GR405946
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR405946 vs. SwissProt
Match: SNUT1_RAT (U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus GN=Sart1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.255e-24 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 6 KKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVK 320 ++ + G D ++ YK +++IE DE GR LTPKEAFR +SH+FHGKG GKMK E+RMK+ EE +K+M SSDTP +V ++E Q KTPY+VLSG K Sbjct: 693 RREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGK 797
BLAST of GR405946 vs. SwissProt
Match: SNUT1_MOUSE (U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus GN=Sart1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.255e-24 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 6 KKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVK 320 ++ + G D ++ YK +++IE DE GR LTPKEAFR +SH+FHGKG GKMK E+RMK+ EE +K+M SSDTP +V ++E Q KTPY+VLSG K Sbjct: 693 RREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGK 797
BLAST of GR405946 vs. SwissProt
Match: SNUT1_HUMAN (U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.255e-24 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 6 KKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVK 320 ++ + G D ++ YK +++IE DE GR LTPKEAFR +SH+FHGKG GKMK E+RMK+ EE +K+M SSDTP +V ++E Q KTPY+VLSG K Sbjct: 687 RREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGK 791
BLAST of GR405946 vs. SwissProt
Match: SNU66_SCHPO (U4/U6.U5 tri-snRNP-associated protein snu66 OS=Schizosaccharomyces pombe GN=snu66 PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 6.285e-8 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 3 Query: 57 YKKEIRIERTDEFGRILTPKEAFR-IISHKFHGKGPGKMKQEKRMKQFHEE 206 YK ++ I+ DEFG L PKEA++ ++SH+FHGKG GK K EKR+++ E+ Sbjct: 590 YKPQVDIKYVDEFGVELGPKEAYKYLLSHQFHGKGSGKAKTEKRLRRIVEK 640
BLAST of GR405946 vs. TrEMBL
Match: D7UD56_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_78.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035173001 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 4.924e-64 Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGI D+ G KEIRIERTDEFGRI+TPKEAFR+ISHKFHGKGPGKMKQEKRMKQ+ EELK+KQMK+SDTPS SVERMREAQAR+KTPYLVLSGHVKPGQTSDP+SGFATVEKD+PG LTPMLGDRKVEHFLG Sbjct: 790 KKKSKLVGIYDNTGT-----KEIRIERTDEFGRIMTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSQSVERMREAQARLKTPYLVLSGHVKPGQTSDPRSGFATVEKDVPGSLTPMLGDRKVEHFLG 926
BLAST of GR405946 vs. TrEMBL
Match: D7M881_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488536 PE=4 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.431e-64 Identity = 121/144 (84.03%), Postives = 137/144 (95.14%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEG-KEAQYK-KEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGIVDDEG KE++ + K+IRIERTDEFGR LTPKEAFR++SHKFHGKGPGKMK+EKRMKQ+ EELK+KQMK+SDTPS SV+RMREAQA++KTPYLVLSGHVKPGQTSDP+SGFATVEKD+PG LTPMLGD+KVEHFLG Sbjct: 650 KKKSKLVGIVDDEGGKESKDRFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPGQTSDPQSGFATVEKDVPGSLTPMLGDKKVEHFLG 793
BLAST of GR405946 vs. TrEMBL
Match: Q9LFE0_ARATH (Putative uncharacterized protein F5E19_120 OS=Arabidopsis thaliana GN=F5E19_120 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.097e-63 Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEG-KEAQYK------KEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGIVDD+G KE++ K K+IRIERTDEFGR LTPKEAFR++SHKFHGKGPGKMK+EKRMKQ+ EELK+KQMK+SDTPS SV+RMREAQA++KTPYLVLSGHVKPGQTSDP+SGFATVEKD+PG LTPMLGDRKVEHFLG Sbjct: 653 KKKSKLVGIVDDDGGKESKDKESKDRFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPGQTSDPQSGFATVEKDVPGSLTPMLGDRKVEHFLG 801
BLAST of GR405946 vs. TrEMBL
Match: B9DHM8_ARATH (AT5G16780 protein (Fragment) OS=Arabidopsis thaliana GN=AT5G16780 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.097e-63 Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEG-KEAQYK------KEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGIVDD+G KE++ K K+IRIERTDEFGR LTPKEAFR++SHKFHGKGPGKMK+EKRMKQ+ EELK+KQMK+SDTPS SV+RMREAQA++KTPYLVLSGHVKPGQTSDP+SGFATVEKD+PG LTPMLGDRKVEHFLG Sbjct: 632 KKKSKLVGIVDDDGGKESKDKESKDRFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPGQTSDPQSGFATVEKDVPGSLTPMLGDRKVEHFLG 780
BLAST of GR405946 vs. TrEMBL
Match: B9GK56_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640254 PE=4 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.433e-63 Identity = 122/144 (84.72%), Postives = 134/144 (93.06%), Query Frame = 3 Query: 3 KKKSKLVGIVDDE-GKEAQYK-KEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGIVDD+ G K K+IRIERTDEFGRI+TPKEAFR+ISHKFHGKGPGKMKQEKRMKQ+ EELK+KQMK+SDTPS+SVERMR AQA++KTPYLVLSGHVKPGQTSDP+SGFATVEKD PGGLTPMLGD+KVEHFLG Sbjct: 81 KKKSKLVGIVDDDVGTNNDNKFKDIRIERTDEFGRIMTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSLSVERMRGAQAQLKTPYLVLSGHVKPGQTSDPRSGFATVEKDFPGGLTPMLGDKKVEHFLG 224
BLAST of GR405946 vs. TrEMBL
Match: B9RRZ7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0800560 PE=4 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.341e-61 Identity = 117/142 (82.39%), Postives = 129/142 (90.85%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGIVD + ++K EIRIER DEFGRI+TPKEAFR+ISHKFHGKGPGKMKQEKRMKQ+ EELK+KQMK+SDTPS SVERMREAQ ++KTPYLVLSGHVK GQ SDP+S FATVEKDLPGGLTPMLGD+KVEHFLG Sbjct: 715 KKKSKLVGIVDSDADNEKFK-EIRIERMDEFGRIMTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSESVERMREAQKKLKTPYLVLSGHVKSGQASDPRSSFATVEKDLPGGLTPMLGDKKVEHFLG 855
BLAST of GR405946 vs. TrEMBL
Match: A9SNZ3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233757 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.538e-49 Identity = 98/155 (63.23%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLP-------------GGLTPMLGDRKVEHFLG 428 KKKSKL+GIVD E +++I ++R DEFGR +TPKEAFR +SHKFHGKGPGKMKQEKR KQ+ EELK+KQM + DTP M++E++REAQA++ PYLV+SGH+KPGQTSDP+SGFATVEK+ G LTPMLGD+KV HFLG Sbjct: 924 KKKSKLIGIVD-ESNNVVGQRDILLDRVDEFGRTMTPKEAFRKLSHKFHGKGPGKMKQEKRQKQYQEELKLKQMNAGDTPLMAMEKIREAQAKLHAPYLVISGHIKPGQTSDPRSGFATVEKEPVGSLTPMLGDNKNIGSLTPMLGDKKVAHFLG 1077
BLAST of GR405946 vs. TrEMBL
Match: C4JAG0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.474e-49 Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKL+G+ D K+IRIER DEFGR++TPKEAFR +SHKFHGKGPGKMKQEKR K++H+ELK K MKSSDTP ++ E+MREAQ+R +TPYL+LSG+ K GQTSD G+AT+E + PG LTPMLGD+KVEHFLG Sbjct: 104 KKKSKLIGVEDGP-------KDIRIERIDEFGRVMTPKEAFRHLSHKFHGKGPGKMKQEKRQKKYHDELKTKHMKSSDTPLLAAEKMREAQSRNQTPYLILSGNAKTGQTSD-SGGYATLETEQPGSLTPMLGDKKVEHFLG 237
BLAST of GR405946 vs. TrEMBL
Match: Q6K784_ORYSJ (IgE autoantigen-like OS=Oryza sativa subsp. japonica GN=OSJNBa0001A11.17 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.102e-47 Identity = 100/142 (70.42%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKL GI D K+IRIER DEFGR++TPKEAFR +SHKFHGK PGKMKQE+R K++ +ELK K+M SSDTP MS E+MREAQA KTPYLVLSG+ K GQTSD SGFATVEK+ PG LTPMLG +KVEHFLG Sbjct: 106 KKKSKLAGIEDGP-------KDIRIERIDEFGRVMTPKEAFRDLSHKFHGKAPGKMKQERRQKKYRDELKTKRMISSDTPLMSAEKMREAQALSKTPYLVLSGNAKSGQTSD-ASGFATVEKEHPGSLTPMLGAKKVEHFLG 239
BLAST of GR405946 vs. TrEMBL
Match: A3A7A3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06877 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.102e-47 Identity = 100/142 (70.42%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYKKEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKL GI D K+IRIER DEFGR++TPKEAFR +SHKFHGK PGKMKQE+R K++ +ELK K+M SSDTP MS E+MREAQA KTPYLVLSG+ K GQTSD SGFATVEK+ PG LTPMLG +KVEHFLG Sbjct: 651 KKKSKLAGIEDGP-------KDIRIERIDEFGRVMTPKEAFRDLSHKFHGKAPGKMKQERRQKKYRDELKTKRMISSDTPLMSAEKMREAQALSKTPYLVLSGNAKSGQTSD-ASGFATVEKEHPGSLTPMLGAKKVEHFLG 784
BLAST of GR405946 vs. TAIR peptide
Match: AT5G16780.1 (| Symbols: DOT2, MDF | SART-1 family | chr5:5517784-5521566 REVERSE LENGTH=820) HSP 1 Score: 245.743 bits (626), Expect = 6.898e-66 Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEG-KEAQYK------KEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLG 428 KKKSKLVGIVDD+G KE++ K K+IRIERTDEFGR LTPKEAFR++SHKFHGKGPGKMK+EKRMKQ+ EELK+KQMK+SDTPS SV+RMREAQA++KTPYLVLSGHVKPGQTSDP+SGFATVEKD+PG LTPMLGDRKVEHFLG Sbjct: 653 KKKSKLVGIVDDDGGKESKDKESKDRFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPGQTSDPQSGFATVEKDVPGSLTPMLGDRKVEHFLG 801
BLAST of GR405946 vs. TAIR peptide
Match: AT3G14700.1 (| Symbols: | SART-1 family | chr3:4940708-4941322 FORWARD LENGTH=204) HSP 1 Score: 97.4413 bits (241), Expect = 3.034e-21 Identity = 53/104 (50.96%), Postives = 78/104 (75.00%), Query Frame = 3 Query: 3 KKKSKLVGIVDDEGKEAQYK---KEIRIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFHEELKMKQMKSSDTPSMSVERMREAQARMKTPYLVL 305 K++ K+VG+ D+ ++ ++K K+I+I+R +++GRI+T KEA+R + H FHGKGPGK KQEK+ K+ HE+ K KQM+SS+ SVER+RE A KTPY+VL Sbjct: 106 KEEGKVVGVKDNNHEDDRFKDRFKDIQIQRVNKWGRIMTEKEAYRSLCHGFHGKGPGKKKQEKQRKK-HED-KSKQMESSE---RSVERIREIHAISKTPYIVL 204 The following BLAST results are available for this feature:
BLAST of GR405946 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 4
BLAST of GR405946 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR405946 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR405946 ID=GR405946; Name=GR405946; organism=Cicer arietinum; type=EST; length=429bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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