GR420456

EST Overview


Name	GR420456
Unique Name	GR420456
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	481

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420456 vs. TrEMBL
Match: B9H9E9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_867757 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.015e-8
Identity = 39/73 (53.42%), Postives = 43/73 (58.90%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGM 217
            G VLGSSL    NQFPVG+LGVLLLFAGIELAMAS      DMN K++                 ALGF CG+
Sbjct:  363 GLVLGSSLVMVLNQFPVGVLGVLLLFAGIELAMAS-----RDMNTKEEAFVMLICTAVSITGSSAALGFLCGI 430

[Close]

BLAST of GR420456 vs. TrEMBL
Match: A7X2T1_9ROSI (Putative sulfate transporter (Fragment) OS=Populus tremula x Populus alba GN=Sultr5;1 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.015e-8
Identity = 39/73 (53.42%), Postives = 43/73 (58.90%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGM 217
            G VLGSSL    NQFPVG+LGVLLLFAGIELAMAS      DMN K++                 ALGF CG+
Sbjct:  312 GLVLGSSLVMVLNQFPVGVLGVLLLFAGIELAMAS-----RDMNTKEEAFVMLICSAVSITGSSAALGFLCGI 379

[Close]

BLAST of GR420456 vs. TrEMBL
Match: B9H9E8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1081544 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.261e-8
Identity = 38/74 (51.35%), Postives = 43/74 (58.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKDXXXXXXXXXXXXXXXYA-LGFFCGMV 220
            G VLGSSL     QFPVG+LGVLLLFAGIELA+AS      DMN K++                A LGF CGM+
Sbjct:  373 GLVLGSSLVMVLKQFPVGVLGVLLLFAGIELALAS-----RDMNTKEESFVMLICAAVSLVGSSASLGFVCGMI 441

[Close]

BLAST of GR420456 vs. TrEMBL
Match: A7X2U2_9ROSI (Putative sulfate transporter (Fragment) OS=Populus tremula x Populus alba GN=Sultr5;2 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.036e-8
Identity = 39/82 (47.56%), Postives = 46/82 (56.10%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMVA*VRNLIR 244
            G VLGSSL     QFPVG+LGVLLLFAGIELA+AS      DMN K++                 ALGF CG++  V   +R
Sbjct:  245 GLVLGSSLVMVLKQFPVGVLGVLLLFAGIELALAS-----RDMNTKEEAFVMLICAAVSLVGSSAALGFVCGIIVHVLLYLR 321

[Close]

BLAST of GR420456 vs. TrEMBL
Match: A7X2T7_9ROSI (Putative sulfate transporter (Fragment) OS=Populus tremula x Populus alba GN=Sultr5;2 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.036e-8
Identity = 39/82 (47.56%), Postives = 46/82 (56.10%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMVA*VRNLIR 244
            G VLGSSL     QFPVG+LGVLLLFAGIELA+AS      DMN K++                 ALGF CG++  V   +R
Sbjct:  246 GLVLGSSLVMVLKQFPVGVLGVLLLFAGIELALAS-----RDMNTKEEAFVMLICAAVSLVGSSAALGFVCGIIVHVLLYLR 322

[Close]

BLAST of GR420456 vs. TrEMBL
Match: Q9C973_ARATH (Putative sulfate transporter OS=Arabidopsis thaliana GN=At1g80310 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.577e-8
Identity = 37/74 (50.00%), Postives = 43/74 (58.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMV 220
            G V G+S     +QFP+GILGVLLLFAGIELAMAS      DMN+K+D                 ALGF CG+V
Sbjct:  360 GLVFGNSFVRILSQFPIGILGVLLLFAGIELAMAS-----KDMNSKEDSFIMLVCAAVSMTGSSAALGFGCGVV 428

[Close]

BLAST of GR420456 vs. TrEMBL
Match: Q0WP36_ARATH (Sulfate transporter like protein OS=Arabidopsis thaliana GN=At1g80310 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.577e-8
Identity = 37/74 (50.00%), Postives = 43/74 (58.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMV 220
            G V G+S     +QFP+GILGVLLLFAGIELAMAS      DMN+K+D                 ALGF CG+V
Sbjct:  360 GLVFGNSFVRILSQFPIGILGVLLLFAGIELAMAS-----KDMNSKEDSFIMLVCAAVSMTGSSAALGFGCGVV 428

[Close]

BLAST of GR420456 vs. TrEMBL
Match: D7KX71_ARALY (Sulfate transporter OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895963 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.577e-8
Identity = 37/74 (50.00%), Postives = 43/74 (58.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMV 220
            G V G+S     +QFP+GILGVLLLFAGIELAMAS      DMN+K+D                 ALGF CG+V
Sbjct:  360 GLVFGNSFVRILSQFPIGILGVLLLFAGIELAMAS-----KDMNSKEDSFIMLVCAAVSMTGSSAALGFGCGVV 428

[Close]

BLAST of GR420456 vs. TrEMBL
Match: C0Z3C0_ARATH (AT1G80310 protein OS=Arabidopsis thaliana GN=AT1G80310 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.577e-8
Identity = 37/74 (50.00%), Postives = 43/74 (58.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMV 220
            G V G+S     +QFP+GILGVLLLFAGIELAMAS      DMN+K+D                 ALGF CG+V
Sbjct:  273 GLVFGNSFVRILSQFPIGILGVLLLFAGIELAMAS-----KDMNSKEDSFIMLVCAAVSMTGSSAALGFGCGVV 341

[Close]

BLAST of GR420456 vs. TrEMBL
Match: Q94IN8_BRANA (Putative sulfate transporter OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.590e-8
Identity = 37/74 (50.00%), Postives = 42/74 (56.76%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMV 220
            G V G+S     +QFP+GILGVLLLFAGIELAMAS      DMN K+D                 ALGF CG+V
Sbjct:  359 GLVFGNSFVRILSQFPIGILGVLLLFAGIELAMAS-----KDMNTKEDSFIMLVCAAVSMTGSSAALGFGCGVV 427

[Close]

BLAST of GR420456 vs. TAIR peptide
Match: AT1G80310.1 (| Symbols: | sulfate transmembrane transporters | chr1:30194951-30196345 FORWARD LENGTH=464)

HSP 1 Score: 60.4622 bits (145), Expect = 5.341e-10
Identity = 37/74 (50.00%), Postives = 43/74 (58.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKD-XXXXXXXXXXXXXXXYALGFFCGMV 220
            G V G+S     +QFP+GILGVLLLFAGIELAMAS      DMN+K+D                 ALGF CG+V
Sbjct:  360 GLVFGNSFVRILSQFPIGILGVLLLFAGIELAMAS-----KDMNSKEDSFIMLVCAAVSMTGSSAALGFGCGVV 428

[Close]

BLAST of GR420456 vs. TAIR peptide
Match: AT2G25680.1 (| Symbols: MOT1 | molybdate transporter 1 | chr2:10933167-10934537 REVERSE LENGTH=456)

HSP 1 Score: 55.0694 bits (131), Expect = 2.244e-8
Identity = 32/71 (45.07%), Postives = 37/71 (52.11%), Query Frame = 2

Query:    2 GFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMASICTDMLDMNNKKDXXXXXXXXXXXXXXXYALGFFCG 214
            G VLG SL     +FPVG+LG LLLFAG+ELAMA+      DMN K D                A+GF  G
Sbjct:  363 GLVLGGSLVGILEKFPVGVLGALLLFAGVELAMAA-----RDMNTKGDAFVMLMCTSVSLGSNAAIGFVAG 428

The following BLAST results are available for this feature:

BLAST of GR420456 vs. TrEMBL
BLAST of GR420456 vs. TAIR peptide

BLAST of GR420456 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9H9E9_POPTR	1.015e-8	53.42	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A7X2T1_9ROSI	1.015e-8	53.42	Putative sulfate transporter (Fragment) OS=Populus...	[more]
B9H9E8_POPTR	2.261e-8	51.35	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A7X2U2_9ROSI	5.036e-8	47.56	Putative sulfate transporter (Fragment) OS=Populus...	[more]
A7X2T7_9ROSI	5.036e-8	47.56	Putative sulfate transporter (Fragment) OS=Populus...	[more]
Q9C973_ARATH	6.577e-8	50.00	Putative sulfate transporter OS=Arabidopsis thalia...	[more]
Q0WP36_ARATH	6.577e-8	50.00	Sulfate transporter like protein OS=Arabidopsis th...	[more]
D7KX71_ARALY	6.577e-8	50.00	Sulfate transporter OS=Arabidopsis lyrata subsp. l...	[more]
C0Z3C0_ARATH	6.577e-8	50.00	AT1G80310 protein OS=Arabidopsis thaliana GN=AT1G8...	[more]
Q94IN8_BRANA	8.590e-8	50.00	Putative sulfate transporter OS=Brassica napus PE=...	[more]

BLAST of GR420456 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G80310.1	5.341e-10	50.00	\| Symbols: \| sulfate transmembrane transporters \|...	[more]
AT2G25680.1	2.244e-8	45.07	\| Symbols: MOT1 \| molybdate transporter 1 \| chr2:1...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 49..63 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420456 ID=GR420456; Name=GR420456; organism=Cicer arietinum; type=EST; length=481bp
GGGTTTTGTTTTGGGAAGTTCTTTGGCTCATTTTTTCAATCAATTTCCAG
TGGGGATTTTAGGGGTTTTATTGTTGTTTGCTGGGATTGAATTAGCTATG
GCTTCTATCTGTACTGATATGCTTGATATGAATAACAAAAAGGATTCTTT
TGTTGCTGTTTCTCTTGTTGGAGTTCTGGGGTCCAGTGCTTATGCTCTTG
GGTTTTTCTGTGGTATGGTTGCTTAGGTAAGGAATTTGATAAGGAAGAAT
GAACATCATGTATTAAGTCACTTTCTAGTCTTTGTAGAAATATGCATGTC
TTACCAAGTTTGAAGGGTGAAATAAATACTATTATATATATACGGTTGTG
TTTCCTAATAATGTAACTATGATATTATAATTCCAAATAATTGTTTATAT
ATATATAAGAATTTAGTTACGCTTGTTATAATATATACTCTTCTCAATAT
GGTATATGTATGTAGGTGTCACGAGGAATTT

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