GR420459

EST Overview
NameGR420459
Unique NameGR420459
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length783
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR420459 vs. SwissProt
Match: PSD31_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 3a OS=Arabidopsis thaliana GN=EMB2719 PE=1 SV=3)

HSP 1 Score: 55.0694 bits (131), Expect = 1.312e-10
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 252          

HSP 2 Score: 26.1794 bits (56), Expect = 1.312e-10
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAKA SSAS+A L
Sbjct:  134 KYNEAKACSSASIARL 149          

HSP 3 Score: 25.0238 bits (53), Expect = 1.312e-10
Identity = 22/60 (36.67%), Postives = 23/60 (38.33%), Query Frame = 1
Query:  283 RTVDVII--------------GDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            RT+DVI               GDLAEIRG L                     DELGQETL
Sbjct:  155 RTIDVIASRLYFYYSLSYEQTGDLAEIRGTL----------LALHHSATLRHDELGQETL 204          
BLAST of GR420459 vs. SwissProt
Match: PSMD3_TOBAC (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum GN=21D7 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.694e-10
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFSRYLFYLGKIRTI 252          

HSP 2 Score: 26.1794 bits (56), Expect = 1.694e-10
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAKA SSAS+A L
Sbjct:  134 KYNEAKACSSASIARL 149          

HSP 3 Score: 24.6386 bits (52), Expect = 1.694e-10
Identity = 22/60 (36.67%), Postives = 25/60 (41.67%), Query Frame = 1
Query:  241 ASRLFFLLFI*P*TRTVDVIIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            ASRL+F   +         + GDLAEIRG L                     DELGQETL
Sbjct:  161 ASRLYFYYSL------CYELTGDLAEIRGYL----------LALHRIATLRHDELGQETL 204          
BLAST of GR420459 vs. SwissProt
Match: PSMD3_DAUCA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota GN=21D7 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.743e-9
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  215 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 253          

HSP 2 Score: 28.1054 bits (61), Expect = 1.743e-9
Identity = 37/125 (29.60%), Postives = 48/125 (38.40%), Query Frame = 1
Query:   91 EMEVDAATSVTLTA*ARNLSD*AC-------------ATFSEKR--TSTDTMRPKLFPQLVLLG*ASRLFFLLFI*P*TRTVDVIIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            +MEVD A S T T    +L +                  +SE +  +S    R K   +  +   ASRL+F   +         + GDLAEIRGNL                     DELGQETL
Sbjct:   97 DMEVDTAMSATTTLAKHSLPELEIYCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSL------SYELTGDLAEIRGNL----------LALHRIATLRHDELGQETL 205          
BLAST of GR420459 vs. SwissProt
Match: PSD32_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 3b OS=Arabidopsis thaliana GN=At1g75990 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 5.265e-7
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  213 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 251          
BLAST of GR420459 vs. TrEMBL
Match: B9H1J7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648811 PE=4 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.223e-9
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 252          

HSP 2 Score: 27.335 bits (59), Expect = 1.223e-9
Identity = 18/41 (43.90%), Postives = 19/41 (46.34%), Query Frame = 1
Query:  298 IIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            + GDLAEIRGNL                     DELGQETL
Sbjct:  174 LTGDLAEIRGNL----------LALHRVATLRHDELGQETL 204          

HSP 3 Score: 24.6386 bits (52), Expect = 1.223e-9
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAK  SSAS+A L
Sbjct:  134 KYNEAKTCSSASIARL 149          
BLAST of GR420459 vs. TrEMBL
Match: B9S5K6_RICCO (26S proteasome regulatory subunit S3, putative OS=Ricinus communis GN=RCOM_0977830 PE=4 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.038e-9
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  217 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 255          

HSP 2 Score: 27.335 bits (59), Expect = 2.038e-9
Identity = 18/41 (43.90%), Postives = 19/41 (46.34%), Query Frame = 1
Query:  298 IIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            + GDLAEIRGNL                     DELGQETL
Sbjct:  177 LTGDLAEIRGNL----------LALHRIATLRHDELGQETL 207          

HSP 3 Score: 23.8682 bits (50), Expect = 2.038e-9
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 3
Query:  153 LSLCYFFRKKNINRYNEAKAVSSASVAWL 239
            L L Y   +K   +YNEAKA S+A +A L
Sbjct:  127 LVLIYLIDQK---KYNEAKACSTACIARL 152          
BLAST of GR420459 vs. TrEMBL
Match: Q6EMB6_ARATH (26S proteasome subunit RPN3a OS=Arabidopsis thaliana GN=RPN3a PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.039e-9
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 252          

HSP 2 Score: 26.1794 bits (56), Expect = 2.039e-9
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAKA SSAS+A L
Sbjct:  134 KYNEAKACSSASIARL 149          

HSP 3 Score: 25.0238 bits (53), Expect = 2.039e-9
Identity = 22/60 (36.67%), Postives = 23/60 (38.33%), Query Frame = 1
Query:  283 RTVDVII--------------GDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            RT+DVI               GDLAEIRG L                     DELGQETL
Sbjct:  155 RTIDVIASRLYFYYSLSYEQTGDLAEIRGTL----------LALHHSATLRHDELGQETL 204          
BLAST of GR420459 vs. TrEMBL
Match: D7KIA4_ARALY (EMB2719 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472250 PE=4 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.039e-9
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 252          

HSP 2 Score: 26.1794 bits (56), Expect = 2.039e-9
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAKA SSAS+A L
Sbjct:  134 KYNEAKACSSASIARL 149          

HSP 3 Score: 25.0238 bits (53), Expect = 2.039e-9
Identity = 22/60 (36.67%), Postives = 23/60 (38.33%), Query Frame = 1
Query:  283 RTVDVII--------------GDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            RT+DVI               GDLAEIRG L                     DELGQETL
Sbjct:  155 RTIDVIASRLYFYYSLSYEQTGDLAEIRGTL----------LALHHSATLRHDELGQETL 204          
BLAST of GR420459 vs. TrEMBL
Match: Q93ZI2_ARATH (At1g20200/T20H2_4 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.072e-9
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 252          

HSP 2 Score: 26.1794 bits (56), Expect = 2.072e-9
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAKA SSAS+A L
Sbjct:  134 KYNEAKACSSASIARL 149          

HSP 3 Score: 25.0238 bits (53), Expect = 2.072e-9
Identity = 22/60 (36.67%), Postives = 23/60 (38.33%), Query Frame = 1
Query:  283 RTVDVII--------------GDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            RT+DVI               GDLAEIRG L                     DELGQETL
Sbjct:  155 RTIDVIASRLYFYYSLSYEQTGDLAEIRGTL----------LALHHSATLRHDELGQETL 204          
BLAST of GR420459 vs. TrEMBL
Match: D7U535_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024003001 PE=4 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.224e-8
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  213 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 251          

HSP 2 Score: 27.335 bits (59), Expect = 1.224e-8
Identity = 18/41 (43.90%), Postives = 19/41 (46.34%), Query Frame = 1
Query:  298 IIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            + GDLAEIRGNL                     DELGQETL
Sbjct:  173 LTGDLAEIRGNL----------LALHRIATLRHDELGQETL 203          

HSP 3 Score: 21.1718 bits (43), Expect = 1.224e-8
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +Y EAKA S+AS+  L
Sbjct:  133 KYKEAKACSAASITRL 148          
BLAST of GR420459 vs. TrEMBL
Match: B9HR39_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_721661 PE=4 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.597e-8
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  212 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 250          

HSP 2 Score: 25.409 bits (54), Expect = 5.597e-8
Identity = 17/41 (41.46%), Postives = 19/41 (46.34%), Query Frame = 1
Query:  298 IIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            + GDLAEIRG+L                     DELGQETL
Sbjct:  172 LTGDLAEIRGSL----------LALHRIATLRHDELGQETL 202          

HSP 3 Score: 20.7866 bits (42), Expect = 5.597e-8
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            ++ EAKA SSAS+A L
Sbjct:  132 KHIEAKACSSASIARL 147          
BLAST of GR420459 vs. TrEMBL
Match: B9R8E7_RICCO (26S proteasome regulatory subunit S3, putative OS=Ricinus communis GN=RCOM_1599350 PE=4 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 6.084e-7
Identity = 28/39 (71.79%), Postives = 29/39 (74.36%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LG IRTI
Sbjct:  217 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGNIRTI 255          

HSP 2 Score: 25.409 bits (54), Expect = 6.084e-7
Identity = 33/125 (26.40%), Postives = 48/125 (38.40%), Query Frame = 1
Query:   91 EMEVDAATSVTLTA*ARNLSD*ACATF---------------SEKRTSTDTMRPKLFPQLVLLG*ASRLFFLLFI*P*TRTVDVIIGDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            +MEVD+ATS T T     L +     +               ++  +S    R K   +  +   ASRL+F          +  + G+LA+IRG+L                     DELGQETL
Sbjct:   99 DMEVDSATSATRTPPKHTLPELEIYCYLLVLLFLIDRKKYNEAKACSSASIARIKNLNRRTVYVLASRLYFYY------SYIYELTGNLADIRGDL----------LALHRIATLRHDELGQETL 207          
BLAST of GR420459 vs. TAIR peptide
Match: AT1G20200.1 (| Symbols: EMB2719, HAP15 | PAM domain (PCI/PINT associated module) protein | chr1:7001409-7004154 REVERSE LENGTH=488)

HSP 1 Score: 55.0694 bits (131), Expect = 1.297e-11
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  214 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 252          

HSP 2 Score: 26.1794 bits (56), Expect = 1.297e-11
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  192 RYNEAKAVSSASVAWL 239
            +YNEAKA SSAS+A L
Sbjct:  134 KYNEAKACSSASIARL 149          

HSP 3 Score: 25.0238 bits (53), Expect = 1.297e-11
Identity = 22/60 (36.67%), Postives = 23/60 (38.33%), Query Frame = 1
Query:  283 RTVDVII--------------GDLAEIRGNLAXXXXXXXXXXXXXXXXXXXXDELGQETL 420
            RT+DVI               GDLAEIRG L                     DELGQETL
Sbjct:  155 RTIDVIASRLYFYYSLSYEQTGDLAEIRGTL----------LALHHSATLRHDELGQETL 204          
BLAST of GR420459 vs. TAIR peptide
Match: AT1G75990.1 (| Symbols: | PAM domain (PCI/PINT associated module) protein | chr1:28524623-28526718 REVERSE LENGTH=487)

HSP 1 Score: 55.0694 bits (131), Expect = 5.245e-8
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  420 YYNLYDQAEKLRSKAPRFEAHSN---------LGKIRTI 509
            +YNLYDQAEKLRSKAPRFEAHSN         LGKIRTI
Sbjct:  213 HYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTI 251          
The following BLAST results are available for this feature:
BLAST of GR420459 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
PSD31_ARATH1.312e-1074.36Probable 26S proteasome non-ATPase regulatory subu... [more]
PSMD3_TOBAC1.694e-1074.36Probable 26S proteasome non-ATPase regulatory subu... [more]
PSMD3_DAUCA1.743e-974.36Probable 26S proteasome non-ATPase regulatory subu... [more]
PSD32_ARATH5.265e-774.36Probable 26S proteasome non-ATPase regulatory subu... [more]
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BLAST of GR420459 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9H1J7_POPTR1.223e-974.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S5K6_RICCO2.038e-974.3626S proteasome regulatory subunit S3, putative OS=... [more]
Q6EMB6_ARATH2.039e-974.3626S proteasome subunit RPN3a OS=Arabidopsis thalia... [more]
D7KIA4_ARALY2.039e-974.36EMB2719 OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
Q93ZI2_ARATH2.072e-974.36At1g20200/T20H2_4 OS=Arabidopsis thaliana PE=2 SV=... [more]
D7U535_VITVI1.224e-874.36Whole genome shotgun sequence of line PN40024, sca... [more]
B9HR39_POPTR5.597e-874.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R8E7_RICCO6.084e-771.7926S proteasome regulatory subunit S3, putative OS=... [more]
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BLAST of GR420459 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G20200.11.297e-1174.36| Symbols: EMB2719, HAP15 | PAM domain (PCI/PINT a... [more]
AT1G75990.15.245e-874.36| Symbols: | PAM domain (PCI/PINT associated modu... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..39
score
NoneNo IPR availableSEGsegsegcoord: 19..36
score
NoneNo IPR availableSEGsegsegcoord: 38..57
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420459 ID=GR420459; Name=GR420459; organism=Cicer arietinum; type=EST; length=783bp
CCAAGGAGGAGGATCACACTGAACCCCATACCAAATTGTCTGCGTCCTGG
TTCTATCTTCTTGCCATTCAAACCCCTGTGGCTAAACATTGAGATGGAGG
TAGATGCCGCAACGTCTGTTACTCTTACCGCCTGAGCTAGAAATCTTTCT
GATTGAGCTTGTGCTACTTTTTCAGAAAAAAGAACATCAACAGATACAAT
GAGGCCAAAGCTGTTTCCTCAGCTAGTGTTGCTTGGCTGAGCATCTAGGC
TGTTTTTTTTACTATTCATATAGCCATGAACAAGAACTGTTGATGTGATT
ATTGGGGATCTAGCTGAAATTCGCGGCAACCTCGCCACACTTACCCTTGC
ATTGCACCGGTGCCTTAATTTGTTACTTCGAAACTATCTTCGCCATGATG
AGTTGGGTCAGGAAACCCTTACTACAACCTATATGATCAGGCAGAGAAGT
TGAGGTCAAAGGCTCCACGATTTGAAGCACATTCAAACCTCGGGAAAATC
AGGACAATCCCCAGCAGTTCTGTCGTTATCTCTTCTAAATCTACTGCAGG
CTGCTCTGGCTCCAGTTGGAGTATACAGATGCAAAAGAGTCTGTAAGCAG
CAAGTGGGCTATCATAGTGTGCTGTTGGCGTCGGGGTTTTCGAATTCAAT
GTAACATGAGGCAGAAAGGAATGGAGAAAGCGCTGAGCCTTACTTAAATA
CCTGAGCGAACTGTCTTTATCTGTCCGGATTGGAGACTTGGAGTGAGCTT
ACAAATGCTGTTTAGATATTGCAGATAGTTTGC
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