GR396041
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR396041 vs. TrEMBL
Match: Q9LLM2_MEDTR (MTD2 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.439e-34 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 3 Query: 36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCK+LFLYIEKLPLIIPDPRHVSYDPFFR Sbjct: 175 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKILFLYIEKLPLIIPDPRHVSYDPFFR 243
BLAST of GR396041 vs. TrEMBL
Match: B7FKJ7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.439e-34 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 3 Query: 36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCK+LFLYIEKLPLIIPDPRHVSYDPFFR Sbjct: 187 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKILFLYIEKLPLIIPDPRHVSYDPFFR 255
BLAST of GR396041 vs. TrEMBL
Match: C6T3M9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.592e-31 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 C RSQSCPFCRDSLKR NSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLI+PDPR+V YDP R Sbjct: 175 CQRSQSCPFCRDSLKRTNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIVPDPRYVFYDPLLR 243
BLAST of GR396041 vs. TrEMBL
Match: C6T8E1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.791e-30 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 C RSQSCPFCRDSLKR NSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLI+PDPR+V YDP R Sbjct: 161 CQRSQSCPFCRDSLKRTNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIVPDPRYVFYDPPLR 229
BLAST of GR396041 vs. TrEMBL
Match: B9IG88_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825338 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.063e-21 Identity = 46/67 (68.66%), Postives = 59/67 (88.06%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 RSQSCPFCRDSLKRVNSGDLWIYT+ ++I+D+ +I ++N K LF+YI+KLPLI+P+P VSYDP +R Sbjct: 175 RSQSCPFCRDSLKRVNSGDLWIYTNNNEIIDLSSITRQNLKRLFMYIDKLPLIVPEPIFVSYDPRYR 241
BLAST of GR396041 vs. TrEMBL
Match: B9SI15_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0612080 PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.813e-21 Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 RSQSCPFCRDSLKRVNSGDLWIYTD SD VD+ I +ENCK LF+YIEKLPLI+PD + YD R Sbjct: 177 RSQSCPFCRDSLKRVNSGDLWIYTDKSDTVDLPLILRENCKRLFMYIEKLPLIVPDHVIIPYDSHVR 243
BLAST of GR396041 vs. TrEMBL
Match: B9HCM2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_762495 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.005e-20 Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 RSQSCPFCRDSLKRVNSGDLWIYT ++I+D+ +I ++N K LF+YI++LPLI+PDP V Y+P +R Sbjct: 175 RSQSCPFCRDSLKRVNSGDLWIYTSRNEIIDLSSITRQNLKRLFMYIDRLPLIVPDPVLVPYEPCYR 241
BLAST of GR396041 vs. TrEMBL
Match: D7TH79_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033965001 PE=4 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.466e-20 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 RSQSCPFCRDSLKRV+SGDLWIY ++ +I D+ +I +EN K LF++I+KLPLI+PDP +SYDP FR Sbjct: 176 RSQSCPFCRDSLKRVSSGDLWIYMNSHEIDDLSSISRENLKRLFMFIDKLPLIVPDPMFMSYDPPFR 242
BLAST of GR396041 vs. TrEMBL
Match: B9RZ73_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0935970 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.949e-20 Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 RSQSCPFCRDSLKRVNSGDLW++TD+ D+VD T+ +EN + LF+YI+KLPLI+PD +YD R Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDSRDVVDTATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHLR 247
BLAST of GR396041 vs. TrEMBL
Match: B9HP46_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_723062 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.949e-20 Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYD 230 RSQSCPFCR SLKRVNSGDLWIY + SD+VD+ I ++NCK LF+YI+KLPLIIPD ++ YD Sbjct: 177 RSQSCPFCRGSLKRVNSGDLWIYAEKSDVVDLALITRQNCKRLFMYIDKLPLIIPDTVYMPYD 239
BLAST of GR396041 vs. TAIR peptide
Match: AT5G01520.1 (| Symbols: | RING/U-box superfamily protein | chr5:206797-208399 FORWARD LENGTH=242) HSP 1 Score: 93.2041 bits (230), Expect = 1.170e-19 Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242 RSQSCPFCR SLKRVNSGDLWIYT +++I D+ I+KEN K L +YI+KLPL+ DP V Y P R Sbjct: 176 RSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPYAPLPR 242
BLAST of GR396041 vs. TAIR peptide
Match: AT5G58787.2 (| Symbols: | RING/U-box superfamily protein | chr5:23742733-23744324 FORWARD LENGTH=227) HSP 1 Score: 88.1965 bits (217), Expect = 3.763e-18 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVS 224 RSQSCPFCRDSLKRV+SGDLW++ D +D V++ I +EN K LF+YIEKLPL++PD + S Sbjct: 159 RSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYAS 219
BLAST of GR396041 vs. TAIR peptide
Match: AT5G58787.1 (| Symbols: | RING/U-box superfamily protein | chr5:23742733-23744324 FORWARD LENGTH=242) HSP 1 Score: 88.1965 bits (217), Expect = 3.763e-18 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVS 224 RSQSCPFCRDSLKRV+SGDLW++ D +D V++ I +EN K LF+YIEKLPL++PD + S Sbjct: 174 RSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYAS 234
BLAST of GR396041 vs. TAIR peptide
Match: AT3G47160.2 (| Symbols: | RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=257) HSP 1 Score: 87.0409 bits (214), Expect = 8.383e-18 Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPD 209 RS+SCPFCRDSLKRVNSGDLW+ + SD V++ TI +EN K LF+YIEKLPL++PD Sbjct: 189 RSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244
BLAST of GR396041 vs. TAIR peptide
Match: AT3G47160.1 (| Symbols: | RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=245) HSP 1 Score: 87.0409 bits (214), Expect = 8.383e-18 Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPD 209 RS+SCPFCRDSLKRVNSGDLW+ + SD V++ TI +EN K LF+YIEKLPL++PD Sbjct: 177 RSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 232
BLAST of GR396041 vs. TAIR peptide
Match: AT1G13195.2 (| Symbols: | RING/U-box superfamily protein | chr1:4501778-4502855 REVERSE LENGTH=222) HSP 1 Score: 67.3958 bits (163), Expect = 6.874e-12 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 39 LRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSY 227 L+SQSCPFCR S+KRVNS DLW+ +D+VD T +E+ +LYI LP P+ V Y Sbjct: 153 LKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 215
BLAST of GR396041 vs. TAIR peptide
Match: AT1G13195.1 (| Symbols: | RING/U-box superfamily protein | chr1:4501778-4503347 REVERSE LENGTH=260) HSP 1 Score: 67.3958 bits (163), Expect = 6.874e-12 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 39 LRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSY 227 L+SQSCPFCR S+KRVNS DLW+ +D+VD T +E+ +LYI LP P+ V Y Sbjct: 191 LKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 253
BLAST of GR396041 vs. TAIR peptide
Match: AT1G24440.1 (| Symbols: | RING/U-box superfamily protein | chr1:8662340-8663777 FORWARD LENGTH=251) HSP 1 Score: 66.2402 bits (160), Expect = 1.531e-11 Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPF 236 +S+SCPFCR S+KRVNS DLW+ T D+VD T+ KE+ +L+I LP P+ + Y+ + Sbjct: 185 KSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNEY 249 The following BLAST results are available for this feature:
BLAST of GR396041 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR396041 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR396041 ID=GR396041; Name=GR396041; organism=Cicer arietinum; type=EST; length=611bpback to top |