GR406626

EST Overview
NameGR406626
Unique NameGR406626
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length735
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406626 vs. TrEMBL
Match: B9MXM4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_593914 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.474e-15
Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 2
Query:    2 EKHMKESRSSQESDQSIGVGIWKEATEFFELVGTEESRKVIHPINPSKSLVEDARTFEHVRKEAEAS-----NVEEEYRKVKAILESYQPDEYKKKPKAARGAYEQGKNIRRSKSSNVECRQREPVRNDEITEPLGLEKSEKKIRMAHQHGKTEKKVSKAN 469
            EKH +ES SSQ SD+    G WKEAT+FFELV T   RKV    N    L+++    E  +K  +A+       +E  +KV+A    ++ +EY K PK ++ A + G +  RS+++ V   ++      ++ + +   + E++ RM  Q   TEK+ ++AN
Sbjct:  448 EKHGRESLSSQGSDRIDEAGEWKEATQFFELVRTNVPRKVTESENNDNILLQNTNIHERGQKVKKAATEAMQQQQENGKKVQAFTADHELEEYAKNPKVSKPARDHGGSNGRSEAAKVSHGEKGLAMKVQVAQEVFRVEDEERFRMNLQSIGTEKRQARAN 608          
BLAST of GR406626 vs. TrEMBL
Match: B9HF28_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_655335 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.034e-12
Identity = 72/241 (29.88%), Postives = 116/241 (48.13%), Query Frame = 2
Query:    2 EKHMKESRSSQESDQSIGVGIWKEATEFFELVGTEESRKVIHPINPSKSLVEDARTFEH---VRKEA-EASNVEEEY-RKVKAILESYQPDEYKKKPKAARGAYEQGKNIRRSKSSNVECRQREPVRNDEITEPLGLEKSEKKIRMAHQHGKTEKKVSKANCMGSEISKEVDGQEPRDVQCSXXXXXXXXXXXXXXXHHLSVKKHEQSQIMKENEKTQREAFAPEATEGEE---RVKDTGE 700
            EK  +ES SSQ SD+      WKEAT+FFELV T   RKVI   N      ++    E    V+K A EAS  + E  +KV+A+   ++ +EY K  K ++ A + G +  RS+++ V  R++   +  ++ + +   + E K+ M  Q  +T+K+ ++A+  GS+   E+ G+ PR                       +  KHE  Q  ++ EK      A  + E E+   R K+ GE
Sbjct:  284 EKLGRESLSSQGSDKVDEASEWKEATQFFELVRTNVPRKVIDLSNNDNIFPQNTNIHEQGQKVKKVAMEASQQQLEIGKKVQAVTADHELEEYAKNTKVSKPARDLGGSNGRSEAAKVAHREKGLEKKVQVAQEVLRVEDEDKLGMDKQSLETDKRRTRAD--GSQ-KHELTGEVPR-----------------------AQSKHEAKQTAEDKEKEPWLKEAVRSAENEKLFIRKKEGGE 498          
BLAST of GR406626 vs. TrEMBL
Match: D7SPB0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018928001 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.408e-11
Identity = 67/245 (27.35%), Postives = 118/245 (48.16%), Query Frame = 2
Query:    5 KHMKESRSSQESDQSIGVGIWKEATEFFELVGTEESRKVIHPINPSKSLVEDARTFEHVRKEAEASNVEEEYRKVKAILESY-QPDEYKKKPKAARGAYEQGKNIRRSKSSNVECRQREPVRNDEITEPLGLEKSEKKIRMAHQHGKTEKKVSKAN-CMGSEISKEVDGQEPRDVQCSXXXXXXXXXXXXXXXHHL-SVKKHEQSQIMKENEKTQREAFAPEATEGEERVKDTGELEKINGRSHE 730
            +H KES SSQES ++ G G WKEATEF+ELV  ++ RK     N  K LV++ +  E  +KE             +A +ES+ Q +E  KK  AA+ A+   +N      +   CR  E  + +      G +++EK  R+  +H + E K++ A+     +I  E+  Q+  +V+                     + +K ++++  +++EK  +EA   E TE + + ++   LE +  + +E
Sbjct:  448 RHGKESWSSQESYKTEGTGKWKEATEFYELVRGDKFRK--EQANNEKVLVKNKKVIESRQKEK------------RAAIESFEQQEESDKKTNAAQEAHGWEEN-----EAKEACRHEEHEKVEVAHVLCGWKENEKTWRVGMEHEEAEHKLNVADEWEEHDILIEIQ-QKQNEVEVKEAMKQENERKLKEAKERTGNERKLKKARENEKSEKRLKEALEQEETEKKLKAENEKRLEALKWQENE 672          
BLAST of GR406626 vs. TrEMBL
Match: B9S6D7_RICCO (Auxilin, putative OS=Ricinus communis GN=RCOM_0535530 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.055e-9
Identity = 64/244 (26.23%), Postives = 112/244 (45.90%), Query Frame = 2
Query:    2 EKHMKESRSSQESDQSIGVGIWKEATEFFELVGTEESRKVIHPINPSKSLVEDARTFEHVRKEAEAS-----NVEEEYRKVKAILESYQPDEYKKKPKAARGAYEQGKNIRRSKSSNVECRQREPVRNDEITEPLGLEKSEKKIRMAHQHGKTEKKVSKAN-CMGSEISKEVDGQEPRDVQCSXXXXXXXXXXXXXXXHHLSVKKHEQSQIMKENEKTQREA--FAPEATEGEERVKDTGELEK 709
            E + +ES SSQ SD   G G WKEAT+FFELV T + RK+    N    LV D+   +H +++ + +      ++E  +KVKA+    Q  EY K  + ++ A++      +S+ +N     ++     E +  +    +EKK     Q  +T+KK ++ +  +  E S EV  +E                         S+K  E+   +K+ ++++ +   F  E  + E   + T ELE+
Sbjct:  453 ENNGRESLSSQGSDSIDGAGEWKEATQFFELV-TNKPRKLFGLENNHNILVPDSNFHQHGKEKKKETVEAMQRLQENDKKVKAVRADNQLKEYPKASQMSKEAFDCEIISGKSEEANKLKVDKKVQVAQEASRQVA---NEKKFETYWQPVETDKKQTRPDVSLKHESSLEVQQKESTSAV------------------RQSMKHKEKGSWLKKGDRSKGDVKIFTCEQEDSERGQRKTFELEE 674          
The following BLAST results are available for this feature:
BLAST of GR406626 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9MXM4_POPTR6.474e-1532.92Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HF28_POPTR1.034e-1229.88Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SPB0_VITVI7.408e-1127.35Whole genome shotgun sequence of line PN40024, sca... [more]
B9S6D7_RICCO9.055e-926.23Auxilin, putative OS=Ricinus communis GN=RCOM_0535... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 178..192
score
NoneNo IPR availableSEGsegsegcoord: 14..34
score
NoneNo IPR availableSEGsegsegcoord: 8..18
score
NoneNo IPR availableSEGsegsegcoord: 8..34
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406626 ID=GR406626; Name=GR406626; organism=Cicer arietinum; type=EST; length=735bp
AGAAAAGCACATGAAGGAATCCAGGTCATCTCAAGAATCAGATCAAAGTA
TTGGAGTTGGGATATGGAAAGAAGCAACTGAATTTTTTGAATTGGTTGGA
ACAGAAGAATCTCGAAAGGTAATTCATCCTATAAATCCTTCCAAGAGTTT
GGTGGAAGATGCCAGAACATTTGAGCATGTGAGGAAAGAAGCAGAAGCAT
CTAATGTCGAAGAAGAATACAGAAAGGTAAAAGCAATCCTAGAAAGTTAT
CAGCCTGATGAATACAAGAAGAAACCTAAAGCAGCAAGAGGGGCTTATGA
ACAGGGCAAAAACATTAGGAGATCTAAATCATCTAATGTGGAATGCAGGC
AGAGAGAGCCTGTCAGGAATGACGAAATTACTGAACCTTTAGGGCTTGAA
AAGAGTGAGAAAAAGATAAGAATGGCCCATCAACATGGAAAAACTGAAAA
GAAAGTAAGTAAAGCCAATTGCATGGGAAGTGAGATATCAAAAGAGGTTG
ATGGACAAGAACCAAGAGATGTTCAGTGTAGCTTGAAGCTCAAAGAAAAT
GAGAAGAAACTAAAACAGGATGAAGAGCACCATCTGAGTGTAAAAAAGCA
TGAGCAATCTCAAATAATGAAAGAAAATGAAAAAACTCAAAGAGAAGCTT
TTGCTCCTGAAGCAACAGAGGGAGAGGAAAGAGTGAAAGATACTGGGGAG
CTTGAAAAGATTAATGGAAGATCACATGAAGCTAT
back to top