GR410023

EST Overview
NameGR410023
Unique NameGR410023
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length512
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR410023 vs. TrEMBL
Match: C6T2K6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 8.764e-18
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = -3 
Query:  121 MADHARRRKAMRKQR-SIHANQQKTTQR-NINNDFVEIKDGDQDLDQILHQLFHSHDDLTGCLTAKAA 318
            MADH RRRKAM++QR ++H NQQK   R N  +DFVE  D D   D ILH LFH++ D    LTAKAA
Sbjct:   30 MADHERRRKAMKRQRGAMHTNQQKGIHRNNFESDFVEYGDLD---DVILHDLFHTYLD----LTAKAA 90

HSP 2 Score: 52.7582 bits (125), Expect = 8.764e-18
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = -2 
Query:  428 QSMLNLRATHGVPFCLSGITNPLALSKE 511
            QSMLNLRATHG+P CLSGIT+PLAL KE
Sbjct:    2 QSMLNLRATHGLPLCLSGITHPLALPKE 29
[Close]
BLAST of GR410023 vs. TrEMBL
Match: B9SK38_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1399730 PE=4 SV=1)

HSP 1 Score: 43.5134 bits (101), Expect = 9.087e-8
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = -3 
Query:  121 MADHARRRKAMRKQRS-----IHANQQKTTQRNINNDFVEIKDGDQDLDQILHQLFHSHDDLTGCLTAKAA 318
            M DH RRR+A++KQRS     +HANQ+    RN+      I++G+ D D     L     DL+   TAKAA
Sbjct:   30 MVDHDRRREAIKKQRSQARQGLHANQELAISRNLETVLENIQEGEVDED-----LASFLQDLSLFNTAKAA 95

HSP 2 Score: 36.5798 bits (83), Expect = 9.087e-8
Identity = 16/28 (57.14%), Postives = 22/28 (78.57%), Query Frame = -2 
Query:  428 QSMLNLRATHGVPFCLSGITNPLALSKE 511
            QSM+NL  ++G+P  +SGIT+ L LSKE
Sbjct:    2 QSMINLHGSYGLPLSVSGITHHLTLSKE 29
The following BLAST results are available for this feature:
BLAST of GR410023 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6T2K6_SOYBN8.764e-1857.35Putative uncharacterized protein OS=Glycine max PE... [more]
B9SK38_RICCO9.087e-840.85Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 40..52
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR410023 ID=GR410023; Name=GR410023; organism=Cicer arietinum; type=EST; length=512bp
GCACAAAGGGGTCCATTTTACATGATTAAATAAATTTAAGATATGTTTTT
ACATGTTACAACATAGTAATAACAATAATAAAAATAAAAATAAAAATAAA
AATCTCCAGAAAATTAATTAAGCAGCTTTTGCAGTTAAACAACCTGTGAG
GTCATCATGAGAATGGAACAATTGATGCAAGATTTGATCCAGATCTTGAT
CACCATCTTTGATCTCCACAAAATCATTATTAATGTTTCTTTGTGTAGTC
TTTTGTTGATTTGCATGTATTGATCTTTGCTTTCTCATGGCCTTTCTTCT
ACGGGCATGATCTGCCATCCTAAACCGCCAAATTAAAACATACTAGTATA
AGATTAGAGAATAAGATAAATAAATAAATCATAAATCAAAAAGAGAGGGG
GGGGGGGGGGGTGCAAATTAGTAATTACTCTTTGGAAAGAGCAAGAGGGT
TGGTGATTCCGGAAAGACAGAAAGGAACACCATGGGTTGCACGCAGGTTT
AACATGGACTGC
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