GR402958

EST Overview


Name	GR402958
Unique Name	GR402958
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	337

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR402958 vs. SwissProt
Match: RH21_ARATH (DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana GN=RH21 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 8.818e-52
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKKN D +AKNLDK GYRVTTLHGGKSQEQREISLEGFR KRYNVLVATDV GRGIDIPDVAHVIN+DMP +IEM+THRIGRTGRAGK+GVAT+FLTL DT+VFYDLKQMLV
Sbjct:  585 TKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLV 696

[Close]

BLAST of GR402958 vs. SwissProt
Match: RH21_ORYSJ (DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica GN=Os03g0708600 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.611e-45
Identity = 85/112 (75.89%), Postives = 103/112 (91.96%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK+AD  AK+LDK G+RVTTLHGGKSQEQRE SL+GFR +R+ VLVATDVAGRGIDIPDVAHVIN++MP +I+ +THRIGRTGRAGK G+AT+FLTL++TD+F+DLKQML+
Sbjct:  587 TKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDLKQMLI 698

[Close]

BLAST of GR402958 vs. SwissProt
Match: RH44_ARATH (Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis thaliana GN=RH44 PE=5 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 5.019e-39
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGY-RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            T+   DY+ KNL+K G  RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VIN+DMP  ++++THRIGRTGRAGKTGVATTFLTL+D DVFY LKQ L
Sbjct:  480 TRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKL 591

[Close]

BLAST of GR402958 vs. SwissProt
Match: PRP28_COCIM (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides immitis GN=PRP28 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.847e-33
Identity = 69/111 (62.16%), Postives = 86/111 (77.48%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            K+N D VA+++ + GY   TLHG K+QEQRE +L   R    +VLVATD+AGRGID+PDV+ V+NF+M  NIE +THRIGRTGRAGK+GVA TFL  +D DV YDLKQML+
Sbjct:  662 KRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLM 772

[Close]

BLAST of GR402958 vs. SwissProt
Match: PRP28_CHAGB (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium globosum GN=PRP28 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.412e-33
Identity = 67/110 (60.91%), Postives = 86/110 (78.18%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            K+N + VAK++   GY   TLHG K+QEQRE SL   R  + N+LVATD+AGRGID+ DV+ V+NF+MP +IE +THRIGRTGRAGK+GVA TFL  +D+DV YDLKQ++
Sbjct:  552 KRNCEMVAKDIKSWGYSTVTLHGSKTQEQREASLASVRNGQANILVATDLAGRGIDVADVSLVVNFNMPSSIEAYTHRIGRTGRAGKSGVAITFLGNEDSDVMYDLKQII 661

[Close]

BLAST of GR402958 vs. SwissProt
Match: DDX23_PONAB (Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.151e-33
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            KK  D +AK+L+K GY   TLHGGK QEQRE +L   +    ++LVATDVAGRGIDI DV+ V+N+DM  NIE + HRIGRTGRAGK+GVA TFLT +D+ VFY+LKQ ++
Sbjct:  674 KKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAIL 784

[Close]

BLAST of GR402958 vs. SwissProt
Match: DDX23_HUMAN (Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 3.151e-33
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            KK  D +AK+L+K GY   TLHGGK QEQRE +L   +    ++LVATDVAGRGIDI DV+ V+N+DM  NIE + HRIGRTGRAGK+GVA TFLT +D+ VFY+LKQ ++
Sbjct:  674 KKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAIL 784

[Close]

BLAST of GR402958 vs. SwissProt
Match: PRP28_SCLS1 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.019e-33
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            K+N D VA+++   G+   TLHG K+QEQRE +L   R+   NVLVATD+AGRGID+PDV+ V+NF+M  NIE +THRIGRTGRAGK+GVA TFL  +D D  YDLKQML+
Sbjct:  662 KRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADTMYDLKQMLM 772

[Close]

BLAST of GR402958 vs. SwissProt
Match: PRP28_BOTFB (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia fuckeliana (strain B05.10) GN=prp28 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.019e-33
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            K+N D VA+++   G+   TLHG K+QEQRE +L   R+   NVLVATD+AGRGID+PDV+ V+NF+M  NIE +THRIGRTGRAGK+GVA TFL  +D+D  YDLKQML
Sbjct:  663 KRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDSDTMYDLKQML 772

[Close]

BLAST of GR402958 vs. SwissProt
Match: PRP28_ASPOR (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus oryzae GN=prp28 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.564e-32
Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            K+N D +A+ + + G+   TLHG K+QEQRE +L   R  + +VLVATD+AGRGID+PDV+ VINF+M   IE +THRIGRTGRAGK+GVA TFL  +DTDV YDLKQM++
Sbjct:  652 KRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNEDTDVMYDLKQMIM 762

[Close]

BLAST of GR402958 vs. TrEMBL
Match: B9IED5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_775952 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.071e-54
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKKNAD VAKNLDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGKTGVA+TFLTL DTDVFYDLKQML+
Sbjct:  562 TKKNADMVAKNLDKHGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVASTFLTLGDTDVFYDLKQMLI 673

[Close]

BLAST of GR402958 vs. TrEMBL
Match: D7U5L3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024227001 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 8.700e-53
Identity = 102/112 (91.07%), Postives = 108/112 (96.43%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK+AD +AK LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGKTGVATTFLTL D+DVFYDLKQML+
Sbjct:  578 TKKSADNLAKGLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLI 689

[Close]

BLAST of GR402958 vs. TrEMBL
Match: B9I2D6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569725 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 8.700e-53
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKKNAD VAKNLDK G+RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGKTGVATTFLT  D+DVFYDLKQML+
Sbjct:  111 TKKNADMVAKNLDKLGFRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTHGDSDVFYDLKQMLI 222

[Close]

BLAST of GR402958 vs. TrEMBL
Match: B9S714_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1331440 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.484e-52
Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKKNAD VAKNLDK  YRVTTLHGGKSQEQREISLEGFRTK+Y VLVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGK+GVATTFLTL DTDVFYDLKQMLV
Sbjct:  566 TKKNADTVAKNLDKAKYRVTTLHGGKSQEQREISLEGFRTKKYTVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKSGVATTFLTLHDTDVFYDLKQMLV 677

[Close]

BLAST of GR402958 vs. TrEMBL
Match: D7SRS0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029438001 PE=4 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.531e-52
Identity = 101/112 (90.18%), Postives = 107/112 (95.54%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK+ D +AK LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGKTGVATTFLTL D+DVFYDLKQML+
Sbjct:  482 TKKSTDTLAKGLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLI 593

[Close]

BLAST of GR402958 vs. TrEMBL
Match: A5BA90_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005473 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.531e-52
Identity = 101/112 (90.18%), Postives = 107/112 (95.54%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK+ D +AK LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGKTGVATTFLTL D+DVFYDLKQML+
Sbjct:  513 TKKSTDTLAKGLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLI 624

[Close]

BLAST of GR402958 vs. TrEMBL
Match: D7LGD3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902447 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.814e-50
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKKN D +AKNLDK GYRVTTLHGGKSQEQREISLEGFR KRYNVLVATDV GRGIDIPDVAHVIN+DMP +IEM+THRIGRTGRAGK+GVAT+FLTL DT+VFYDLKQMLV
Sbjct:  583 TKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLV 694

[Close]

BLAST of GR402958 vs. TrEMBL
Match: A9SGH2_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212087 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.094e-50
Identity = 95/112 (84.82%), Postives = 106/112 (94.64%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK+AD +++ LDK GYRVTTLHGGK+QEQRE+SL+GFR KR+N LVATDVAGRGIDIPDVAHVIN+DMPGNIEM+THRIGRTGRAGKTG+ATTFLTL DTDVFYDLKQMLV
Sbjct:  386 TKKSADTLSRQLDKNGYRVTTLHGGKTQEQREVSLDGFRNKRFNCLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGIATTFLTLHDTDVFYDLKQMLV 497

[Close]

BLAST of GR402958 vs. TrEMBL
Match: D5A7Y4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.042e-50
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK AD +A++LDK GYRVTTLHGGK+QEQREISLEGFR KRYN+LVATDVAGRGIDIPDVAHVINFDMP NIEM+THRIGRTGRAGKTGVATTFLT  D+DVFYDLKQML+
Sbjct:  111 TKKTADSLARHLDKVGYRVTTLHGGKTQEQREISLEGFRNKRYNILVATDVAGRGIDIPDVAHVINFDMPSNIEMYTHRIGRTGRAGKTGVATTFLTHHDSDVFYDLKQMLI 222

[Close]

BLAST of GR402958 vs. TrEMBL
Match: B6UFH0_MAIZE (ATP-dependent RNA helicase DDX23 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.757e-45
Identity = 86/112 (76.79%), Postives = 104/112 (92.86%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKK AD  AK+LDK G+RVTTLHGGKSQ+QREISL+GFR +R+NVLVATDVAGRGIDIPDVAHVIN++MP +++ +THRIGRTGRAGK GVAT+FLTL++TD+F+DLKQML+
Sbjct:  609 TKKTADMRAKDLDKSGFRVTTLHGGKSQDQREISLDGFRNRRFNVLVATDVAGRGIDIPDVAHVINYEMPSSVDTYTHRIGRTGRAGKKGVATSFLTLENTDIFFDLKQMLI 720

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT2G33730.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:14265679-14267880 REVERSE LENGTH=733)

HSP 1 Score: 201.83 bits (512), Expect = 7.001e-53
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLV 336
            TKKN D +AKNLDK GYRVTTLHGGKSQEQREISLEGFR KRYNVLVATDV GRGIDIPDVAHVIN+DMP +IEM+THRIGRTGRAGK+GVAT+FLTL DT+VFYDLKQMLV
Sbjct:  585 TKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLV 696

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT1G28180.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:9843084-9845002 REVERSE LENGTH=614)

HSP 1 Score: 159.458 bits (402), Expect = 3.985e-40
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGY-RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            T+   DY+ KNL+K G  RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VIN+DMP  ++++THRIGRTGRAGKTGVATTFLTL+D DVFY LKQ L
Sbjct:  472 TRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKL 583

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT3G58570.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:21657099-21660352 FORWARD LENGTH=646)

HSP 1 Score: 118.627 bits (296), Expect = 7.795e-28
Identity = 56/111 (50.45%), Postives = 79/111 (71.17%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            TKK AD +   L   G+  TT+HG +SQ++RE++L  F+T R  +LVATDVA RG+DIP VAHV+NFD+P +I+ + HRIGRTGRAG +G+AT F    +T +   L +++
Sbjct:  414 TKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELM 524

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT4G33370.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr4:16069669-16071405 REVERSE LENGTH=542)

HSP 1 Score: 115.546 bits (288), Expect = 6.599e-27
Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDV-FYDLKQML 333
            K + D + + L  +G     +HGGK QE R+ ++  F+  + +VLVATDVA +G+D PD+ HVIN+DMPG IE + HRIGRTGR GKTG+ATTF+    +++   DLK +L
Sbjct:  358 KADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLL 468

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT2G42520.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17705382-17708744 FORWARD LENGTH=633)

HSP 1 Score: 115.161 bits (287), Expect = 8.618e-27
Identity = 53/111 (47.75%), Postives = 81/111 (72.97%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            TK+ AD +   L   G+  T++HG ++Q++RE++L+ F++ R  +LVATDVA RG+DIP VAHV+NFD+P +I+ + HRIGRTGRAGK+G+AT F    +T +   L +++
Sbjct:  427 TKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELM 537

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT5G51280.1 (| Symbols: | DEAD-box protein abstrakt, putative | chr5:20841456-20843645 FORWARD LENGTH=591)

HSP 1 Score: 114.775 bits (286), Expect = 1.126e-26
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 1

Query:    4 KKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTL-QDTDVFYDLKQML 333
            K + D + + L  +G     +HGGK QE RE ++  F+  + +VLVATDVA +G+D PD+ HVIN+DMP  IE + HRIGRTGR GKTG+ATTF+   Q      DLK +L
Sbjct:  407 KADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLL 517

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT3G58510.3 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr3:21640608-21643464 FORWARD LENGTH=612)

HSP 1 Score: 114.39 bits (285), Expect = 1.470e-26
Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            TK+ AD +   L    +  T++HG ++Q++RE++L  F+T R  +LVATDVA RG+DIP VAHV+NFD+P +I+ + HRIGRTGRAGK+G+AT F    +  +   L +++
Sbjct:  417 TKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELM 527

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT3G58510.2 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr3:21640608-21643464 FORWARD LENGTH=612)

HSP 1 Score: 114.39 bits (285), Expect = 1.470e-26
Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            TK+ AD +   L    +  T++HG ++Q++RE++L  F+T R  +LVATDVA RG+DIP VAHV+NFD+P +I+ + HRIGRTGRAGK+G+AT F    +  +   L +++
Sbjct:  417 TKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELM 527

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT3G58510.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr3:21640608-21643464 FORWARD LENGTH=612)

HSP 1 Score: 114.39 bits (285), Expect = 1.470e-26
Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            TK+ AD +   L    +  T++HG ++Q++RE++L  F+T R  +LVATDVA RG+DIP VAHV+NFD+P +I+ + HRIGRTGRAGK+G+AT F    +  +   L +++
Sbjct:  417 TKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELM 527

[Close]

BLAST of GR402958 vs. TAIR peptide
Match: AT1G55150.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:20574634-20577141 FORWARD LENGTH=501)

HSP 1 Score: 104.375 bits (259), Expect = 1.521e-23
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1

Query:    1 TKKNADYVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINFDMPGNIEMHTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQML 333
            TKK  D + + L  +G+   ++HG KSQ +R+  L  FR+ +  ++ ATDVA RG+D+ DV +VIN+D PG++E + HRIGRTGRAG  G A TF T+ +     +L  +L
Sbjct:  353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNIL 463

The following BLAST results are available for this feature:

BLAST of GR402958 vs. SwissProt
BLAST of GR402958 vs. TrEMBL
BLAST of GR402958 vs. TAIR peptide

BLAST of GR402958 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RH21_ARATH	8.818e-52	87.50	DEAD-box ATP-dependent RNA helicase 21 OS=Arabidop...	[more]
RH21_ORYSJ	1.611e-45	75.89	DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sa...	[more]
RH44_ARATH	5.019e-39	69.64	Putative DEAD-box ATP-dependent RNA helicase 44 OS...	[more]
PRP28_COCIM	1.847e-33	62.16	Pre-mRNA-splicing ATP-dependent RNA helicase PRP28...	[more]
PRP28_CHAGB	2.412e-33	60.91	Pre-mRNA-splicing ATP-dependent RNA helicase PRP28...	[more]
DDX23_PONAB	3.151e-33	61.26	Probable ATP-dependent RNA helicase DDX23 OS=Pongo...	[more]
DDX23_HUMAN	3.151e-33	61.26	Probable ATP-dependent RNA helicase DDX23 OS=Homo ...	[more]
PRP28_SCLS1	7.019e-33	61.26	Pre-mRNA-splicing ATP-dependent RNA helicase prp28...	[more]
PRP28_BOTFB	7.019e-33	61.82	Pre-mRNA-splicing ATP-dependent RNA helicase prp28...	[more]
PRP28_ASPOR	1.564e-32	60.36	Pre-mRNA-splicing ATP-dependent RNA helicase prp28...	[more]

BLAST of GR402958 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9IED5_POPTR	2.071e-54	93.75	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7U5L3_VITVI	8.700e-53	91.07	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9I2D6_POPTR	8.700e-53	91.96	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S714_RICCO	1.484e-52	91.96	Dead box ATP-dependent RNA helicase, putative OS=R...	[more]
D7SRS0_VITVI	2.531e-52	90.18	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BA90_VITVI	2.531e-52	90.18	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7LGD3_ARALY	1.814e-50	87.50	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9SGH2_PHYPA	3.094e-50	84.82	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
D5A7Y4_PICSI	4.042e-50	86.61	Putative uncharacterized protein OS=Picea sitchens...	[more]
B6UFH0_MAIZE	1.757e-45	76.79	ATP-dependent RNA helicase DDX23 OS=Zea mays PE=2 ...	[more]

BLAST of GR402958 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G33730.1	7.001e-53	87.50	\| Symbols: \| P-loop containing nucleoside triphos...	[more]
AT1G28180.1	3.985e-40	69.64	\| Symbols: \| P-loop containing nucleoside triphos...	[more]
AT3G58570.1	7.795e-28	50.45	\| Symbols: \| P-loop containing nucleoside triphos...	[more]
AT4G33370.1	6.599e-27	48.65	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT2G42520.1	8.618e-27	47.75	\| Symbols: \| P-loop containing nucleoside triphos...	[more]
AT5G51280.1	1.126e-26	49.55	\| Symbols: \| DEAD-box protein abstrakt, putative ...	[more]
AT3G58510.3	1.470e-26	46.85	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT3G58510.2	1.470e-26	46.85	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT3G58510.1	1.470e-26	46.85	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT1G55150.1	1.521e-23	44.14	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 11..87 score: 1.5
IPR001650	Helicase, C-terminal	SMART	SM00490	no description	coord: 6..87 score: 5.6
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 1..112 score: 21
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 1..111 score: 1.6
None	No IPR available	PANTHER	PTHR10967	DEAD BOX ATP-DEPENDENT RNA HELICASE	coord: 1..110 score: 7.9
None	No IPR available	PANTHER	PTHR10967:SF47	DEAD (ASP-GLU-ALA-ASP) BOX POLYPEPTIDE 23	coord: 1..110 score: 7.9
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..112 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 82..95 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR402958 ID=GR402958; Name=GR402958; organism=Cicer arietinum; type=EST; length=337bp
ACCAAGAAGAATGCCGATTATGTTGCCAAGAATTTGGATAAGGAAGGCTA
TCGCGTGACCACTTTGCATGGAGGGAAATCTCAGGAACAGAGAGAGATTA
GTCTTGAAGGATTTAGGACCAAGAGATATAATGTGCTTGTTGCAACCGAT
GTTGCTGGACGTGGGATTGACATACCTGATGTGGCTCACGTTATCAACTT
TGATATGCCTGGGAATATTGAAATGCACACTCACCGTATTGGGCGAACTG
GCCGTGCAGGAAAGACAGGTGTAGCTACCACATTCCTAACTCTTCAGGAT
ACTGATGTCTTTTATGACCTCAAACAGATGCTGGTTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C

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