GR406947

EST Overview


Name	GR406947
Unique Name	GR406947
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	325

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406947 vs. TrEMBL
Match: B9H1B6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555328 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.630e-11
Identity = 37/48 (77.08%), Postives = 39/48 (81.25%), Query Frame = -1

Query:  164 EMVPPHEYLGG----SRKMGGKSVFEGVGRTLKGRDLSRVCDAVWSQT 295
            EMVPPHEYL      S+KMGG SV EGVGRTLKGRD+SRV DAVWSQT
Sbjct:  166 EMVPPHEYLAREYAQSQKMGGASVVEGVGRTLKGRDMSRVRDAVWSQT 213

[Close]

BLAST of GR406947 vs. TrEMBL
Match: B9RXL7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0904750 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.128e-11
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = -1

Query:  164 EMVPPHEYLGG----SRKMGGKSVFEGVGRTLKGRDLSRVCDAVWSQT 295
            EMVPPHEYL      SRKMG  SVFEGVGRTLKGRDL RV DAVW+QT
Sbjct:  170 EMVPPHEYLARVYARSRKMGNASVFEGVGRTLKGRDLRRVRDAVWNQT 217

[Close]

BLAST of GR406947 vs. TrEMBL
Match: B9HZ36_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822730 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.056e-10
Identity = 36/48 (75.00%), Postives = 37/48 (77.08%), Query Frame = -1

Query:  164 EMVPPHEYLGG----SRKMGGKSVFEGVGRTLKGRDLSRVCDAVWSQT 295
            EMVPPHEYL      SRK GG SV EGVGRTLKGRD+ RV DAVWSQT
Sbjct:  158 EMVPPHEYLAREYARSRKTGGASVVEGVGRTLKGRDMRRVRDAVWSQT 205

[Close]

BLAST of GR406947 vs. TrEMBL
Match: D7KMH7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471309 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.602e-9
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -1

Query:  164 MVPPHEYLGGSRKM------GGKSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            M+PPHEYL  S+K       GG SVFEG+GRTLKGR+L RV DA+WSQT
Sbjct:  149 MMPPHEYLAQSQKRRSRKSGGGGSVFEGIGRTLKGRELRRVRDAIWSQT 197

[Close]

BLAST of GR406947 vs. TrEMBL
Match: Q9SAA7_ARATH (At1g11700 OS=Arabidopsis thaliana GN=At1g11700 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.796e-9
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -1

Query:  164 MVPPHEYLGGSRKM------GGKSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            M+PPHEYL  S++       GG SVFEGVGRTLKGR+L RV DA+WSQT
Sbjct:  149 MMPPHEYLAKSQQRRSRKSGGGGSVFEGVGRTLKGRELRRVRDAIWSQT 197

[Close]

BLAST of GR406947 vs. TrEMBL
Match: Q8LBU3_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.686e-8
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = -1

Query:  164 MVPPHEYLGGS-----RKMGG--KSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            M+PPHEYL  S     RK+GG   SVF+GVGRTLKGR+L RV DA+WSQT
Sbjct:  150 MMPPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQT 199

[Close]

BLAST of GR406947 vs. TrEMBL
Match: Q8L864_ARATH (Putative uncharacterized protein At4g21930 OS=Arabidopsis thaliana GN=At4g21930 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.686e-8
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = -1

Query:  164 MVPPHEYLGGSRKMG--GKSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            MVPPHEY+    + G  G SVF GVGRTLKGRD+ RV DAVWSQT
Sbjct:  135 MVPPHEYVAARSRNGDGGSSVFLGVGRTLKGRDMRRVRDAVWSQT 179

[Close]

BLAST of GR406947 vs. TrEMBL
Match: O80698_ARATH (At1g61930 OS=Arabidopsis thaliana GN=At1g61930 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.686e-8
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = -1

Query:  164 MVPPHEYLGGS-----RKMGG--KSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            M+PPHEYL  S     RK+GG   SVF+GVGRTLKGR+L RV DA+WSQT
Sbjct:  150 MMPPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQT 199

[Close]

BLAST of GR406947 vs. TrEMBL
Match: O49716_ARATH (Putative uncharacterized protein AT4g21930 OS=Arabidopsis thaliana GN=T8O5.140 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.686e-8
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = -1

Query:  164 MVPPHEYLGGSRKMG--GKSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            MVPPHEY+    + G  G SVF GVGRTLKGRD+ RV DAVWSQT
Sbjct:  145 MVPPHEYVAARSRNGDGGSSVFLGVGRTLKGRDMRRVRDAVWSQT 189

[Close]

BLAST of GR406947 vs. TrEMBL
Match: C5X731_SORBI (Putative uncharacterized protein Sb02g000350 OS=Sorghum bicolor GN=Sb02g000350 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.408e-8
Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = -1

Query:  164 LEMVPPHEYLGGSRKM---GGKSVFEGVGRTLKGRDLSRVCDAVWSQT 298
            LE VPPHEYL   R+    GG SV EG GRTLKGRD++RV DAVWS+T
Sbjct:  119 LEWVPPHEYL--QRRWCGAGGASVLEGAGRTLKGRDITRVRDAVWSKT 164

[Close]

BLAST of GR406947 vs. TAIR peptide
Match: AT1G11700.1 (| Symbols: | Protein of unknown function, DUF584 | chr1:3945852-3946457 FORWARD LENGTH=201)

HSP 1 Score: 63.929 bits (154), Expect = 2.306e-11
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -1

Query:  164 MVPPHEYLGGSRKM------GGKSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            M+PPHEYL  S++       GG SVFEGVGRTLKGR+L RV DA+WSQT
Sbjct:  149 MMPPHEYLAKSQQRRSRKSGGGGSVFEGVGRTLKGRELRRVRDAIWSQT 197

[Close]

BLAST of GR406947 vs. TAIR peptide
Match: AT4G21930.1 (| Symbols: | Protein of unknown function, DUF584 | chr4:11639893-11640444 FORWARD LENGTH=183)

HSP 1 Score: 62.3882 bits (150), Expect = 6.710e-11
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = -1

Query:  164 MVPPHEYLGGSRKMG--GKSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            MVPPHEY+    + G  G SVF GVGRTLKGRD+ RV DAVWSQT
Sbjct:  135 MVPPHEYVAARSRNGDGGSSVFLGVGRTLKGRDMRRVRDAVWSQT 179

[Close]

BLAST of GR406947 vs. TAIR peptide
Match: AT1G61930.1 (| Symbols: | Protein of unknown function, DUF584 | chr1:22893218-22893829 FORWARD LENGTH=203)

HSP 1 Score: 62.3882 bits (150), Expect = 6.710e-11
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = -1

Query:  164 MVPPHEYLGGS-----RKMGG--KSVFEGVGRTLKGRDLSRVCDAVWSQT 292
            M+PPHEYL  S     RK+GG   SVF+GVGRTLKGR+L RV DA+WSQT
Sbjct:  150 MMPPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQT 199

[Close]

BLAST of GR406947 vs. TAIR peptide
Match: AT3G45210.1 (| Symbols: | Protein of unknown function, DUF584 | chr3:16557482-16557928 REVERSE LENGTH=148)

HSP 1 Score: 50.8322 bits (120), Expect = 2.020e-7
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = -1

Query:  164 VPPHEYLGGSRKMGGKSVFEGVGRTLKGRDLSRVCDAVWSQT 289
            +PPHEYL  +R M   SV EG+GRTLKGRD+SRV +A+  +T
Sbjct:  104 LPPHEYLAKTR-MASFSVHEGIGRTLKGRDMSRVRNAILEKT 144

[Close]

BLAST of GR406947 vs. TAIR peptide
Match: AT5G60680.1 (| Symbols: | Protein of unknown function, DUF584 | chr5:24386247-24386738 FORWARD LENGTH=163)

HSP 1 Score: 50.0618 bits (118), Expect = 3.446e-7
Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = -1

Query:  167 EMVPPHEYLGGSRKMGGKSVFEGVGRTLKGRDLSRVCDAVWSQ 295
            + +PPHE+L  +R M   SV EGVGRTLKGRDLSRV +A++ +
Sbjct:  117 DWLPPHEFLAKTR-MASFSVHEGVGRTLKGRDLSRVRNAIFEK 158

The following BLAST results are available for this feature:

BLAST of GR406947 vs. TrEMBL
BLAST of GR406947 vs. TAIR peptide

BLAST of GR406947 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9H1B6_POPTR	1.630e-11	77.08	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RXL7_RICCO	2.128e-11	77.08	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9HZ36_POPTR	1.056e-10	75.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KMH7_ARALY	2.602e-9	65.31	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9SAA7_ARATH	5.796e-9	65.31	At1g11700 OS=Arabidopsis thaliana GN=At1g11700 PE=...	[more]
Q8LBU3_ARATH	1.686e-8	66.00	Putative uncharacterized protein OS=Arabidopsis th...	[more]
Q8L864_ARATH	1.686e-8	68.89	Putative uncharacterized protein At4g21930 OS=Arab...	[more]
O80698_ARATH	1.686e-8	66.00	At1g61930 OS=Arabidopsis thaliana GN=At1g61930 PE=...	[more]
O49716_ARATH	1.686e-8	68.89	Putative uncharacterized protein AT4g21930 OS=Arab...	[more]
C5X731_SORBI	6.408e-8	66.67	Putative uncharacterized protein Sb02g000350 OS=So...	[more]

BLAST of GR406947 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G11700.1	2.306e-11	65.31	\| Symbols: \| Protein of unknown function, DUF584 ...	[more]
AT4G21930.1	6.710e-11	68.89	\| Symbols: \| Protein of unknown function, DUF584 ...	[more]
AT1G61930.1	6.710e-11	66.00	\| Symbols: \| Protein of unknown function, DUF584 ...	[more]
AT3G45210.1	2.020e-7	59.52	\| Symbols: \| Protein of unknown function, DUF584 ...	[more]
AT5G60680.1	3.446e-7	58.14	\| Symbols: \| Protein of unknown function, DUF584 ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 42..51 score
None	No IPR available	SEG	seg	seg	coord: 2..9 score
IPR007608	Protein of unknown function DUF584	PFAM	PF04520	DUF584	coord: 2..57 score: 1.2

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406947 ID=GR406947; Name=GR406947; organism=Cicer arietinum; type=EST; length=325bp
CCAACAACCACCAAGTGGAATATGATTAATTAATTAACCACAATATTAAT
AACAACAACAACTAACTAATAATTAACAAAATTACAAACAAGGCGGAAGC
AATAACCATTTTTTAAACAAAAAAAAAGCCACCACCTGAACCGGACATTC
AACCATCGAACCCGGTCTGACTCCACACAGCATCACAAACCCGGCTCAAA
TCACGACCTTTCAAAGTCCGACCCACACCTTCAAAAACCGATTTCCCCCC
CATCTTACGGCTACCCCCCAAATACTCGTGTGGCGGAACCATCTCCAAAT
CATCATCGTCAACATCGTCGTCGTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

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