GR405426

EST Overview


Name	GR405426
Unique Name	GR405426
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	336

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28

Homology

[Close]

BLAST of GR405426 vs. TrEMBL
Match: D7T9D3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012000001 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.401e-18
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            DVFL DPMRGG+DDMF+DLVA IHA+D EAL++D  AP R+RLVPEFM+KLAR VSPF
Sbjct:  401 DVFLHDPMRGGRDDMFEDLVAMIHANDPEALAKDAVAPPRKRLVPEFMLKLARAVSPF 458

[Close]

BLAST of GR405426 vs. TrEMBL
Match: A5BXD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017373 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.401e-18
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            DVFL DPMRGG+DDMF+DLVA IHA+D EAL++D  AP R+RLVPEFM+KLAR VSPF
Sbjct:  338 DVFLHDPMRGGRDDMFEDLVAMIHANDPEALAKDAVAPPRKRLVPEFMLKLARAVSPF 395

[Close]

BLAST of GR405426 vs. TrEMBL
Match: B9RL97_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_1463690 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.033e-17
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            DVFLQDPMRGGKD MF+DLVA +HA+D EA ++D  AP RRRLVPEFMI++AR VSPF
Sbjct:  388 DVFLQDPMRGGKDQMFEDLVAIVHANDPEAQAKDAVAPPRRRLVPEFMIQVARKVSPF 445

[Close]

BLAST of GR405426 vs. TrEMBL
Match: D7M7H0_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488435 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.007e-16
Identity = 38/58 (65.52%), Postives = 51/58 (87.93%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FDD+V+ IHA+D +AL++D  AP R+RLVPE ++KLAR VSPF
Sbjct:  370 DLFLQDPLRGGKDELFDDIVSVIHAEDNDALTKDSLAPPRKRLVPELLLKLAREVSPF 427

[Close]

BLAST of GR405426 vs. TrEMBL
Match: Q1KUX4_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.539e-16
Identity = 38/58 (65.52%), Postives = 50/58 (86.21%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHA++ EAL+RD  AP R+RLVPE ++KLAR VSPF
Sbjct:  370 DLFLQDPLRGGKDELFDQIVSVIHANEGEALARDAVAPRRKRLVPELLLKLAREVSPF 427

[Close]

BLAST of GR405426 vs. TrEMBL
Match: Q9M899_ARATH (F16B3.4 protein OS=Arabidopsis thaliana GN=F16B3.4 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.457e-15
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHADD++AL  D  AP R+RLVPEF++KLA  VSPF
Sbjct:  316 DLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLVPEFLLKLAGRVSPF 373

[Close]

BLAST of GR405426 vs. TrEMBL
Match: Q1PET6_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At3g02410 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.457e-15
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHADD++AL  D  AP R+RLVPEF++KLA  VSPF
Sbjct:  365 DLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLVPEFLLKLAGRVSPF 422

[Close]

BLAST of GR405426 vs. TrEMBL
Match: B9HWP2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822162 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.457e-15
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDPMRGG D MF+DLV+ IH+DD EA ++D  AP RRRLVPEFM++LA  VSPF
Sbjct:  460 DLFLQDPMRGGNDRMFEDLVSIIHSDDREAQAKDEVAPPRRRLVPEFMLQLAHRVSPF 517

[Close]

BLAST of GR405426 vs. TrEMBL
Match: B3H6W3_ARATH (Uncharacterized protein At3g02410.2 OS=Arabidopsis thaliana GN=At3g02410 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.457e-15
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHADD++AL  D  AP R+RLVPEF++KLA  VSPF
Sbjct:  296 DLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLVPEFLLKLAGRVSPF 353

[Close]

BLAST of GR405426 vs. TrEMBL
Match: A0MEU1_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.457e-15
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHADD++AL  D  AP R+RLVPEF++KLA  VSPF
Sbjct:  365 DLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLVPEFLLKLAGRVSPF 422

[Close]

BLAST of GR405426 vs. TAIR peptide
Match: AT3G02410.2 (| Symbols: ICME-LIKE2 | alpha/beta-Hydrolases superfamily protein | chr3:492118-494675 REVERSE LENGTH=353)

HSP 1 Score: 85.8853 bits (211), Expect = 5.616e-18
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHADD++AL  D  AP R+RLVPEF++KLA  VSPF
Sbjct:  296 DLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLVPEFLLKLAGRVSPF 353

[Close]

BLAST of GR405426 vs. TAIR peptide
Match: AT3G02410.1 (| Symbols: ICME-LIKE2 | alpha/beta-Hydrolases superfamily protein | chr3:492118-494877 REVERSE LENGTH=422)

HSP 1 Score: 85.8853 bits (211), Expect = 5.616e-18
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FD +V+ IHADD++AL  D  AP R+RLVPEF++KLA  VSPF
Sbjct:  365 DLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLVPEFLLKLAGRVSPF 422

[Close]

BLAST of GR405426 vs. TAIR peptide
Match: AT5G15860.1 (| Symbols: ATPCME, PCME | prenylcysteine methylesterase | chr5:5178676-5181263 REVERSE LENGTH=427)

HSP 1 Score: 85.5001 bits (210), Expect = 7.335e-18
Identity = 36/58 (62.07%), Postives = 50/58 (86.21%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDP+RGGKD++FDD+V+ IHA+D + L++D  AP R+RLVPE ++KLAR +SPF
Sbjct:  370 DLFLQDPLRGGKDELFDDIVSVIHAEDNDGLTKDSLAPPRKRLVPELLLKLAREISPF 427

[Close]

BLAST of GR405426 vs. TAIR peptide
Match: AT1G26120.1 (| Symbols: ICME-LIKE1 | alpha/beta-Hydrolases superfamily protein | chr1:9028656-9031402 REVERSE LENGTH=476)

HSP 1 Score: 71.633 bits (174), Expect = 1.096e-13
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = -2

Query:  162 DVFLQDPMRGGKDDMFDDLVAYIHADDAEALSRDGTAPLRRRLVPEFMIKLARTVSPF 335
            D+FLQDPMRGG D+MF+D+V  +  DD EA+   G +  RRRLVPEFM+KLA  VSPF
Sbjct:  422 DLFLQDPMRGGIDEMFEDIVTVVLGDDQEAI---GKSVDRRRLVPEFMLKLAHWVSPF 476

The following BLAST results are available for this feature:

BLAST of GR405426 vs. TrEMBL
BLAST of GR405426 vs. TAIR peptide

BLAST of GR405426 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7T9D3_VITVI	2.401e-18	75.86	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BXD7_VITVI	2.401e-18	75.86	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RL97_RICCO	2.033e-17	74.14	Catalytic, putative OS=Ricinus communis GN=RCOM_14...	[more]
D7M7H0_ARALY	5.007e-16	65.52	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
Q1KUX4_9ROSI	6.539e-16	65.52	Putative uncharacterized protein OS=Cleome spinosa...	[more]
Q9M899_ARATH	1.457e-15	65.52	F16B3.4 protein OS=Arabidopsis thaliana GN=F16B3.4...	[more]
Q1PET6_ARATH	1.457e-15	65.52	Putative uncharacterized protein OS=Arabidopsis th...	[more]
B9HWP2_POPTR	1.457e-15	68.97	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B3H6W3_ARATH	1.457e-15	65.52	Uncharacterized protein At3g02410.2 OS=Arabidopsis...	[more]
A0MEU1_ARATH	1.457e-15	65.52	Putative uncharacterized protein (Fragment) OS=Ara...	[more]

BLAST of GR405426 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G02410.2	5.616e-18	65.52	\| Symbols: ICME-LIKE2 \| alpha/beta-Hydrolases supe...	[more]
AT3G02410.1	5.616e-18	65.52	\| Symbols: ICME-LIKE2 \| alpha/beta-Hydrolases supe...	[more]
AT5G15860.1	7.335e-18	62.07	\| Symbols: ATPCME, PCME \| prenylcysteine methylest...	[more]
AT1G26120.1	1.096e-13	62.07	\| Symbols: ICME-LIKE1 \| alpha/beta-Hydrolases supe...	[more]

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR405426 ID=GR405426; Name=GR405426; organism=Cicer arietinum; type=EST; length=336bp
ACAAGTTTTCGCAATAACCGAAAATTTTGGTTCTAGTAGTGGAGAGTCTT
CTAAACCTATCAAGTTGATAAATAATCTAGCAGGCCATAATGGTTATTTA
CAAAGCAAAAAAGAATAAAATCAACTATATATGATTGTTAATTGATTCGG
TTTGTTGGCTAGAAAGGACTGACAGTACGAGCCAATTTTATCATGAATTC
GGGTACAAGGCGCCTCCTTAGAGGGGCTGTTCCGTCTCTGGAAAGAGCCT
CGGCATCATCGGCATGGATATATGCTACTAAATCATCAAACATATCGTCT
TTTCCACCCCTCATAGGATCCTGTAGGAACACATCT

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