HO062422

EST Overview


Name	HO062422
Unique Name	HO062422
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	711

Libraries


Library Name	Type
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO062422 vs. SwissProt
Match: RL7_LIBAF (50S ribosomal protein L7/L12 OS=Liberibacter africanus GN=rplL PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.997e-7
Identity = 29/41 (70.73%), Postives = 30/41 (73.17%), Query Frame = -2

Query:    6 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 128
            T F+V LE FDA  KI VIKEVRA T LGLKEAKD VE  P
Sbjct:   56 TEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAP 96

[Close]

BLAST of HO062422 vs. SwissProt
Match: RL7_SYNR3 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain RCC307) GN=rplL PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.608e-7
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -2

Query:    6 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 128
            T FDV LE FDAAAKIKV+K VR  T LGL +AK LVEK P
Sbjct:   61 TEFDVILESFDAAAKIKVLKAVREATGLGLADAKGLVEKAP 101

[Close]

BLAST of HO062422 vs. SwissProt
Match: RL7_PROM4 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplL PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.449e-7
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -2

Query:    6 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 128
            T FDV LE FDAAAKIKV+KEVR  T LGL EAK +VE  P
Sbjct:   63 TEFDVILESFDAAAKIKVLKEVRNATGLGLGEAKAMVEAAP 103

[Close]

BLAST of HO062422 vs. SwissProt
Match: RL7_LIBAC (50S ribosomal protein L7/L12 OS=Liberibacter africanus subsp. capensis GN=rplL PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 7.588e-7
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = -2

Query:   15 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVE 128
            T F+V LE FDA +KI VIKEVR+ T+LGLKEAK+LVE
Sbjct:   55 TEFEVFLESFDAKSKISVIKEVRSITDLGLKEAKELVE 92

[Close]

BLAST of HO062422 vs. TrEMBL
Match: C6SZ68_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.372e-50
Identity = 113/163 (69.33%), Postives = 122/163 (74.85%), Query Frame = -2

Query:    6 MRIITLSRYICHLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDL-XXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 491
            MR + LSR I  L R     P QSRA Q D V +D +AKPIKYKIPQ Y+PY PR PPS+KIVQLAE+I ALSEEERG IMP L+ERLKLPKLQPIST+GMD+                  KTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP
Sbjct:    1 MRFMPLSRLIFRLPRHYTHGPLQSRALQTDSVLKDPQAKPIKYKIPQFYDPYGPRPPPSEKIVQLAEQIEALSEEERGQIMPTLSERLKLPKLQPISTDGMDMGTEGGGAAGLKVEEKKAEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 163

[Close]

BLAST of HO062422 vs. TrEMBL
Match: B9IES3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_733326 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.087e-40
Identity = 100/166 (60.24%), Postives = 109/166 (65.66%), Query Frame = -2

Query:    6 MRIITLSRYIC--HLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDL--XXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 491
            M+ I L+R +C  H        P Q R FQ D V RD K KP KYK P  Y+PY PR PPS+KI+++AERI AL  EER  I  AL  +LK PKLQPISTEGM L                   KTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP
Sbjct:    1 MKFIALARSVCAHHPALREITGPLQVRYFQHDFVPRDPKTKPKKYKYPLYYDPYGPRPPPSEKIIEIAERIAALPPEERSQIGSALGYKLKHPKLQPISTEGMGLGSQGGEAAAGAAKVEEKKEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 166

[Close]

BLAST of HO062422 vs. TrEMBL
Match: Q3HVP5_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.420e-40
Identity = 100/166 (60.24%), Postives = 112/166 (67.47%), Query Frame = -2

Query:    3 MRIITLSRYICHLTRPRAFV-PFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDL--XXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 491
            M++I   R I   T  R  + P QSR+FQPD V RD  AKPI+YK P  Y+PY PR PPSDKIVQLAERI AL+ EER  I P L E L+ P L+ IS EGMDL                   KTAFDVKLEKFDAAAKIKVIKEVR+FT+LGLKEAK+LVEK PA
Sbjct:    1 MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILRHPNLKQISVEGMDLGAIGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKELVEKAPA 166

[Close]

BLAST of HO062422 vs. TrEMBL
Match: B9RB19_RICCO (50S ribosomal protein L7/L12, putative OS=Ricinus communis GN=RCOM_1510530 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.498e-39
Identity = 96/144 (66.67%), Postives = 98/144 (68.06%), Query Frame = -2

Query:    3 PFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDL-XXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 431
            P Q R FQ D V RD K  P KYK P  Y+PY PR PPSDKIVQLAERI AL  EER  I P L  +L  PKLQ ISTEGMDL                  KTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEK PA
Sbjct:   22 PLQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPSDKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEKKEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPA 165

[Close]

BLAST of HO062422 vs. TrEMBL
Match: Q9M7T1_ARATH (Putative uncharacterized protein At3g06040 OS=Arabidopsis thaliana GN=At3g06040 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.090e-32
Identity = 90/164 (54.88%), Postives = 106/164 (64.63%), Query Frame = -2

Query:    3 MRIITLSRYI-CHLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 491
            M++I+L R +     +P      Q R  Q D VS   KAKP KYK P VY+PY PR  PS KI++LAERI ALS EER  I PAL E L+LPK Q IS++G+                   KTAFDVKLEKF+A+ KIKVIKEVR FT+LGLKEAK+LVEKVPA
Sbjct:    1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPSSKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGI---GAKQDTGAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPA 158

[Close]

BLAST of HO062422 vs. TrEMBL
Match: D7L4R6_ARALY (Ribosomal protein L12 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477903 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.064e-32
Identity = 89/164 (54.27%), Postives = 106/164 (64.63%), Query Frame = -2

Query:    3 MRIITLSRYI-CHLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 491
            M++I+L R +     +P      Q R  Q D VS   KAKP KYK P VY+PY PR  PS+KI++LAE I ALS EER  I PAL E L+LPK Q IS++G+                   KTAFDVKLEKF+A+ KIKVIKEVR FT+LGLKEAK+LVEKVPA
Sbjct:    1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPSNKIMELAECIAALSPEERKQIGPALNEHLRLPKQQMISSDGI---GAKQDTGAGKVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPA 158

[Close]

BLAST of HO062422 vs. TrEMBL
Match: Q6H730_ORYSJ (Os02g0198900 protein OS=Oryza sativa subsp. japonica GN=P0026H03.23 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.290e-25
Identity = 71/133 (53.38%), Postives = 83/133 (62.41%), Query Frame = -2

Query:    6 SRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXK---TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 395
            ++D+ AK  KYK P+VY+PY P  PPS K+V LA+RI AL  EE   I PAL  RL  P  Q IS +G                    K   T FDVKLEKFDAAAKIK+IKE+R FT+LGLKEAK+LVEK P
Sbjct:   34 AKDTGAK--KYKYPEVYDPYGPMSPPSQKVVDLADRIAALPPEEIKQIAPALLLRLNQPPPQAISGQGFSFSPQGGGGAAGAAKAEEKKAEKTVFDVKLEKFDAAAKIKIIKEIRTFTDLGLKEAKELVEKAP 164

[Close]

BLAST of HO062422 vs. TrEMBL
Match: A2X232_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06257 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.290e-25
Identity = 71/133 (53.38%), Postives = 83/133 (62.41%), Query Frame = -2

Query:    6 SRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXK---TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 395
            ++D+ AK  KYK P+VY+PY P  PPS K+V LA+RI AL  EE   I PAL  RL  P  Q IS +G                    K   T FDVKLEKFDAAAKIK+IKE+R FT+LGLKEAK+LVEK P
Sbjct:   34 AKDTGAK--KYKYPEVYDPYGPMSPPSQKVVDLADRIAALPPEEIKQIAPALLLRLNQPPPQAISGQGFSFSPQGGGGAAGAAKAEEKKAEKTVFDVKLEKFDAAAKIKIIKEIRTFTDLGLKEAKELVEKAP 164

[Close]

BLAST of HO062422 vs. TrEMBL
Match: B6TJY8_MAIZE (60S ribosomal protein L7/L12 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.863e-24
Identity = 73/165 (44.24%), Postives = 96/165 (58.18%), Query Frame = -2

Query:    6 MRIITLSRYICHLTRPRAFVPFQS--RAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXK-TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 491
            M + T++R +C L++P +     +          ++D  AK  KYK P VY+PY P  PPS+K+V+LA+RI AL  EE   I PAL  RL     Q +S +G                    + T FDV+LEKFDAAAKIK+IKE+R FT+LGLKEAK+LVEK P
Sbjct:    1 MSLCTIARRLC-LSKPSSGSRLSAIWAHLYSTEAAKDMGAK--KYKYPDVYDPYGPMPPPSEKVVELADRIAALPPEEIKQIAPALLLRLNQEPPQAVSGQGFGFGAQVGSGAGSGKAEKKAEKTVFDVRLEKFDAAAKIKIIKEIRTFTDLGLKEAKELVEKAP 162

[Close]

BLAST of HO062422 vs. TrEMBL
Match: B4FBL2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.863e-24
Identity = 73/165 (44.24%), Postives = 96/165 (58.18%), Query Frame = -2

Query:    6 MRIITLSRYICHLTRPRAFVPFQS--RAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXK-TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 491
            M + T++R +C L++P +     +          ++D  AK  KYK P VY+PY P  PPS+K+V+LA+RI AL  EE   I PAL  RL     Q +S +G                    + T FDV+LEKFDAAAKIK+IKE+R FT+LGLKEAK+LVEK P
Sbjct:    1 MSLCTIARRLC-LSKPSSGSRLSAIWAHLYSTEAAKDMGAK--KYKYPDVYDPYGPMPPPSEKVVELADRIAALPPEEIKQIAPALLLRLNQEPPQAVSGQGFGFGAQVGSGAGSGKAEKKAEKTVFDVRLEKFDAAAKIKIIKEIRTFTDLGLKEAKELVEKAP 162

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT3G06040.3 (| Symbols: | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein | chr3:1824516-1825076 REVERSE LENGTH=186)

HSP 1 Score: 144.05 bits (362), Expect = 7.390e-35
Identity = 90/164 (54.88%), Postives = 106/164 (64.63%), Query Frame = -2

Query:    3 MRIITLSRYI-CHLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 491
            M++I+L R +     +P      Q R  Q D VS   KAKP KYK P VY+PY PR  PS KI++LAERI ALS EER  I PAL E L+LPK Q IS++G+                   KTAFDVKLEKF+A+ KIKVIKEVR FT+LGLKEAK+LVEKVPA
Sbjct:    1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPSSKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGI---GAKQDTGAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPA 158

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT3G06040.2 (| Symbols: | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein | chr3:1824516-1825076 REVERSE LENGTH=186)

HSP 1 Score: 144.05 bits (362), Expect = 7.390e-35
Identity = 90/164 (54.88%), Postives = 106/164 (64.63%), Query Frame = -2

Query:    3 MRIITLSRYI-CHLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 491
            M++I+L R +     +P      Q R  Q D VS   KAKP KYK P VY+PY PR  PS KI++LAERI ALS EER  I PAL E L+LPK Q IS++G+                   KTAFDVKLEKF+A+ KIKVIKEVR FT+LGLKEAK+LVEKVPA
Sbjct:    1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPSSKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGI---GAKQDTGAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPA 158

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT3G06040.1 (| Symbols: | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein | chr3:1824516-1825076 REVERSE LENGTH=186)

HSP 1 Score: 144.05 bits (362), Expect = 7.390e-35
Identity = 90/164 (54.88%), Postives = 106/164 (64.63%), Query Frame = -2

Query:    3 MRIITLSRYI-CHLTRPRAFVPFQSRAFQPDVVSRDSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTEGMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 491
            M++I+L R +     +P      Q R  Q D VS   KAKP KYK P VY+PY PR  PS KI++LAERI ALS EER  I PAL E L+LPK Q IS++G+                   KTAFDVKLEKF+A+ KIKVIKEVR FT+LGLKEAK+LVEKVPA
Sbjct:    1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPSSKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGI---GAKQDTGAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPA 158

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT1G70190.2 (| Symbols: | Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like | chr1:26430616-26431242 FORWARD LENGTH=208)

HSP 1 Score: 74.7146 bits (182), Expect = 5.506e-14
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = -2

Query:    3 DSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTE--------GMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 389
            D +  P  Y  P  ++P + R PP+D++ +L + I +L+  E   +   + ++  + +L  ++          G+                   KT F++KLE F+A+AKIK+IKE+R+FT+LGLKEAK LVEK PA
Sbjct:   45 DQRKLPTDYD-PATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPGAGGGVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKALVEKTPA 180

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT1G70190.1 (| Symbols: | Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like | chr1:26430616-26431242 FORWARD LENGTH=208)

HSP 1 Score: 74.7146 bits (182), Expect = 5.506e-14
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = -2

Query:    3 DSKAKPIKYKIPQVYNPYDPRLPPSDKIVQLAERIGALSEEERGLIMPALAERLKLPKLQPISTE--------GMDLXXXXXXXXXXXXXXXXXKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPA 389
            D +  P  Y  P  ++P + R PP+D++ +L + I +L+  E   +   + ++  + +L  ++          G+                   KT F++KLE F+A+AKIK+IKE+R+FT+LGLKEAK LVEK PA
Sbjct:   45 DQRKLPTDYD-PATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPGAGGGVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKALVEKTPA 180

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT4G37660.1 (| Symbols: | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein | chr4:17695543-17696046 FORWARD LENGTH=167)

HSP 1 Score: 69.707 bits (169), Expect = 1.771e-12
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = -2

Query:    6 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 128
            T FDVKLEKF+AA+KIKVIKE+RAFT+LGLKEAK LVEK P
Sbjct:   98 TTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAP 138

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT4G36420.1 (| Symbols: | Ribosomal protein L12 family protein | chr4:17203718-17204257 REVERSE LENGTH=179)

HSP 1 Score: 62.7734 bits (151), Expect = 2.165e-10
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = -2

Query:    6 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 128
            TAFDV L+ +DA +KIKVIKEVR  T LGLKEAKDLVEK P
Sbjct:  110 TAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDLVEKAP 150

[Close]

BLAST of HO062422 vs. TAIR peptide
Match: AT2G03130.1 (| Symbols: | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein | chr2:940744-941076 FORWARD LENGTH=110)

HSP 1 Score: 52.7582 bits (125), Expect = 2.241e-7
Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = -2

Query:    6 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVP 128
            T F+VKLE F+A AKIK+IKEVR    +GLKEA  LV K P
Sbjct:   22 TVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAP 62

The following BLAST results are available for this feature:

BLAST of HO062422 vs. SwissProt
BLAST of HO062422 vs. TrEMBL
BLAST of HO062422 vs. TAIR peptide

BLAST of HO062422 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
RL7_LIBAF	1.997e-7	70.73	50S ribosomal protein L7/L12 OS=Liberibacter afric...	[more]
RL7_SYNR3	2.608e-7	70.73	50S ribosomal protein L7/L12 OS=Synechococcus sp. ...	[more]
RL7_PROM4	4.449e-7	70.73	50S ribosomal protein L7/L12 OS=Prochlorococcus ma...	[more]
RL7_LIBAC	7.588e-7	71.05	50S ribosomal protein L7/L12 OS=Liberibacter afric...	[more]

BLAST of HO062422 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SZ68_SOYBN	3.372e-50	69.33	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9IES3_POPTR	1.087e-40	60.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q3HVP5_SOLTU	1.420e-40	60.24	Putative uncharacterized protein OS=Solanum tubero...	[more]
B9RB19_RICCO	3.498e-39	66.67	50S ribosomal protein L7/L12, putative OS=Ricinus ...	[more]
Q9M7T1_ARATH	1.090e-32	54.88	Putative uncharacterized protein At3g06040 OS=Arab...	[more]
D7L4R6_ARALY	7.064e-32	54.27	Ribosomal protein L12 family protein OS=Arabidopsi...	[more]
Q6H730_ORYSJ	1.290e-25	53.38	Os02g0198900 protein OS=Oryza sativa subsp. japoni...	[more]
A2X232_ORYSI	1.290e-25	53.38	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6TJY8_MAIZE	1.863e-24	44.24	60S ribosomal protein L7/L12 OS=Zea mays PE=2 SV=1	[more]
B4FBL2_MAIZE	1.863e-24	44.24	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of HO062422 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT3G06040.3	7.390e-35	54.88	\| Symbols: \| Ribosomal protein L12/ ATP-dependent...	[more]
AT3G06040.2	7.390e-35	54.88	\| Symbols: \| Ribosomal protein L12/ ATP-dependent...	[more]
AT3G06040.1	7.390e-35	54.88	\| Symbols: \| Ribosomal protein L12/ ATP-dependent...	[more]
AT1G70190.2	5.506e-14	33.58	\| Symbols: \| Ribosomal protein L7/L12, oligomeris...	[more]
AT1G70190.1	5.506e-14	33.58	\| Symbols: \| Ribosomal protein L7/L12, oligomeris...	[more]
AT4G37660.1	1.771e-12	82.93	\| Symbols: \| Ribosomal protein L12/ ATP-dependent...	[more]
AT4G36420.1	2.165e-10	75.61	\| Symbols: \| Ribosomal protein L12 family protein...	[more]
AT2G03130.1	2.241e-7	63.41	\| Symbols: \| Ribosomal protein L12/ ATP-dependent...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 44..61 score
None	No IPR available	SEG	seg	seg	coord: 42..53 score
None	No IPR available	PANTHER	PTHR11809	RIBOSOMAL PROTEIN L7/L12	coord: 11..166 score: 4.1
None	No IPR available	SEG	seg	seg	coord: 107..124 score
IPR013823	Ribosomal protein L7/L12, C-terminal	PFAM	PF00542	Ribosomal_L12	coord: 127..166 score: 6
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	GENE3D	3.30.1390.10	no description	coord: 122..166 score: 5.2
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	SUPERFAMILY	54736	ClpS-like	coord: 126..165 score: 2.1
IPR015608	Ribosomal protein L12, chloroplast	PANTHER	PTHR11809:SF6	50S RIBOSOMAL PROTEIN L7/L12	coord: 11..166 score: 4.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO062422 ID=HO062422; Name=HO062422; organism=Cicer arietinum; type=EST; length=711bp
CGGGCAGGTACCTTTTCAACTAGATCTTTAGCCTCTTTCAATCCCAAGTT
AGTAAATGCTCTTACCTCCTTAATCACCTTGATCTTTGCAGCAGCATCAA
ATTTCTCTAACTTGACATCAAAAGCAGTTTTCTCAGCCTTTTTCTCCTCA
GCCTTTGGTCCGGCAGCACCGCCTTCTGACCCCAAGTCCATGCCTTCAGT
TGAAATTGGCTGCAACTTTGGAAGCTTTAATCTTTCTGCCAAAGCAGGCA
TAATGAGACCGCGTTCTTCTTCTGATAATGCTCCGATGCGTTCCGCGAGC
TGAACGATTTTGTCTGAAGGTGGAAGTCTAGGGTCATAAGGGTTGTAAAC
TTGAGGAATTTTGTACTTGATTGGCTTTGCCTTAGAATCTCTAGAAACAA
CGTCAGGCTGGAAGGCTCGAGATTGAAATGGCACAAAAGCCCGAGGCCGA
GTGAGATGGCAAATATATCTTGAAAGGGTGATAATCCTCATGTCTTTTGT
TCAATCAAAATAGCGACTAATGGTTAAGCAAAGACGCAGTTTCAATTCAA
TAAACTAGTAGCATCACCACCACAATGATCACACCCTGGATTGACTTGCT
AACAGCTTCTGGTGACCTTACTCCCTGCGATTGCCAACTCCGGCGCCGGC
GAGCTGAGTTGAGTGCGATTTGTCCTGTTTCTGATACCCCCGCGTCCTCG
CCGCGACCACG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR013823	Ribosomal_bL12_C
IPR014719	Ribosomal_bL12_C/ClpS-like
IPR015608	Put_Ribosomal_L7/L12_plants

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