GR396041

EST Overview
NameGR396041
Unique NameGR396041
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length611
Libraries
Library NameType
LIBEST_024781 ICC4958 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR396041 vs. TrEMBL
Match: Q9LLM2_MEDTR (MTD2 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.439e-34
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 3
Query:   36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCK+LFLYIEKLPLIIPDPRHVSYDPFFR
Sbjct:  175 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKILFLYIEKLPLIIPDPRHVSYDPFFR 243          
BLAST of GR396041 vs. TrEMBL
Match: B7FKJ7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.439e-34
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 3
Query:   36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCK+LFLYIEKLPLIIPDPRHVSYDPFFR
Sbjct:  187 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKILFLYIEKLPLIIPDPRHVSYDPFFR 255          
BLAST of GR396041 vs. TrEMBL
Match: C6T3M9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.592e-31
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 3
Query:   36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            C RSQSCPFCRDSLKR NSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLI+PDPR+V YDP  R
Sbjct:  175 CQRSQSCPFCRDSLKRTNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIVPDPRYVFYDPLLR 243          
BLAST of GR396041 vs. TrEMBL
Match: C6T8E1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.791e-30
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 3
Query:   36 CLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            C RSQSCPFCRDSLKR NSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLI+PDPR+V YDP  R
Sbjct:  161 CQRSQSCPFCRDSLKRTNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIVPDPRYVFYDPPLR 229          
BLAST of GR396041 vs. TrEMBL
Match: B9IG88_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825338 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.063e-21
Identity = 46/67 (68.66%), Postives = 59/67 (88.06%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            RSQSCPFCRDSLKRVNSGDLWIYT+ ++I+D+ +I ++N K LF+YI+KLPLI+P+P  VSYDP +R
Sbjct:  175 RSQSCPFCRDSLKRVNSGDLWIYTNNNEIIDLSSITRQNLKRLFMYIDKLPLIVPEPIFVSYDPRYR 241          
BLAST of GR396041 vs. TrEMBL
Match: B9SI15_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0612080 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.813e-21
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            RSQSCPFCRDSLKRVNSGDLWIYTD SD VD+  I +ENCK LF+YIEKLPLI+PD   + YD   R
Sbjct:  177 RSQSCPFCRDSLKRVNSGDLWIYTDKSDTVDLPLILRENCKRLFMYIEKLPLIVPDHVIIPYDSHVR 243          
BLAST of GR396041 vs. TrEMBL
Match: B9HCM2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_762495 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.005e-20
Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            RSQSCPFCRDSLKRVNSGDLWIYT  ++I+D+ +I ++N K LF+YI++LPLI+PDP  V Y+P +R
Sbjct:  175 RSQSCPFCRDSLKRVNSGDLWIYTSRNEIIDLSSITRQNLKRLFMYIDRLPLIVPDPVLVPYEPCYR 241          
BLAST of GR396041 vs. TrEMBL
Match: D7TH79_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033965001 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.466e-20
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            RSQSCPFCRDSLKRV+SGDLWIY ++ +I D+ +I +EN K LF++I+KLPLI+PDP  +SYDP FR
Sbjct:  176 RSQSCPFCRDSLKRVSSGDLWIYMNSHEIDDLSSISRENLKRLFMFIDKLPLIVPDPMFMSYDPPFR 242          
BLAST of GR396041 vs. TrEMBL
Match: B9RZ73_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0935970 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.949e-20
Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            RSQSCPFCRDSLKRVNSGDLW++TD+ D+VD  T+ +EN + LF+YI+KLPLI+PD    +YD   R
Sbjct:  181 RSQSCPFCRDSLKRVNSGDLWVFTDSRDVVDTATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHLR 247          
BLAST of GR396041 vs. TrEMBL
Match: B9HP46_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_723062 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.949e-20
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYD 230
            RSQSCPFCR SLKRVNSGDLWIY + SD+VD+  I ++NCK LF+YI+KLPLIIPD  ++ YD
Sbjct:  177 RSQSCPFCRGSLKRVNSGDLWIYAEKSDVVDLALITRQNCKRLFMYIDKLPLIIPDTVYMPYD 239          
BLAST of GR396041 vs. TAIR peptide
Match: AT5G01520.1 (| Symbols: | RING/U-box superfamily protein | chr5:206797-208399 FORWARD LENGTH=242)

HSP 1 Score: 93.2041 bits (230), Expect = 1.170e-19
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPFFR 242
            RSQSCPFCR SLKRVNSGDLWIYT +++I D+  I+KEN K L +YI+KLPL+  DP  V Y P  R
Sbjct:  176 RSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPYAPLPR 242          
BLAST of GR396041 vs. TAIR peptide
Match: AT5G58787.2 (| Symbols: | RING/U-box superfamily protein | chr5:23742733-23744324 FORWARD LENGTH=227)

HSP 1 Score: 88.1965 bits (217), Expect = 3.763e-18
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVS 224
            RSQSCPFCRDSLKRV+SGDLW++ D +D V++  I +EN K LF+YIEKLPL++PD  + S
Sbjct:  159 RSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYAS 219          
BLAST of GR396041 vs. TAIR peptide
Match: AT5G58787.1 (| Symbols: | RING/U-box superfamily protein | chr5:23742733-23744324 FORWARD LENGTH=242)

HSP 1 Score: 88.1965 bits (217), Expect = 3.763e-18
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVS 224
            RSQSCPFCRDSLKRV+SGDLW++ D +D V++  I +EN K LF+YIEKLPL++PD  + S
Sbjct:  174 RSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYAS 234          
BLAST of GR396041 vs. TAIR peptide
Match: AT3G47160.2 (| Symbols: | RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=257)

HSP 1 Score: 87.0409 bits (214), Expect = 8.383e-18
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPD 209
            RS+SCPFCRDSLKRVNSGDLW+  + SD V++ TI +EN K LF+YIEKLPL++PD
Sbjct:  189 RSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244          
BLAST of GR396041 vs. TAIR peptide
Match: AT3G47160.1 (| Symbols: | RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=245)

HSP 1 Score: 87.0409 bits (214), Expect = 8.383e-18
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPD 209
            RS+SCPFCRDSLKRVNSGDLW+  + SD V++ TI +EN K LF+YIEKLPL++PD
Sbjct:  177 RSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 232          
BLAST of GR396041 vs. TAIR peptide
Match: AT1G13195.2 (| Symbols: | RING/U-box superfamily protein | chr1:4501778-4502855 REVERSE LENGTH=222)

HSP 1 Score: 67.3958 bits (163), Expect = 6.874e-12
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3
Query:   39 LRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSY 227
            L+SQSCPFCR S+KRVNS DLW+    +D+VD  T  +E+    +LYI  LP   P+   V Y
Sbjct:  153 LKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 215          
BLAST of GR396041 vs. TAIR peptide
Match: AT1G13195.1 (| Symbols: | RING/U-box superfamily protein | chr1:4501778-4503347 REVERSE LENGTH=260)

HSP 1 Score: 67.3958 bits (163), Expect = 6.874e-12
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3
Query:   39 LRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSY 227
            L+SQSCPFCR S+KRVNS DLW+    +D+VD  T  +E+    +LYI  LP   P+   V Y
Sbjct:  191 LKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 253          
BLAST of GR396041 vs. TAIR peptide
Match: AT1G24440.1 (| Symbols: | RING/U-box superfamily protein | chr1:8662340-8663777 FORWARD LENGTH=251)

HSP 1 Score: 66.2402 bits (160), Expect = 1.531e-11
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 3
Query:   42 RSQSCPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKMLFLYIEKLPLIIPDPRHVSYDPF 236
            +S+SCPFCR S+KRVNS DLW+ T   D+VD  T+ KE+    +L+I  LP   P+   + Y+ +
Sbjct:  185 KSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNEY 249          
The following BLAST results are available for this feature:
BLAST of GR396041 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9LLM2_MEDTR2.439e-3498.55MTD2 OS=Medicago truncatula PE=2 SV=1[more]
B7FKJ7_MEDTR2.439e-3498.55Putative uncharacterized protein OS=Medicago trunc... [more]
C6T3M9_SOYBN9.592e-3189.86Putative uncharacterized protein OS=Glycine max PE... [more]
C6T8E1_SOYBN2.791e-3089.86Putative uncharacterized protein OS=Glycine max PE... [more]
B9IG88_POPTR1.063e-2168.66Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SI15_RICCO1.813e-2173.13Ubiquitin-protein ligase, putative OS=Ricinus comm... [more]
B9HCM2_POPTR2.005e-2065.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TH79_VITVI4.466e-2067.16Whole genome shotgun sequence of line PN40024, sca... [more]
B9RZ73_RICCO9.949e-2064.18Protein binding protein, putative OS=Ricinus commu... [more]
B9HP46_POPTR9.949e-2069.84Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GR396041 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8
Match NameE-valueIdentityDescription
AT5G01520.11.170e-1964.18| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G58787.23.763e-1863.93| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G58787.13.763e-1863.93| Symbols: | RING/U-box superfamily protein | chr... [more]
AT3G47160.28.383e-1869.64| Symbols: | RING/U-box superfamily protein | chr... [more]
AT3G47160.18.383e-1869.64| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G13195.26.874e-1249.21| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G13195.16.874e-1249.21| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G24440.11.531e-1144.62| Symbols: | RING/U-box superfamily protein | chr... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR396041 ID=GR396041; Name=GR396041; organism=Cicer arietinum; type=EST; length=611bp
TTGTTAGACTTGTCAATTTTTTATTTTTATTCAGGTGTCTTAGGTCTCAA
TCTTGCCCCTTTTGCCGGGATAGCCTGAAGAGAGTGAACTCTGGTGACCT
TTGGATTTACACAGACACAAGTGATATTGTTGATGTTGGAACAATTTTCA
AAGAGAATTGTAAGATGCTGTTTCTTTACATAGAAAAATTGCCTCTTATT
ATTCCAGACCCTAGACATGTGTCTTATGATCCATTTTTTAGGTGAGGTTT
TCCTAGAGGTTTATATCTCTATATTGCCCTTTAAATTCTACTTGTAAATC
CATTTTGGACCATAATTTAATTGTATATATTCTGTTGTCTTTTAACTTTC
AGCTTCAAGTTGATATAATTTATATATTTCTAACACAGAATTCCAATATT
TTGTTGTCTACAACAACAGGGGTATTTTGGTTATTCTATTATGTTCTAAC
TTTGAAGAAAGCAAATAACCTTATCCTTTAGCTAAGCCAATTGTGAATCG
ACATGAGTAAATGATAATTTAATTAATTAATTAATTAATTACATTATCCA
TAAGTGTACAAAATGACAATGATGAGAAAGCAACAATGTCAAATTTATCN
GANAAAAAANN
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