GR407005

EST Overview


Name	GR407005
Unique Name	GR407005
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	596

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_ARATH (Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.580e-38
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QEASMLTFEGQKIQG  +IVAKLTSLPFQQ  H I+TVDCQPS   +GMLVFVSGN QLAGE+HALKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   33 QEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 126

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_ORYSJ (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.090e-26
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = -2

Query:  317 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNY 595
            Q+ SMLTFEGQ+  G++ I  KL SLPF Q HH I TVDCQPS    GMLVFVSG+ +   ++H LKFSQMF L+P   G++YVQND+FRLNY
Sbjct:   30 QDGSMLTFEGQQFLGAAAIAGKLGSLPFAQCHHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDMFRLNY 121

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_CANAL (Nuclear transport factor 2 OS=Candida albicans GN=NTF2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.755e-21
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = -2

Query:  314 SMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 586
            SMLTFE  ++QG+ +IV KL SLPFQ+  H I+T+D QP++ N  +LV V+G   +  EQ+A ++SQ+FHLIP   GSYYV NDIFRLNY+
Sbjct:   35 SMLTFETSQLQGARDIVEKLASLPFQKVAHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIP-DNGSYYVFNDIFRLNYS 124

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_ASHGO (Nuclear transport factor 2 OS=Ashbya gossypii GN=NTF2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.755e-21
Identity = 50/94 (53.19%), Postives = 70/94 (74.47%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            ++ SMLTFE  ++QG+ +IV KL SLPFQ+  H ITT+D QP++ N  +LV ++G+  +  EQ+A +FSQ+FHL+P    SYYV NDIFRLNY+
Sbjct:   32 RDQSMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMP-EGNSYYVFNDIFRLNYS 124

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_KLULA (Nuclear transport factor 2 OS=Kluyveromyces lactis GN=NTF2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.105e-21
Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            +E SMLTFE  ++QG+ +IV KL SLPFQ+  H ITT+D QP++ N  +LV ++G+  +  EQ+  +FSQ+FHL+P    SYYV NDIFRLNY+
Sbjct:   32 REQSMLTFETTQLQGAKDIVEKLVSLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMP-EGSSYYVYNDIFRLNYS 124

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_CANGA (Nuclear transport factor 2 OS=Candida glabrata GN=NTF2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.105e-21
Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            ++ SMLTFE  ++QG+ +IV KL SLPFQ+  H ITT+D QP++ N  +LV ++G+  +  EQ+  +FSQ+FHLIP    SYYV NDIFRLNY+
Sbjct:   32 RDESMLTFETSQLQGAKSIVEKLVSLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIP-DGNSYYVFNDIFRLNYS 124

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_YEAST (Nuclear transport factor 2 OS=Saccharomyces cerevisiae GN=NTF2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.667e-21
Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = -2

Query:  314 SMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 586
            SMLTFE  ++QG+ +IV KL SLPFQ+  H ITT+D QP++ N  +LV ++G+  +  EQ+  +FSQ+FHLIP    SYYV NDIFRLNY+
Sbjct:   35 SMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIP-DGNSYYVFNDIFRLNYS 124

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_DEBHA (Nuclear transport factor 2 OS=Debaryomyces hansenii GN=NTF2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.667e-21
Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            +E SMLTFE  ++QG+ +IV KL SLPFQ+  H I+T+D QP + N  +LV V+G   +  EQ+A ++SQ+FHLIP    SYYV NDIFRLNY+
Sbjct:   32 REQSMLTFETSQLQGAKDIVEKLVSLPFQKVAHRISTLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIP-DGNSYYVFNDIFRLNYS 124

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_SCHPO (Nuclear transport factor 2 OS=Schizosaccharomyces pombe GN=ntf2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 9.627e-20
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = -2

Query:  317 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNY 595
            +E SML+FEG ++QG+  IV KL SLPFQ+  H I+T+D QP+     ++V V+G   L  EQ A ++SQ+FHL+    G+YYV ND+FRLNY
Sbjct:   31 REESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDLFRLNY 122

[Close]

BLAST of GR407005 vs. SwissProt
Match: NTF2_EMENI (Nuclear transport factor 2 OS=Emericella nidulans GN=ntf2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.064e-18
Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = -2

Query:  317 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNY 595
            ++ SMLTFE   IQG + I+ KLTSLPFQ+  H ++T+D QPS  + G+LV V+G   +  E++ + ++Q F L+P   GSY+V ND+FRL Y
Sbjct:   31 RDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQHQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLIY 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: C6TFP4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.018e-42
Identity = 86/94 (91.49%), Postives = 88/94 (93.62%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QE SMLTFEGQKIQG+SNIVAKLTSLPFQQ HHSI+TVDCQPS VNAGMLVFVSGN QLAGEQH LKFSQMFHLIPTPQGSYYV NDIFRLNYA
Sbjct:   30 QEGSMLTFEGQKIQGASNIVAKLTSLPFQQCHHSISTVDCQPSGVNAGMLVFVSGNLQLAGEQHTLKFSQMFHLIPTPQGSYYVLNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: B7FLL8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-41
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QE SMLTFEGQKIQGS NIVAKLTSLPFQQ HHSITTVDCQPS  N GMLVFVSGN QLAGEQ+ALKFSQMFHL+PTPQGSYYV NDIFRLNYA
Sbjct:   30 QEGSMLTFEGQKIQGSPNIVAKLTSLPFQQCHHSITTVDCQPSGANGGMLVFVSGNLQLAGEQYALKFSQMFHLMPTPQGSYYVMNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: A5BM29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001831 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-39
Identity = 82/94 (87.23%), Postives = 85/94 (90.43%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QE+SMLTFEGQKIQGS NIVAKLTSLPFQQ  HSITTVDCQPS    GMLVFVSGN QLAGEQHALKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   30 QESSMLTFEGQKIQGSPNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: B9RMD1_RICCO (Nuclear transport factor, putative OS=Ricinus communis GN=RCOM_1079720 PE=4 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.914e-39
Identity = 79/94 (84.04%), Postives = 84/94 (89.36%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QEASMLTFEGQKIQG+ N+VAKLTSLPFQQ  HSITTVDCQPS    GMLVFVSGN +L GEQHALKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   30 QEASMLTFEGQKIQGAQNVVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLKLTGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: A9PDH2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554771 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.387e-38
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            Q+ASMLTFEGQK QGS NIVAKLT+LPF Q  H ITTVDCQPS    GMLVFVSGN QLAGEQHALKFSQMFHL+PTPQGSYYV NDIFRLNYA
Sbjct:   30 QDASMLTFEGQKTQGSQNIVAKLTALPFHQCKHHITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSYYVYNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: Q8LC75_ARATH (Nuclear transport factor 2, putative OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.196e-37
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QEASMLTFEGQKIQG  +IVAKLTSLPFQQ  H I+TVDCQPS   +GMLVFVSGN QLAGE+HALKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   30 QEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: A1YN06_BRACM (Putative nuclear transport factor 2 OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.868e-37
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QEASMLTFEGQKIQG  +IVAKLTSLPFQQ  H+I+TVDCQPS   +GMLVFVSGN QLAGE+HALKFSQMFHL+PTPQGS+YV NDIFRLNY+
Sbjct:   30 QEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHNISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYS 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: D7KBV8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472998 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.388e-37
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QEASMLTFEGQKIQG  +IVAKLTSLPFQQ  H I+TVDCQPS   +GMLVFVSGN QLAGE+H LKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   30 QEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHTLKFSQMFHLMPTPQGSFYVFNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: A9PBT2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_548036 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.343e-37
Identity = 77/94 (81.91%), Postives = 81/94 (86.17%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            Q+ SMLTFEGQK QGS NIVAKL +LPFQQ  H ITTVDCQPS    GMLVFVSGN QLAGEQHALKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   30 QDGSMLTFEGQKTQGSQNIVAKLIALPFQQCKHLITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 123

[Close]

BLAST of GR407005 vs. TrEMBL
Match: D7KBN7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890252 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.063e-36
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QE SMLTFEGQKIQGS NIVAKLTSLPFQQ  H+ITTVDCQPS    GMLVFVSGN QLAGEQHALKFSQMFHLI + QG+YYV NDIFRLNYA
Sbjct:   30 QEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCKHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRLNYA 122

[Close]

BLAST of GR407005 vs. TAIR peptide
Match: AT1G27970.1 (| Symbols: NTF2B | nuclear transport factor 2B | chr1:9746921-9747787 FORWARD LENGTH=126)

HSP 1 Score: 159.073 bits (401), Expect = 1.655e-39
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QEASMLTFEGQKIQG  +IVAKLTSLPFQQ  H I+TVDCQPS   +GMLVFVSGN QLAGE+HALKFSQMFHL+PTPQGS+YV NDIFRLNYA
Sbjct:   33 QEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 126

[Close]

BLAST of GR407005 vs. TAIR peptide
Match: AT1G27310.1 (| Symbols: NTF2A | nuclear transport factor 2A | chr1:9484615-9485790 REVERSE LENGTH=122)

HSP 1 Score: 152.525 bits (384), Expect = 1.549e-37
Identity = 78/94 (82.98%), Postives = 81/94 (86.17%), Query Frame = -2

Query:  314 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNYA 595
            QE SMLTFEGQKIQGS NIVAKLT LPFQQ  H+ITTVDCQPS    GMLVFVSGN QLAGEQHALKFSQMFHLI + QG+YYV NDIFRLNYA
Sbjct:   30 QEGSMLTFEGQKIQGSQNIVAKLTGLPFQQCKHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRLNYA 122

[Close]

BLAST of GR407005 vs. TAIR peptide
Match: AT1G27970.2 (| Symbols: NTF2B | nuclear transport factor 2B | chr1:9746921-9748306 FORWARD LENGTH=134)

HSP 1 Score: 149.058 bits (375), Expect = 1.713e-36
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = -2

Query:  329 QEASMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAGMLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIF 595
            QEASMLTFEGQKIQG  +IVAKLTSLPFQQ  H I+TVDCQPS   +GMLVFVSGN QLAGE+HALKFSQMFHL+PTPQGS+YV NDIF
Sbjct:   33 QEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIF 121

[Close]

BLAST of GR407005 vs. TAIR peptide
Match: AT1G11570.2 (| Symbols: NTL | NTF2-like | chr1:3883280-3883956 FORWARD LENGTH=132)

HSP 1 Score: 115.161 bits (287), Expect = 2.741e-26
Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = -2

Query:  317 SMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVNAG---MLVFVSGNFQLAGEQHALKFSQMFHLIPTPQGSYYVQNDIFRLNY 586
            S+LTFEGQ I G  NI  KL  LPF Q HH I+TVD QPS++  G   +LVFVSG+ QL GE H L+FSQ FHLIP  QGS++VQN++FRLNY
Sbjct:   39 SLLTFEGQTIYGVDNISNKLKQLPFDQCHHLISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQTFHLIPVLQGSFFVQNEMFRLNY 131

[Close]

BLAST of GR407005 vs. TAIR peptide
Match: AT1G11570.1 (| Symbols: NTL | NTF2-like | chr1:3883280-3883663 FORWARD LENGTH=127)

HSP 1 Score: 81.6481 bits (200), Expect = 3.359e-16
Identity = 43/74 (58.11%), Postives = 52/74 (70.27%), Query Frame = -2

Query:  374 SMLTFEGQKIQGSSNIVAKLTSLPFQQSHHSITTVDCQPSAVN---AGMLVFVSGNFQLAGEQHALKFSQMFHL 586
            S+LTFEGQ I G  NI  KL  LPF Q HH I+TVD QPS++     G+LVFVSG+ QL GE H L+FSQ++ L
Sbjct:   39 SLLTFEGQTIYGVDNISNKLKQLPFDQCHHLISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQVYLL 112

The following BLAST results are available for this feature:

BLAST of GR407005 vs. SwissProt
BLAST of GR407005 vs. TrEMBL
BLAST of GR407005 vs. TAIR peptide

BLAST of GR407005 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
NTF2_ARATH	1.580e-38	82.98	Nuclear transport factor 2 OS=Arabidopsis thaliana...	[more]
NTF2_ORYSJ	3.090e-26	61.29	Nuclear transport factor 2 OS=Oryza sativa subsp. ...	[more]
NTF2_CANAL	1.755e-21	56.04	Nuclear transport factor 2 OS=Candida albicans GN=...	[more]
NTF2_ASHGO	1.755e-21	53.19	Nuclear transport factor 2 OS=Ashbya gossypii GN=N...	[more]
NTF2_KLULA	5.105e-21	53.19	Nuclear transport factor 2 OS=Kluyveromyces lactis...	[more]
NTF2_CANGA	5.105e-21	53.19	Nuclear transport factor 2 OS=Candida glabrata GN=...	[more]
NTF2_YEAST	6.667e-21	54.95	Nuclear transport factor 2 OS=Saccharomyces cerevi...	[more]
NTF2_DEBHA	6.667e-21	54.26	Nuclear transport factor 2 OS=Debaryomyces hanseni...	[more]
NTF2_SCHPO	9.627e-20	50.54	Nuclear transport factor 2 OS=Schizosaccharomyces ...	[more]
NTF2_EMENI	1.064e-18	47.31	Nuclear transport factor 2 OS=Emericella nidulans ...	[more]

BLAST of GR407005 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TFP4_SOYBN	1.018e-42	91.49	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FLL8_MEDTR	1.125e-41	89.36	Putative uncharacterized protein OS=Medicago trunc...	[more]
A5BM29_VITVI	1.053e-39	87.23	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RMD1_RICCO	8.914e-39	84.04	Nuclear transport factor, putative OS=Ricinus comm...	[more]
A9PDH2_POPTR	3.387e-38	84.04	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8LC75_ARATH	2.196e-37	82.98	Nuclear transport factor 2, putative OS=Arabidopsi...	[more]
A1YN06_BRACM	2.868e-37	81.91	Putative nuclear transport factor 2 OS=Brassica ca...	[more]
D7KBV8_ARALY	6.388e-37	81.91	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9PBT2_POPTR	8.343e-37	81.91	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KBN7_ARALY	7.063e-36	84.04	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GR407005 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G27970.1	1.655e-39	82.98	\| Symbols: NTF2B \| nuclear transport factor 2B \| c...	[more]
AT1G27310.1	1.549e-37	82.98	\| Symbols: NTF2A \| nuclear transport factor 2A \| c...	[more]
AT1G27970.2	1.713e-36	82.02	\| Symbols: NTF2B \| nuclear transport factor 2B \| c...	[more]
AT1G11570.2	2.741e-26	62.37	\| Symbols: NTL \| NTF2-like \| chr1:3883280-3883956 ...	[more]
AT1G11570.1	3.359e-16	58.11	\| Symbols: NTL \| NTF2-like \| chr1:3883280-3883663 ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 15..45 score: NAcoord: 53..68 score
None	No IPR available	GENE3D	3.10.450.50	no description	coord: 2..93 score: 2.9
None	No IPR available	PANTHER	PTHR12612	NUCLEAR TRANSPORT FACTOR 2	coord: 1..94 score: 3.6
None	No IPR available	SUPERFAMILY	54427	NTF2-like	coord: 1..94 score: 6.3
IPR002075	Nuclear transport factor 2	PFAM	PF02136	NTF2	coord: 1..91 score: 2.4
IPR018222	Nuclear transport factor 2, Eukaryote	PROFILE	PS50177	NTF2_DOMAIN	coord: 1..91 score: 23

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407005 ID=GR407005; Name=GR407005; organism=Cicer arietinum; type=EST; length=596bp
CGCAAATAAAAAATTACCATAACATTCATAAACCAATTTGTTGAGAGGTA
AATTGGATAGAGATGCTTGGGCCCCATATCTCAAATCAAAAATATATTTG
GGTTTTAAATCTCCCAAACCCAGTAATATTTCGTCAATTTATCCTTGAAG
CTGTTTTCTGACGAATCACAAGAAAAAATTTTAAATGCAACAAGCACAAT
TACGTGTCCGACACAACCAACTAAAATGAACCCATTTTCAATTTCAAATG
TGCAATATATAGGCAAACTTCTTCTATGGCCTTTCAGGTCATATATTTGA
TGGTCTATCTTCAGGCATAGTTCAAACGGAATATGTCATTCTGCACATAA
TAGCTTCCTTGCGGGGTTGGTATCAAATGGAACATCTGGCTGAACTTGAG
GGCGTGTTGTTCACCGGCGAGTTGGAAATTACCACTGACAAAAACAAGCA
TGCCGGCGTTGACAGCGGAGGGTTGACAATCGACGGTGGTGATGGAATGA
TGGGACTGTTGGAAAGGGAGGGAAGTGAGCTTGGCGACAATGTTGGAGGA
ACCTTGAATCTTCTGACCTTCGAAAGTGAGCATGGAAGCTTCTTGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR002075	NTF2_dom
IPR018222	Nuclear_transport_factor_2_euk

Search form