GR399072

EST Overview


Name	GR399072
Unique Name	GR399072
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	498

Libraries


Library Name	Type
LIBEST_024782 ICC4958 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR399072 vs. TrEMBL
Match: C6TJ42_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.293e-12
Identity = 45/91 (49.45%), Postives = 50/91 (54.95%), Query Frame = 2

Query:    5 VPGMYLPQQVTAPESTLTKEPDEIEQHERDPPAVGSGKHV--XXXXXXXXXXXXXXXXXXXXXXXXDHHSSSTARHPRKPV-QQWVRRDNP 268
            +PGMYLPQ V  P ST TKE DE +Q  +DPPAV   KH                           D+HSSSTAR+PRKP  QQWVRRDNP
Sbjct:  274 LPGMYLPQPVAMPSSTPTKESDEPQQ--KDPPAVVPEKHAGGTSNSSIPSSSRQRNFGARRQKARSDNHSSSTARNPRKPAQQQWVRRDNP 362

The following BLAST results are available for this feature:

BLAST of GR399072 vs. TrEMBL

BLAST of GR399072 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
C6TJ42_SOYBN	4.293e-12	49.45	Putative uncharacterized protein OS=Glycine max PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 42..65 score
None	No IPR available	SEG	seg	seg	coord: 2..18 score: NAcoord: 34..47 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR399072 ID=GR399072; Name=GR399072; organism=Cicer arietinum; type=EST; length=498bp
GCGGGTGCCCGGTATGTATCTTCCTCAACAAGTTACCGCGCCAGAGTCCA
CGTTGACCAAGGAACCCGACGAGATTGAGCAACACGAAAGAGATCCACCT
GCAGTCGGGTCAGGAAAACATGTCAGCGGGACCTCAAATGGGTCTAGTTC
TAGTGGGAACAGGAATTTCGGTGCGAGGAGGAATAGAGGACGGAGTGATC
ATCACTCCAGTTCGACTGCAAGACATCCAAGAAAACCCGTCCAACAGTGG
GTTAGAAGAGATAATCCTTAACAATAAGCAATAGAAGTGATATAATATCT
TTCACTTCTATTTATCATATTGCAAATACGAAAATCAGATTGAACCCATA
TTACTGGGACAAAAAACACTATCGACCCTAATATATATTATATGAATGTT
TAGATTGCAAAGAAATGTATCAGAAGATTAGGAAAAGACAGGTAGAGGAG
AGGTAGGTATTTTTTATTTGGAGGAATAGAAAGAAGCAAAATAAGGAT

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