GR409528

EST Overview


Name	GR409528
Unique Name	GR409528
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	571

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.822e-33
Identity = 75/107 (70.09%), Postives = 79/107 (73.83%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV LDD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  306 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.059e-33
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV +EE PSNVADLL
Sbjct:  307 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNVIIEELPSNVADLL 413

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 9.042e-33
Identity = 74/116 (63.79%), Postives = 80/116 (68.97%), Query Frame = -3

Query:  186 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQ+F NV +EE P+NVADLL
Sbjct:  299 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 414

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.042e-33
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  306 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.042e-33
Identity = 73/107 (68.22%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV +EE P+NVADLL
Sbjct:  307 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/107 (67.29%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD RI+FD+Q+F NV VEE P+NVADLL
Sbjct:  304 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIVFDVQRFYNVTVEELPANVADLL 410

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/107 (67.29%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQ+F NV +EE P+NVADLL
Sbjct:  308 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL 414

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.631e-32
Identity = 74/116 (63.79%), Postives = 80/116 (68.97%), Query Frame = -3

Query:  186 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  +D R+LFDIQKF NV +EE P+NVADLL
Sbjct:  299 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYQHRIGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 414

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF4A6_TOBAC (Eukaryotic initiation factor 4A-6 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.631e-32
Identity = 73/115 (63.48%), Postives = 79/115 (68.70%), Query Frame = -3

Query:  189 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGV+INFV  DD R+LFDIQKF NV +EE P+NVADL
Sbjct:  139 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADL 253

[Close]

BLAST of GR409528 vs. SwissProt
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.436e-32
Identity = 73/116 (62.93%), Postives = 79/116 (68.10%), Query Frame = -3

Query:  186 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IG SG FGRKGV+INFV  DD R+LFDIQKF NV +EE P+NVADLL
Sbjct:  298 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413

[Close]

BLAST of GR409528 vs. TrEMBL
Match: B9P8S3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_297570 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.463e-32
Identity = 77/116 (66.38%), Postives = 80/116 (68.97%), Query Frame = -3

Query:  186 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  275 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDDRMLFDIQKFYNVVVEELPSNVADLL 390

[Close]

BLAST of GR409528 vs. TrEMBL
Match: B9DHY5_ARATH (AT1G54270 protein (Fragment) OS=Arabidopsis thaliana GN=AT1G54270 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.463e-32
Identity = 75/107 (70.09%), Postives = 79/107 (73.83%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV LDD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  222 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 328

[Close]

BLAST of GR409528 vs. TrEMBL
Match: A9PA53_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_681660 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.463e-32
Identity = 77/116 (66.38%), Postives = 80/116 (68.97%), Query Frame = -3

Query:  186 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  298 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDDRMLFDIQKFYNVVVEELPSNVADLL 413

[Close]

BLAST of GR409528 vs. TrEMBL
Match: A9PD17_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645764 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.167e-32
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV +EE PSNVADLL
Sbjct:  307 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLFDIQKFYNVVIEELPSNVADLL 413

[Close]

BLAST of GR409528 vs. TrEMBL
Match: D7STP1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035374001 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.361e-32
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQ+F NV VEE PSNVADLL
Sbjct:  307 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNVVVEELPSNVADLL 413

[Close]

BLAST of GR409528 vs. TrEMBL
Match: A5BNE8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040122 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.361e-32
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQ+F NV VEE PSNVADLL
Sbjct:  307 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNVVVEELPSNVADLL 413

[Close]

BLAST of GR409528 vs. TrEMBL
Match: C5Z8X0_SORBI (Putative uncharacterized protein Sb10g028940 OS=Sorghum bicolor GN=Sb10g028940 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.223e-31
Identity = 73/107 (68.22%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV +EE P+NVADLL
Sbjct:  308 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 414

[Close]

BLAST of GR409528 vs. TrEMBL
Match: B9RK89_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1047550 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.223e-31
Identity = 74/107 (69.16%), Postives = 77/107 (71.96%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGR G FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  658 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRGGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 764

[Close]

BLAST of GR409528 vs. TrEMBL
Match: B7EPR0_ORYSJ (cDNA clone:001-114-H08, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.223e-31
Identity = 74/116 (63.79%), Postives = 80/116 (68.97%), Query Frame = -3

Query:  186 KWGGMSPIFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 533
            K  G     S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL INYDLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQ+F NV +EE P+NVADLL
Sbjct:  299 KMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 414

[Close]

BLAST of GR409528 vs. TrEMBL
Match: A8MRZ7_ARATH (Uncharacterized protein At3g13920.3 OS=Arabidopsis thaliana GN=At3g13920 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.223e-31
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  296 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 402

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT1G54270.2 (| Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018 FORWARD LENGTH=407)

HSP 1 Score: 142.124 bits (357), Expect = 1.911e-34
Identity = 75/107 (70.09%), Postives = 79/107 (73.83%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV LDD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  301 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 407

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT1G54270.1 (| Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018 FORWARD LENGTH=412)

HSP 1 Score: 142.124 bits (357), Expect = 1.911e-34
Identity = 75/107 (70.09%), Postives = 79/107 (73.83%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV LDD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  306 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT3G13920.4 (| Symbols: EIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407)

HSP 1 Score: 139.813 bits (351), Expect = 9.485e-34
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  301 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 407

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT3G13920.3 (| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594094 REVERSE LENGTH=402)

HSP 1 Score: 139.813 bits (351), Expect = 9.485e-34
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  296 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 402

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT3G13920.1 (| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412)

HSP 1 Score: 139.813 bits (351), Expect = 9.485e-34
Identity = 74/107 (69.16%), Postives = 78/107 (72.90%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+LFDIQKF NV VEE PSNVADLL
Sbjct:  306 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT1G72730.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:27378040-27379593 REVERSE LENGTH=414)

HSP 1 Score: 132.109 bits (331), Expect = 1.978e-31
Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINF+  +D R++ DIQ+F NV VEE PSNVADLL
Sbjct:  308 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT3G19760.1 (| Symbols: EIF4A-III | eukaryotic initiation factor 4A-III | chr3:6863790-6866242 FORWARD LENGTH=408)

HSP 1 Score: 110.153 bits (274), Expect = 8.048e-25
Identity = 59/107 (55.14%), Postives = 70/107 (65.42%), Query Frame = -3

Query:  186 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNVADLL 506
            S   GDM Q  RD    EFRSG    LIT  +  RGI   QVSL INYDLP+  E + H IGRSG FGRKGVAINFV  DD +IL DI+++ +  ++E P NVADL+
Sbjct:  302 SSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT3G13920.2 (| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592586-4594128 REVERSE LENGTH=415)

HSP 1 Score: 103.99 bits (258), Expect = 5.768e-23
Identity = 55/85 (64.71%), Postives = 59/85 (69.41%), Query Frame = -3

Query:  252 SPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARIL 506
            S   GDM Q  RD   REFRSG    LIT  LL RGI   QVSL IN+DLP+QPEN+ H IGRSG FGRKGVAINFV  DD R+L
Sbjct:  306 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT1G51380.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:19047960-19049967 FORWARD LENGTH=392)

HSP 1 Score: 81.2629 bits (199), Expect = 4.004e-16
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = -3

Query:  198 IFSPPQGDMAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFVPLDDARILFDIQKFSNVAVEEFPSNV 512
            I S   GD  Q  RD    +FRS     LI   +  RGI    VS  INYD+P+ PE + H IGR+G FGR+GVAINFV   D + L DI++     + E P+++
Sbjct:  287 IVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMPADL 391

[Close]

BLAST of GR409528 vs. TAIR peptide
Match: AT5G11200.3 (| Symbols: | DEAD/DEAH box RNA helicase family protein | chr5:3567389-3570686 FORWARD LENGTH=468)

HSP 1 Score: 68.1662 bits (165), Expect = 3.507e-12
Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = -3

Query:  198 MAQTPRDFTRREFRSGFFEFLITPALLPRGIYFPQVSLEINYDLPSQPENFFHPIGRSGLFGRKGVAINFV-PLDDARILFDIQKFSNVAVEEFPSNV 488
            M+Q  R    + F+ G    L+   L+ RGI   +V++ INYD+P   + + H +GR+G FG KG+AI FV    D+ +L  +Q+   V ++E P  +
Sbjct:  363 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 460

The following BLAST results are available for this feature:

BLAST of GR409528 vs. SwissProt
BLAST of GR409528 vs. TrEMBL
BLAST of GR409528 vs. TAIR peptide

BLAST of GR409528 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF4A2_ARATH	1.822e-33	70.09	Eukaryotic initiation factor 4A-2 OS=Arabidopsis t...	[more]
IF4A8_TOBAC	4.059e-33	69.16	Eukaryotic initiation factor 4A-8 OS=Nicotiana tab...	[more]
IF4A1_ORYSJ	9.042e-33	63.79	Eukaryotic initiation factor 4A-1 OS=Oryza sativa ...	[more]
IF4A1_ARATH	9.042e-33	69.16	Eukaryotic initiation factor 4A-1 OS=Arabidopsis t...	[more]
IF414_TOBAC	9.042e-33	68.22	Eukaryotic initiation factor 4A-14 OS=Nicotiana ta...	[more]
IF4A_MAIZE	2.014e-32	67.29	Eukaryotic initiation factor 4A OS=Zea mays PE=2 S...	[more]
IF4A3_ORYSJ	2.014e-32	67.29	Eukaryotic initiation factor 4A-3 OS=Oryza sativa ...	[more]
IF4A_WHEAT	2.631e-32	63.79	Eukaryotic initiation factor 4A OS=Triticum aestiv...	[more]
IF4A6_TOBAC	2.631e-32	63.48	Eukaryotic initiation factor 4A-6 (Fragment) OS=Ni...	[more]
IF411_TOBAC	3.436e-32	62.93	Eukaryotic initiation factor 4A-11 OS=Nicotiana ta...	[more]

BLAST of GR409528 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9P8S3_POPTR	2.463e-32	66.38	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9DHY5_ARATH	2.463e-32	70.09	AT1G54270 protein (Fragment) OS=Arabidopsis thalia...	[more]
A9PA53_POPTR	2.463e-32	66.38	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PD17_POPTR	7.167e-32	69.16	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7STP1_VITVI	9.361e-32	69.16	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BNE8_VITVI	9.361e-32	69.16	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C5Z8X0_SORBI	1.223e-31	68.22	Putative uncharacterized protein Sb10g028940 OS=So...	[more]
B9RK89_RICCO	1.223e-31	69.16	Dead box ATP-dependent RNA helicase, putative OS=R...	[more]
B7EPR0_ORYSJ	1.223e-31	63.79	cDNA clone:001-114-H08, full insert sequence OS=Or...	[more]
A8MRZ7_ARATH	1.223e-31	69.16	Uncharacterized protein At3g13920.3 OS=Arabidopsis...	[more]

BLAST of GR409528 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G54270.2	1.911e-34	70.09	\| Symbols: EIF4A-2 \| eif4a-2 \| chr1:20260495-20262...	[more]
AT1G54270.1	1.911e-34	70.09	\| Symbols: EIF4A-2 \| eif4a-2 \| chr1:20260495-20262...	[more]
AT3G13920.4	9.485e-34	69.16	\| Symbols: EIF4A1 \| eukaryotic translation initiat...	[more]
AT3G13920.3	9.485e-34	69.16	\| Symbols: EIF4A1, RH4, TIF4A1 \| eukaryotic transl...	[more]
AT3G13920.1	9.485e-34	69.16	\| Symbols: EIF4A1, RH4, TIF4A1 \| eukaryotic transl...	[more]
AT1G72730.1	1.978e-31	64.49	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT3G19760.1	8.048e-25	55.14	\| Symbols: EIF4A-III \| eukaryotic initiation facto...	[more]
AT3G13920.2	5.768e-23	64.71	\| Symbols: EIF4A1, RH4, TIF4A1 \| eukaryotic transl...	[more]
AT1G51380.1	4.004e-16	42.86	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT5G11200.3	3.507e-12	34.69	\| Symbols: \| DEAD/DEAH box RNA helicase family pr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 19..25 score
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 26..127 score: 5.3
None	No IPR available	PANTHER	PTHR10967	DEAD BOX ATP-DEPENDENT RNA HELICASE	coord: 26..129 score: 6.7
None	No IPR available	PANTHER	PTHR10967:SF2	EUKARYOTIC INITIATION FACTOR 4A	coord: 26..129 score: 6.7
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 26..124 score: 2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 25..86 score: 9.1
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 1..128 score: 13

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR409528 ID=GR409528; Name=GR409528; organism=Cicer arietinum; type=EST; length=571bp
CAGATCACAAAAAAAACCCCCTAATTAAGCAATTAAACAAAATTCATAGA
ATCCATTATAAATAGAGTCAGATGTCTTTGAACTCTAATGGGGAAAAATT
GCAAAAGAAGAGTAGGCATAAAATAGCACTTGGCATAAACTAAAAAGCCC
TGATGAATTAACAGAGAACAAAAATTAATTCCTCGGAGTAGATCAGCAAC
ATTTGAAGGGAACTCCTCTACGGCCACATTGGAAAACTTCTGAATATCAA
AAAGAATTCTTGCGTCATCCAAGGGGACAAAGTTTATTGCAACACCTTTT
CTACCAAAAAGACCACTTCGCCCTATGGGATGAAAAAAATTTTCAGGTTG
AGAAGGAAGATCATAGTTTATCTCCAAAGACACTTGTGGGAAATAAATAC
CACGGGGCAAAAGGGCAGGGGTAATGAGAAACTCAAAAAAACCTGAGCGA
AATTCTCGCCTGGTGAAATCCCGAGGGGTTTGGGCCATGTCTCCCTGGGG
GGGGGAAAAAATGGGGGACATTCCCCCCCATTTTGTCGGGGAAGCCAGTC
CCCCCTTTGGGCCCTGGGGGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C

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