HO066609

EST Overview


Name	HO066609
Unique Name	HO066609
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	427

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO066609 vs. TrEMBL
Match: D7TC91_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015009001 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.236e-23
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YSCSKGAFVGVSLEGNIVATRMD NLRFYGDPYLTT+DILLG VDRPKAA+PLYT L D
Sbjct:  410 YSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYTALKD 468

[Close]

BLAST of HO066609 vs. TrEMBL
Match: C6TMG8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.610e-22
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YSCSKGAFVGVSLEGNIVATRMDANL FYGDPYLTT DILLGMVDRPKAAQPLY +L +
Sbjct:    5 YSCSKGAFVGVSLEGNIVATRMDANLCFYGDPYLTTFDILLGMVDRPKAAQPLYGSLQE 63

[Close]

BLAST of HO066609 vs. TrEMBL
Match: B9INB5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_260030 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.989e-22
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YSCSKGAFVGVSLEGNIVATRMD NL+FYGDPYLTT+DILLG VDRPKAA+PLY  L +
Sbjct:  331 YSCSKGAFVGVSLEGNIVATRMDTNLKFYGDPYLTTADILLGTVDRPKAAEPLYAALRE 389

[Close]

BLAST of HO066609 vs. TrEMBL
Match: B9RR35_RICCO (Zinc ion binding protein, putative OS=Ricinus communis GN=RCOM_0708790 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.036e-21
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNL 173
            YSCSKGAFVGVSLEGNIV TR+D NL+FYGDPYLTT+DILLG V+RPKAAQPLYT L
Sbjct:  428 YSCSKGAFVGVSLEGNIVTTRLDVNLKFYGDPYLTTNDILLGTVERPKAAQPLYTAL 484

[Close]

BLAST of HO066609 vs. TrEMBL
Match: D7LM87_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484792 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.968e-20
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YS SKGAFVGVSLEGN+VATR D N++FYGDPYLTT+DILLGMVD+PKAA+PLYT L D
Sbjct:  411 YSRSKGAFVGVSLEGNVVATRRDMNVKFYGDPYLTTTDILLGMVDQPKAAEPLYTALRD 469

[Close]

BLAST of HO066609 vs. TrEMBL
Match: C5X3I0_SORBI (Putative uncharacterized protein Sb02g008830 OS=Sorghum bicolor GN=Sb02g008830 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.968e-20
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YSCSKGAF+GVSLEGN+VATRMDANLRFYGDPYLTTSDIL G V+RP AA+ LYT L D
Sbjct:  431 YSCSKGAFIGVSLEGNLVATRMDANLRFYGDPYLTTSDILTGNVERPNAAKFLYTALDD 489

[Close]

BLAST of HO066609 vs. TrEMBL
Match: B9MT45_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_281706 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.357e-20
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNL 173
            YSCSKGAFVGVSLEGNI+ATR + NL+FYGDPYL+T+DILLG VDRPKAA+PLYT L
Sbjct:  339 YSCSKGAFVGVSLEGNILATRTETNLKFYGDPYLSTADILLGTVDRPKAAEPLYTAL 395

[Close]

BLAST of HO066609 vs. TrEMBL
Match: A9PHU1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.357e-20
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNL 173
            YSCSKGAFVGVSLEGNI+ATR + NL+FYGDPYL+T+DILLG VDRPKAA+PLYT L
Sbjct:  391 YSCSKGAFVGVSLEGNILATRTETNLKFYGDPYLSTADILLGTVDRPKAAEPLYTAL 447

[Close]

BLAST of HO066609 vs. TrEMBL
Match: Q9LXL1_ARATH (Putative uncharacterized protein At3g43230 OS=Arabidopsis thaliana GN=F7K15_80 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.766e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YS SKGAFVGVSLEGN+VATR D N++FYGDPYL+TSDILLGMVD+PKAA+PLYT L +
Sbjct:  420 YSRSKGAFVGVSLEGNLVATRRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRE 478

[Close]

BLAST of HO066609 vs. TrEMBL
Match: Q8LG81_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.766e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YS SKGAFVGVSLEGN+VATR D N++FYGDPYL+TSDILLGMVD+PKAA+PLYT L +
Sbjct:  421 YSRSKGAFVGVSLEGNLVATRRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRE 479

[Close]

BLAST of HO066609 vs. TAIR peptide
Match: AT3G43230.1 (| Symbols: | RING/FYVE/PHD-type zinc finger family protein | chr3:15207776-15209599 FORWARD LENGTH=485)

HSP 1 Score: 99.7525 bits (247), Expect = 5.996e-22
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YS SKGAFVGVSLEGN+VATR D N++FYGDPYL+TSDILLGMVD+PKAA+PLYT L +
Sbjct:  420 YSRSKGAFVGVSLEGNLVATRRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRE 478

[Close]

BLAST of HO066609 vs. TAIR peptide
Match: AT1G29800.2 (| Symbols: | RING/FYVE/PHD-type zinc finger family protein | chr1:10432736-10435046 FORWARD LENGTH=496)

HSP 1 Score: 71.633 bits (174), Expect = 1.749e-13
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YSCSKGAFVG SLEG+I  TR   N RFYG   L  SDILLG + RP AA  LY  L D
Sbjct:  431 YSCSKGAFVGCSLEGSIFTTRTSENSRFYGSQSLAASDILLGSLPRPPAAAALYRALGD 489

[Close]

BLAST of HO066609 vs. TAIR peptide
Match: AT1G29800.1 (| Symbols: | RING/FYVE/PHD-type zinc finger family protein | chr1:10432736-10435177 FORWARD LENGTH=510)

HSP 1 Score: 71.633 bits (174), Expect = 1.749e-13
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 3

Query:    3 YSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPKAAQPLYTNLHD 179
            YSCSKGAFVG SLEG+I  TR   N RFYG   L  SDILLG + RP AA  LY  L D
Sbjct:  431 YSCSKGAFVGCSLEGSIFTTRTSENSRFYGSQSLAASDILLGSLPRPPAAAALYRALGD 489

The following BLAST results are available for this feature:

BLAST of HO066609 vs. TrEMBL
BLAST of HO066609 vs. TAIR peptide

BLAST of HO066609 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7TC91_VITVI	4.236e-23	89.83	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6TMG8_SOYBN	1.610e-22	89.83	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9INB5_POPTR	7.989e-22	84.75	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9RR35_RICCO	3.036e-21	85.96	Zinc ion binding protein, putative OS=Ricinus comm...	[more]
D7LM87_ARALY	1.968e-20	81.36	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]
C5X3I0_SORBI	1.968e-20	83.05	Putative uncharacterized protein Sb02g008830 OS=So...	[more]
B9MT45_POPTR	3.357e-20	82.46	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A9PHU1_POPTR	3.357e-20	82.46	Putative uncharacterized protein OS=Populus tricho...	[more]
Q9LXL1_ARATH	9.766e-20	79.66	Putative uncharacterized protein At3g43230 OS=Arab...	[more]
Q8LG81_ARATH	9.766e-20	79.66	Putative uncharacterized protein OS=Arabidopsis th...	[more]

BLAST of HO066609 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G43230.1	5.996e-22	79.66	\| Symbols: \| RING/FYVE/PHD-type zinc finger famil...	[more]
AT1G29800.2	1.749e-13	62.71	\| Symbols: \| RING/FYVE/PHD-type zinc finger famil...	[more]
AT1G29800.1	1.749e-13	62.71	\| Symbols: \| RING/FYVE/PHD-type zinc finger famil...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007461	Ysc84 actin-binding domain	PFAM	PF04366	DUF500	coord: 1..59 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 23..34 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO066609 ID=HO066609; Name=HO066609; organism=Cicer arietinum; type=EST; length=427bp
GGTACAGTTGCAGTAAAGGTGCATTTGTAGGAGTGTCATTGGAAGGGAAT
ATAGTTGCAACCCGGATGGATGCCAATCTGCGCTTTTACGGTGATCCTTA
TCTCACTACATCTGACATTCTACTTGGCATGGTGGACAGACCAAAGGCTG
CTCAACCATTATACACCAACCTTCATGATTTATATTCGAGTTTACGTTAC
TAGGGCTACTACTCCATGGTTTCAGGTGCAGAATTACACCTTTCATTCTG
TCAGCTGCGAATGGAGGTTCAAACACTGCTCATTGTATATACGGTTCTAG
TTCATGCATGCATGGAATTCTGAAATGCGATTCCCCTTGCCAATTTGAAG
TCCTTTATATTTGGTTCATTGGGGGATGAGAAATCTATGTGCTTACACTT
AAGTTATTATACATTACAACAGTACCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007461	Ysc84_actin-binding

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