HO067332
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067332 vs. SwissProt
Match: RLMN_PELPD (Ribosomal RNA large subunit methyltransferase N OS=Pelobacter propionicus (strain DSM 2379) GN=rlmN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.982e-12 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 282 SSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 + K LK +T P LE++++ G +A ++K +Y +D A E+ ++KD + L KA L + + DGTRK LF L+DG +E+V+IP D GR T+C Sbjct: 2 TEKTDLKNLTLPALEQFLRGQGKERFRATQVFKWIYQHD--ARSFQEMTNISKDLRAELEAKAYISNLEPEAVEVGGDGTRKYLFGLEDGNSVESVLIP-DEGRNTLC 106
BLAST of HO067332 vs. SwissProt
Match: RLMN_SYNFM (Ribosomal RNA large subunit methyltransferase N OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rlmN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.703e-11 Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 291 VLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 V +K T PELE+WVQ G R +A L++ +YG + E L++ F+ L + AL+V A DGT K LF L DG IE V+IP D R+T+C Sbjct: 4 VCVKDFTLPELEEWVQGIGERSFRARQLFRHVYGRGV--RSWSECSDLSRMFRVQLEHGVELDALSVLKKEQADDGTSKYLFGLRDGHSIEAVLIP-DLPRSTLC 105
BLAST of HO067332 vs. SwissProt
Match: RLMN_GEOUR (Ribosomal RNA large subunit methyltransferase N OS=Geobacter uraniireducens (strain Rf4) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.904e-11 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 288 KVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 KV +K T ELE ++ G +A ++K +Y D A + ++ L+KDF++ L + A L + + ++DGT+K LF L DG +E+V+IP D RTT+C Sbjct: 3 KVDIKNFTLQELEAYIAGQGKERFRAKQIFKWLYQQD--AREFADMTNLSKDFRQELEKTAWISNLDAEAVEASADGTKKYLFRLADGNAVESVLIP-DEDRTTLC 105
BLAST of HO067332 vs. SwissProt
Match: RLMN_GEOSL (Ribosomal RNA large subunit methyltransferase N OS=Geobacter sulfurreducens GN=rlmN PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.637e-9 Identity = 35/103 (33.98%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 297 LKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 +KG++ ELE+++ G +A ++K +Y A E+ L K+ ++ L E A L+ + + + DGTRK LF LDDG +E+V+IP + R T+C Sbjct: 7 IKGLSIDELERFLLGKGKERYRARQIFKWLYQRG--ATSFAEMTDLAKELRRDLEETARISTLSPEALEISRDGTRKYLFRLDDGCSVESVLIP-EEDRNTLC 106
BLAST of HO067332 vs. SwissProt
Match: RLMN_GEOMG (Ribosomal RNA large subunit methyltransferase N OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rlmN PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.637e-9 Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 282 SSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 + K+ +K +T +L ++ G +A ++K +Y D A E+ L KD ++ L E A L + + + DGTRK LF L+DG +E+V+IP + RTT+C Sbjct: 3 NGKIDIKNLTLDDLIAFLAGKGKERYRARQIFKWLYQKD--ARSFAEMTDLAKDLRRDLEETAVISDLEPEAMEVSRDGTRKYLFRLEDGNTVESVLIP-EEDRTTLC 107
BLAST of HO067332 vs. SwissProt
Match: RLMN_STRA5 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus agalactiae serotype V GN=rlmN PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.033e-8 Identity = 33/100 (33.00%), Postives = 53/100 (53.00%), Query Frame = 3 Query: 276 TRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVII 575 T + K + +T EL W HG + +A +W +Y + DE+ ++KDF +L+E L + + ++DGT K LF L DGM+IETV++ Sbjct: 7 TPAYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKKRV--QSFDEMTNISKDFIALLNENFVVNPLKQRIVQESADGTVKYLFELPDGMLIETVLM 104
BLAST of HO067332 vs. SwissProt
Match: RLMN_ACHLI (Ribosomal RNA large subunit methyltransferase N OS=Acholeplasma laidlawii (strain PG-8A) GN=rlmN PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.033e-8 Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 291 VLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRG 590 +L+ +TY ELE+++ +GY+ +A +W +Y I A E+ + +D K+L++ F L +T++DGT K LF L D +IETV++ + G Sbjct: 1 MLIYDLTYEELEEFIVENGYKKFRADQIWNWLYKQKIEA--FSEMNNIPEDIIKLLNDNYTFAGLETVIKNTSADGTIKFLFDLKDANLIETVLMSHNYG 98
BLAST of HO067332 vs. SwissProt
Match: RLMN_STRA3 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus agalactiae serotype III GN=rlmN PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.349e-8 Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 3 Query: 276 TRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVII 575 T K + +T EL W HG + +A +W +Y + DE+ ++KDF +L+E L + + ++DGT K LF L DGM+IETV++ Sbjct: 7 TPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKKRV--QSFDEMTNISKDFIALLNENFVVNPLKQRIVQESADGTVKYLFELPDGMLIETVLM 104
BLAST of HO067332 vs. SwissProt
Match: RLMN_STRA1 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus agalactiae serotype Ia GN=rlmN PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.349e-8 Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 3 Query: 276 TRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVII 575 T K + +T EL W HG + +A +W +Y + DE+ ++KDF +L+E L + + ++DGT K LF L DGM+IETV++ Sbjct: 7 TPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKKRV--QSFDEMTNISKDFIALLNENFVVNPLKQRIVQESADGTVKYLFELPDGMLIETVLM 104
BLAST of HO067332 vs. SwissProt
Match: RLMN_STRTD (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rlmN PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 5.127e-8 Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 3 Query: 288 KVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVII 575 K + G+T EL W HG + +A +W +Y + +E+ ++KDF L++ L + + + DGT K LF L DGM+IETV++ Sbjct: 25 KPSIYGLTRDELIDWAVEHGEKKFRATQIWDWLYKKRV--QSFEEMTNISKDFIAKLNDNFCVNPLKQRIVQESKDGTVKYLFELPDGMLIETVLM 118
BLAST of HO067332 vs. TrEMBL
Match: D7TNS3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020239001 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.069e-46 Identity = 93/122 (76.23%), Postives = 102/122 (83.61%), Query Frame = 3 Query: 240 SHYGDGNGVAVSTRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 S D NG + + SKVLLKGM Y EL+ WVQSHGYRPGQA+MLWKR+YGN+IWAH IDELEGLNKDFK MLSE A+FKAL +KD ASDGTRKILFTLDDG+VIETVIIPCDRGR TVC Sbjct: 64 SSAADENGNPI--KGSKVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSEHAEFKALTLKDSIKASDGTRKILFTLDDGLVIETVIIPCDRGRNTVC 183
BLAST of HO067332 vs. TrEMBL
Match: Q93XX3_ARATH (Putative uncharacterized protein At1g60230 OS=Arabidopsis thaliana GN=At1g60230/ T13D8.12 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.609e-44 Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 234 NFSHYGDGNGVAVSTRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 + Y G + KV+LKGMTY L++WVQSHG+RPGQA+MLWKR+Y ++IWA+ +DELEGLNKD K+M+SE A+F AL+ KDI +ASDGTRKILFTLDDG+VIETV+IPCDRGRTTVC Sbjct: 76 SLEEYPSAKGSVKRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVC 199
BLAST of HO067332 vs. TrEMBL
Match: O80746_ARATH (T13D8.12 protein OS=Arabidopsis thaliana GN=T13D8.12 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.609e-44 Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 234 NFSHYGDGNGVAVSTRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 + Y G + KV+LKGMTY L++WVQSHG+RPGQA+MLWKR+Y ++IWA+ +DELEGLNKD K+M+SE A+F AL+ KDI +ASDGTRKILFTLDDG+VIETV+IPCDRGRTTVC Sbjct: 72 SLEEYPSAKGSVKRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVC 195
BLAST of HO067332 vs. TrEMBL
Match: D7KXB2_ARALY (Radical SAM domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_893522 PE=4 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.609e-44 Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 234 NFSHYGDGNGVAVSTRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 + Y G + KV+LKGMTY L++WVQSHG+RPGQA+MLWKR+Y ++IWA+ +DELEGLNKD K+M+SE A+F AL+ KDI +ASDGTRKILFTLDDG+VIETV+IPCDRGRTTVC Sbjct: 76 SLEEYPSTKGSVARDDNQKVILKGMTYAALQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVC 199
BLAST of HO067332 vs. TrEMBL
Match: C5XEK5_SORBI (Putative uncharacterized protein Sb03g029230 OS=Sorghum bicolor GN=Sb03g029230 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.228e-43 Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 285 SKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 SK +LKGM Y ELE WVQ+ G+RPGQAMMLWK +YGN++WAH DEL GLNKDF+KM++E AD KAL VKDIHTASDGTRKILF+L+DG VIETVIIPC RGRTTVC Sbjct: 46 SKAMLKGMDYSELENWVQAQGFRPGQAMMLWKCLYGNNVWAHCYDELTGLNKDFRKMITEHADLKALTVKDIHTASDGTRKILFSLEDGSVIETVIIPCARGRTTVC 152
BLAST of HO067332 vs. TrEMBL
Match: B9SHC0_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_0528960 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.388e-42 Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 3 Query: 249 GDGNGVAVSTRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGND-IWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 G + A+ + KVLLKGM+Y ELEKWVQSHG+RPGQAMMLWKR+Y N+ AH DELEGLNKDFKKMLSE A KA++++D+ TASDGT+KILF LDD MVIETVIIPCDRGRTTVC Sbjct: 64 GSDDTSAIPNKDGKVLLKGMSYTELEKWVQSHGFRPGQAMMLWKRLYANNNTLAHYFDELEGLNKDFKKMLSEHARLKAISMEDVVTASDGTKKILFRLDDEMVIETVIIPCDRGRTTVC 183
BLAST of HO067332 vs. TrEMBL
Match: B4FQV1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.994e-42 Identity = 79/107 (73.83%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 285 SKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 SK +LKGM Y ELE WVQ+ G+RPGQAMMLWK +YGN++WAH DEL GLNKDF+KM++E AD KAL +KDIH ASDGTRKILF+L+DG VIETVIIPC RGRTT+C Sbjct: 48 SKAMLKGMDYSELENWVQAQGFRPGQAMMLWKCLYGNNVWAHCYDELAGLNKDFRKMITEHADLKALTMKDIHIASDGTRKILFSLEDGSVIETVIIPCARGRTTIC 154
BLAST of HO067332 vs. TrEMBL
Match: Q0JKY3_ORYSJ (Os01g0640800 protein OS=Oryza sativa subsp. japonica GN=Os01g0640800 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.418e-41 Identity = 79/107 (73.83%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 285 SKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 S+V+LKGM YPELE WV+S G+RPGQAMMLWK +YGN++WAH DEL GLNKDF+KML++ AD KAL VKDI ASDGTRKILF+L+DG VIETV+IPC GRTTVC Sbjct: 44 SRVMLKGMDYPELENWVRSQGFRPGQAMMLWKCLYGNNVWAHCYDELAGLNKDFRKMLTDHADLKALTVKDILNASDGTRKILFSLEDGSVIETVVIPCTSGRTTVC 150
BLAST of HO067332 vs. TrEMBL
Match: B8ACC7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03021 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.418e-41 Identity = 79/107 (73.83%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 285 SKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 S+V+LKGM YPELE WV+S G+RPGQAMMLWK +YGN++WAH DEL GLNKDF+KML++ AD KAL VKDI ASDGTRKILF+L+DG VIETV+IPC GRTTVC Sbjct: 44 SRVMLKGMDYPELENWVRSQGFRPGQAMMLWKCLYGNNVWAHCYDELAGLNKDFRKMLTDHADLKALTVKDILNASDGTRKILFSLEDGSVIETVVIPCTSGRTTVC 150
BLAST of HO067332 vs. TrEMBL
Match: B9HU71_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_884093 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.375e-36 Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 327 KWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEG---------LNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 +WVQS+G+RPGQAMMLWKR+YGN IWAH +DEL+G LNKDF KML E A FKAL++++I TASDGTRKILF LDDG+VIETV+IPCDRGRTTVC Sbjct: 1 EWVQSYGFRPGQAMMLWKRLYGNGIWAHHVDELQGILLSHPIYCLNKDFVKMLGEHAKFKALSLENILTASDGTRKILFRLDDGLVIETVVIPCDRGRTTVC 102
BLAST of HO067332 vs. TAIR peptide
Match: AT1G60230.1 (| Symbols: | Radical SAM superfamily protein | chr1:22212223-22214346 REVERSE LENGTH=458) HSP 1 Score: 180.259 bits (456), Expect = 7.141e-46 Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 234 NFSHYGDGNGVAVSTRSSKVLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNDIWAHQIDELEGLNKDFKKMLSEKADFKALAVKDIHTASDGTRKILFTLDDGMVIETVIIPCDRGRTTVC 605 + Y G + KV+LKGMTY L++WVQSHG+RPGQA+MLWKR+Y ++IWA+ +DELEGLNKD K+M+SE A+F AL+ KDI +ASDGTRKILFTLDDG+VIETV+IPCDRGRTTVC Sbjct: 76 SLEEYPSAKGSVKRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVC 199 The following BLAST results are available for this feature:
BLAST of HO067332 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of HO067332 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO067332 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067332 ID=HO067332; Name=HO067332; organism=Cicer arietinum; type=EST; length=605bpback to top |