GR911856

EST Overview


Name	GR911856
Unique Name	GR911856
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	449

Libraries


Library Name	Type
LIBEST_024968 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. JG-62) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR911856 vs. SwissProt
Match: RS4_MAIZE (40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 2.814e-60
Identity = 108/117 (92.31%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RN+LKYALTYREVI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RD+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS43_ARATH (40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 4.801e-60
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS42_ARATH (40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4)

HSP 1 Score: 229.565 bits (584), Expect = 4.801e-60
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS41_ARATH (40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 4.801e-60
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS4_SOLTU (40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.397e-59
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RN+LKYALTYREVI+ILMQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS4_ORYSJ (40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 5.308e-59
Identity = 107/117 (91.45%), Postives = 114/117 (97.44%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RN+LKYALTYREVI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL SV+D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS4_GOSHI (40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.017e-58
Identity = 107/117 (91.45%), Postives = 113/117 (96.58%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH++  D
Sbjct:    1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGD 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS4_PRUAR (40S ribosomal protein S4 OS=Prunus armeniaca GN=RPS4 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 6.284e-52
Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREV++ILMQRH+LVD K+     +     DVVSIPKTNENFRLLYDTKGRFRLHS+RD+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDE 113

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS4_YEAST (40S ribosomal protein S4 OS=Saccharomyces cerevisiae GN=RPS4A PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 9.718e-45
Identity = 84/117 (71.79%), Postives = 97/117 (82.91%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRN+LKYAL  REV AILMQRHV VD KVRTD TYPAGFMDV+++  TNENFRL+YD KGRF +H + D+
Sbjct:    1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDE 117

[Close]

BLAST of GR911856 vs. SwissProt
Match: RS4_BOMMO (40S ribosomal protein S4 OS=Bombyx mori GN=RpS4 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 9.718e-45
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSV 440
            MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRN+LKYALT  EV+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H +
Sbjct:    1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRI 114

[Close]

BLAST of GR911856 vs. TrEMBL
Match: Q8LJW0_SOYBN (40S ribosomal S4 protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 2.983e-61
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: B9RPJ9_RICCO (40S ribosomal protein S4, putative OS=Ricinus communis GN=RCOM_1378650 PE=4 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 6.645e-61
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: B9RG48_RICCO (40S ribosomal protein S4, putative OS=Ricinus communis GN=RCOM_1439050 PE=4 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 6.645e-61
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: C6SZ83_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 8.679e-61
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRD+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDE 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: B7FL29_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.134e-60
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLHSVRDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: C6TN03_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.934e-60
Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKK+LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDD
Sbjct:    1 MARGLKKYLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: B3TM23_ELAGV (40S ribosomal protein S4 OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.525e-60
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDE 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: C6TNY3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.298e-60
Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMD VSIPKTNENF LLYDTKGRFRLHSVRDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: B9N3A7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837007 PE=4 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 5.626e-60
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDD 117

[Close]

BLAST of GR911856 vs. TrEMBL
Match: B9HCZ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831930 PE=4 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 5.626e-60
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYREVIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RDD
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDD 117

[Close]

BLAST of GR911856 vs. TAIR peptide
Match: AT5G07090.1 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr5:2202410-2203805 FORWARD LENGTH=262)

HSP 1 Score: 229.565 bits (584), Expect = 5.688e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. TAIR peptide
Match: AT5G58420.1 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr5:23619599-23620896 FORWARD LENGTH=262)

HSP 1 Score: 229.565 bits (584), Expect = 5.688e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. TAIR peptide
Match: AT2G17360.2 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr2:7546598-7548041 FORWARD LENGTH=184)

HSP 1 Score: 229.565 bits (584), Expect = 5.688e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. TAIR peptide
Match: AT2G17360.1 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr2:7546598-7548138 FORWARD LENGTH=261)

HSP 1 Score: 229.565 bits (584), Expect = 5.688e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 3

Query:   99 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 117

[Close]

BLAST of GR911856 vs. TAIR peptide
Match: AT5G07090.2 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr5:2202783-2203805 FORWARD LENGTH=244)

HSP 1 Score: 190.66 bits (483), Expect = 2.928e-49
Identity = 89/99 (89.90%), Postives = 97/99 (97.98%), Query Frame = 3

Query:  153 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYREVIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDD 449
            MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RN+LKYALTYREVI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+
Sbjct:    1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDE 99

The following BLAST results are available for this feature:

BLAST of GR911856 vs. SwissProt
BLAST of GR911856 vs. TrEMBL
BLAST of GR911856 vs. TAIR peptide

BLAST of GR911856 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS4_MAIZE	2.814e-60	92.31	40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 ...	[more]
RS43_ARATH	4.801e-60	91.45	40S ribosomal protein S4-3 OS=Arabidopsis thaliana...	[more]
RS42_ARATH	4.801e-60	91.45	40S ribosomal protein S4-2 OS=Arabidopsis thaliana...	[more]
RS41_ARATH	4.801e-60	91.45	40S ribosomal protein S4-1 OS=Arabidopsis thaliana...	[more]
RS4_SOLTU	1.397e-59	91.45	40S ribosomal protein S4 OS=Solanum tuberosum GN=R...	[more]
RS4_ORYSJ	5.308e-59	91.45	40S ribosomal protein S4 OS=Oryza sativa subsp. ja...	[more]
RS4_GOSHI	2.017e-58	91.45	40S ribosomal protein S4 OS=Gossypium hirsutum GN=...	[more]
RS4_PRUAR	6.284e-52	83.76	40S ribosomal protein S4 OS=Prunus armeniaca GN=RP...	[more]
RS4_YEAST	9.718e-45	71.79	40S ribosomal protein S4 OS=Saccharomyces cerevisi...	[more]
RS4_BOMMO	9.718e-45	73.68	40S ribosomal protein S4 OS=Bombyx mori GN=RpS4 PE...	[more]

BLAST of GR911856 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8LJW0_SOYBN	2.983e-61	98.29	40S ribosomal S4 protein OS=Glycine max PE=2 SV=1	[more]
B9RPJ9_RICCO	6.645e-61	97.44	40S ribosomal protein S4, putative OS=Ricinus comm...	[more]
B9RG48_RICCO	6.645e-61	97.44	40S ribosomal protein S4, putative OS=Ricinus comm...	[more]
C6SZ83_SOYBN	8.679e-61	97.44	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FL29_MEDTR	1.134e-60	97.44	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TN03_SOYBN	1.934e-60	96.58	Putative uncharacterized protein OS=Glycine max PE...	[more]
B3TM23_ELAGV	2.525e-60	95.73	40S ribosomal protein S4 OS=Elaeis guineensis var....	[more]
C6TNY3_SOYBN	3.298e-60	96.58	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9N3A7_POPTR	5.626e-60	95.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HCZ8_POPTR	5.626e-60	95.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of GR911856 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G07090.1	5.688e-61	91.45	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT5G58420.1	5.688e-61	91.45	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT2G17360.2	5.688e-61	91.45	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT2G17360.1	5.688e-61	91.45	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT5G07090.2	2.928e-49	89.90	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 32..147 score: 4.8
IPR002942	RNA-binding S4	PFAM	PF01479	S4	coord: 77..120 score: 7.6
IPR002942	RNA-binding S4	SMART	SM00363	no description	coord: 72..136 score: 5.6
IPR002942	RNA-binding S4	PROFILE	PS50889	S4	coord: 72..134 score: 8
IPR013843	Ribosomal protein S4e, N-terminal	PFAM	PF08071	RS4NT	coord: 33..70 score: 3.2
IPR018199	Ribosomal protein S4e, N-terminal, conserved site	PROSITE	PS00528	RIBOSOMAL_S4E	coord: 38..52 score
None	No IPR available	SEG	seg	seg	coord: 22..31 score: NAcoord: 107..124 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR911856 ID=GR911856; Name=GR911856; organism=Cicer arietinum; type=EST; length=449bp
ACTAGTGATTTCGAGCGGCCGCCCGGGCAGGTCGCACACAGCGATCAAGA
CTCAAGAGGCGCAGCAACTTTGCTCGTCTCTTTTTACAATTCGCAAACAT
GGCAAGAGGGTTGAAGAAACATTTGAAGAGGCTCAATGCTCCAAAACATT
GGATGCTTGATAAGCTTGGCGGTGCCTTTGCACCAAAGCCATCATCTGGA
CCACACAAATCAAGGGAGTGCCTGCCTTTGATTCTTATCCTGCGAAACAA
ACTAAAATATGCTCTCACATATAGAGAAGTAATTGCCATCTTAATGCAGC
GCCATGTTTTAGTTGATAACAAAGTTAGGACAGATAAGACATATCCTGCT
GGTTTTATGGATGTCGTGTCTATCCCCAAGACTAATGAAAATTTCCGTCT
TCTCTATGACACAAAGGGTCGATTCCGTCTCCACTCTGTAAGGGATGAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000876	Ribosomal_eS4
IPR002942	S4_RNA-bd
IPR013843	Ribosomal_eS4_N
IPR018199	Ribosomal_S4e_N_CS

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