HO664307

EST Overview
NameHO664307
Unique NameHO664307
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length439
Libraries
Library NameType
LIBEST_026619 TDZ treated Chickpea SSH librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO664307 vs. TrEMBL
Match: D7U0M5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017129001 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.944e-9
Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 3
Query:  162 HASALGPGSYMGQQMATNIPMP-RQEVGNFGTEGSVFGLSNPEQQLTDRPSTTPTSNSF-PRGGNPFG 359
            + S +    YMGQQM +N+P P  Q VG FG +G+ FG SN  QQL  R S   T NSF   GGNPFG
Sbjct:  667 YVSGMPQSMYMGQQMHSNLPHPGHQAVGGFGRDGAAFGPSNMNQQLGGRFSAPATPNSFSSMGGNPFG 734          
BLAST of HO664307 vs. TrEMBL
Match: B9ILJ3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_737569 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.893e-8
Identity = 39/116 (33.62%), Postives = 55/116 (47.41%), Query Frame = 3
Query:   18 VPPSVALHPSSPGNPSHAWTPPLRNXXXXXXXXXXXXXXXXXXXXXQTHASALGPGSYMGQQMATNIPMPRQEVGN-FGTEGSVFGLSNPEQQLTDRPSTTPTSNSFPR-GGNPFG 359
            +PPS   H SS G PS AW  P  +                       ++S++ P +Y+ QQ  +++P    +VG  FG +G+ FG  N +QQ+  R S  PT   F   GGNPFG
Sbjct:  545 MPPSGLQHASSLGTPSPAWMSPQSSPYPPALPSQAPP-----------YSSSIPPRAYVAQQAPSSMPFAGHQVGGGFGGDGAAFGAVNMDQQVAGRFSAPPTPQPFSSVGGNPFG 649          
BLAST of HO664307 vs. TrEMBL
Match: D7TBR5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015419001 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.178e-7
Identity = 37/116 (31.90%), Postives = 49/116 (42.24%), Query Frame = 3
Query:   18 VPPSVALHPSSPGNPSHAWTPPLRNXXXXXXXXXXXXXXXXXXXXXQTHASALGPGSYMGQQMATNIP-MPRQEVGNFGTEGSVFGLSNPEQQLTDRPSTTPTSNSFPR-GGNPFG 359
            +PPS+ L  SS       WTPP  +                       +AS + P +YMGQQ+   IP    Q VG+FG+E + F   NP   +  R S     +     GGNPFG
Sbjct:  644 MPPSMGLLHSSSAGTQSTWTPPQSSLYPLAMPPQAPPYVSGMPPQVPPYASGMPPRAYMGQQVPGAIPPSSHQGVGSFGSEDAAFSSLNPNHLIGGRSSAPAALDKLSSVGGNPFG 759          
The following BLAST results are available for this feature:
BLAST of HO664307 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7U0M5_VITVI9.944e-951.47Whole genome shotgun sequence of line PN40024, sca... [more]
B9ILJ3_POPTR2.893e-833.62Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TBR5_VITVI4.178e-731.90Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 31..51
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO664307 ID=HO664307; Name=HO664307; organism=Cicer arietinum; type=EST; length=439bp
GCGTGGTCGCGGCCGAGGTACCACCATCAGTTGCACTACACCCTTCAAGC
CCGGGAAATCCGTCGCATGCATGGACTCCACCCTTGCGCAATCCATCCTA
TGCCTGGACTCCAGCTCCATCGTCATCATATGCATCAGCCCTACCTCCAC
AAGCACAAACTCATGCATCAGCTCTGGGACCAGGGTCTTATATGGGGCAA
CAAATGGCAACTAACATACCAATGCCAAGGCAAGAAGTTGGGAATTTTGG
AACGGAGGGATCCGTTTTCGGCTTGTCAAATCCAGAACAGCAGCTGACTG
ATAGGCCGTCGACCACTCCCACCTCTAACTCATTCCCTAGAGGAGGGAAC
CCATTTGGATAATGTAAAGAATTGTTCACTTAGACTTGTAAATTCAAACA
TCAACTCATTGCACCCTGTACTGGCCCCGGGCGGCCGCT
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