE AEK+I                          T+VVNGILGPEAQ+S
Sbjct:   48 AAPALTVRETASKAEDIPLFGLRKKLKKAEEEAEELVREGFETAEKGLETAEKGIETAEKGIEAAEKEIEEAVSFGALAQAGAVAGAEIFGVLVATSVVNGILGPEAQRS 157          
BLAST of GR397175 vs. TrEMBL
Match: Q8LDK6_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.019e-14
Identity = 51/110 (46.36%), Postives = 60/110 (54.55%), Query Frame = -2
Query:  129 AFTALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFE-------AAERGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 437
            A T +T  +S  MA++IPLFGIRK L        EIV EGFE       AAE+GLE AE+G+ETAEK+I                          T+VVNGILGPEAQKS
Sbjct:   58 AATVVTGLQSASMAENIPLFGIRKKLKKAEEEAVEIVKEGFETAEKGVDAAEKGLEAAERGVETAEKEIVTAVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQKS 167          
BLAST of GR397175 vs. TrEMBL
Match: D7LG12_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481233 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.751e-13
Identity = 50/110 (45.45%), Postives = 59/110 (53.64%), Query Frame = -2
Query:  129 AFTALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFE-------AAERGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 437
            A T +T  +S  MA++IP FGIRK L        EIV EGFE       AAERGLE AE+G+E+AEK+I                          T+VVNGILGPEAQKS
Sbjct:   58 AATVMTGLQSASMAENIPFFGIRKKLNKAEEEAVEIVKEGFETAEKGVDAAERGLEAAERGVESAEKEIVTAVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQKS 167          
BLAST of GR397175 vs. TrEMBL
Match: A5BVF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027633 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.751e-13
Identity = 51/108 (47.22%), Postives = 58/108 (53.70%), Query Frame = -2
Query:  129 TALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFEA-------AERGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 431
            TALTARE    A+DIPLFG+RK L        EI+ EG EA       AE+G+E AEKGIETAEK+I                          T+VVN ILGPEAQKS
Sbjct:   45 TALTARELPSRAQDIPLFGLRKKLEKVEEEAEEILKEGIEAAEKGIVTAEKGIEKAEKGIETAEKEIETAVSYNGLTQAGAVAGAEVVGVLVATSVVNAILGPEAQKS 152          
BLAST of GR397175 vs. TrEMBL
Match: O64835_ARATH (At2g23670/F26B6.32 OS=Arabidopsis thaliana GN=At2g23670 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.287e-13
Identity = 50/110 (45.45%), Postives = 59/110 (53.64%), Query Frame = -2
Query:  129 AFTALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFE-------AAERGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 437
            A T +T  +   MA++IPLFGIRK L        EIV EGFE       AAE+GLE AE+G+ETAEK+I                          T+VVNGILGPEAQKS
Sbjct:   58 AATVVTGLQPASMAENIPLFGIRKKLKKAEEEAVEIVKEGFETAEKGVDAAEKGLEAAERGVETAEKEIVTAVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQKS 167          
BLAST of GR397175 vs. TrEMBL
Match: B9HEH0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_563064 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.228e-11
Identity = 47/114 (41.23%), Postives = 54/114 (47.37%), Query Frame = -2
Query:  129 ALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFEAAE--------------RGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 428
            AL  RE   +A+DIPLFG+RK L        E+V EGFE AE              RG+ETAEK I TAEK+I                          TA+VNGILGPE  KS
Sbjct:   54 ALALREPSSLAQDIPLFGLRKKLKRAEEEAEELVKEGFETAEKGLETAGKGIVTVERGIETAEKEIVTAEKEIEEAVSFGGLAQAGAVAGAEVVGVLVATAIVNGILGPEGSKS 167          
BLAST of GR397175 vs. TrEMBL
Match: A9PJ02_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.228e-11
Identity = 47/114 (41.23%), Postives = 54/114 (47.37%), Query Frame = -2
Query:  129 ALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFEAAE--------------RGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 428
            AL  RE   +A+DIPLFG+RK L        E+V EGFE AE              RG+ETAEK I TAEK+I                          TA+VNGILGPE  KS
Sbjct:   54 ALALREPSSLAQDIPLFGLRKKLKRAEEEAEELVKEGFETAEKGLETAGKGIVTVERGIETAEKEIVTAEKEIEEAVSFGGLAQAGAVAGAEAVGVLVATAIVNGILGPEGSKS 167          
BLAST of GR397175 vs. TAIR peptide
Match: AT2G23670.1 (| Symbols: YCF37 | homolog of Synechocystis YCF37 | chr2:10063307-10063810 REVERSE LENGTH=167)

HSP 1 Score: 78.5666 bits (192), Expect = 1.510e-15
Identity = 50/110 (45.45%), Postives = 59/110 (53.64%), Query Frame = -2
Query:  129 AFTALTARESVFMAKDIPLFGIRKSLXXXXXXXXEIVSEGFE-------AAERGLETAEKGIETAEKDISXXXXXXXXXXXXXXXXXXXXXXXXGTAVVNGILGPEAQKS 437
            A T +T  +   MA++IPLFGIRK L        EIV EGFE       AAE+GLE AE+G+ETAEK+I                          T+VVNGILGPEAQKS
Sbjct:   58 AATVVTGLQPASMAENIPLFGIRKKLKKAEEEAVEIVKEGFETAEKGVDAAEKGLEAAERGVETAEKEIVTAVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQKS 167          
The following BLAST results are available for this feature:
BLAST of GR397175 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9S8R2_RICCO4.608e-1446.36Putative uncharacterized protein OS=Ricinus commun... [more]
Q8LDK6_ARATH6.019e-1446.36Putative uncharacterized protein OS=Arabidopsis th... [more]
D7LG12_ARALY1.751e-1345.45Putative uncharacterized protein OS=Arabidopsis ly... [more]
A5BVF7_VITVI1.751e-1347.22Putative uncharacterized protein OS=Vitis vinifera... [more]
O64835_ARATH2.287e-1345.45At2g23670/F26B6.32 OS=Arabidopsis thaliana GN=At2g... [more]
B9HEH0_POPTR6.228e-1141.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PJ02_9ROSI6.228e-1141.23Putative uncharacterized protein OS=Populus tricho... [more]
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BLAST of GR397175 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G23670.11.510e-1545.45| Symbols: YCF37 | homolog of Synechocystis YCF37 ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..36
score: NAcoord: 66..74
score
NoneNo IPR availableSEGsegsegcoord: 86..103
score: NAcoord: 109..123
score
NoneNo IPR availableSEGsegsegcoord: 3..16
score
NoneNo IPR availableSEGsegsegcoord: 6..28
score
NoneNo IPR availableSEGsegsegcoord: 27..35
score: NAcoord: 64..88
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR397175 ID=GR397175; Name=GR397175; organism=Cicer arietinum; type=EST; length=438bp
CAACCACAAAATACTTTGGTATAAAAAATTTAAAAATAAACACAAAATGC
AGGCACATTCTTATAATTACAGAGTTATTACATTATTAAAATTGAATTGT
AGTGATAATATTCACGACTCACGAGTCATGACTTTTGAGCCTCAGGCCCC
AAAATACCGTTCACCACCGCCGTACCAACCAAAACACCGAAAACCTCACC
TCCCGCAACCACACCGGCCTGTGCCAAACCTCCAAAACCCACCGCAAATG
ATATATCCTTCTCAGCCGTCTCAATTCCCTTTTCCGCCGTCTCCAGTCCC
CGCTCCGCCGCTTCAAATCCTTCACTCACAATCTCTTCAGCCTTTTCCTC
CGCTTTCTTCAAACTCTTCCGTATCCCAAACAAAGGTATATCCTTCGCCA
TAAACACCGATTCCCTAGCTGTCAAAGCCGTAAACGCC
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