HO664274
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO664274 vs. SwissProt
Match: SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g45070 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.420e-7 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 143 GAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 GA G G+ML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 31 GASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81
BLAST of HO664274 vs. TrEMBL
Match: A9PF90_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_740095 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 6.748e-9 Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 2 Query: 116 LMRMKTADAGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVVLLDA 307 + R +T GA G GTML YT DAPGL SP+V + S GFIA VA L V GKLY+V DA Sbjct: 19 MRRRRTTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYLVRRDA 82
BLAST of HO664274 vs. TrEMBL
Match: C6T1E8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.712e-8 Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 107 TLKLMRMKTADAGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVVLLDA 307 T + R +T A G GTML YT DAPGL SP+V + S GFIA VA L V GKLY V +A Sbjct: 16 TASMRRRRTTGGAASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82
BLAST of HO664274 vs. TrEMBL
Match: B9RD56_RICCO (Protein transport protein Sec61 subunit beta, putative OS=Ricinus communis GN=RCOM_1609790 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 9.744e-8 Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 2 Query: 107 TLKLMRMKTADAGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVVLLDA 307 T L R +T GA G GTML YT D+ GL SP+V + S GFIA VA L V GKLY+V +A Sbjct: 16 TASLRRRRTTSGGASGGAAGTMLQFYTDDSSGLKISPNVVLIMSIGFIAFVAILHVVGKLYLVRREA 82
BLAST of HO664274 vs. TrEMBL
Match: D7SLR7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018177001 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.835e-7 Identity = 33/64 (51.56%), Postives = 37/64 (57.81%), Query Frame = 2 Query: 116 LMRMKTADAGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVVLLDA 307 L R +T G G G ML YT DAPGL SP+V + S GFIA VA L V GKLY V +A Sbjct: 49 LRRRRTTSGGTAGVASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRKEA 112
BLAST of HO664274 vs. TrEMBL
Match: A9P911_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644302 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 6.316e-7 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 2 Query: 116 LMRMKTADAGAIGSI--IGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVVLLDA 307 + R +T GA G GTML YT DAPGL SP+V + S GFIA VA L V GKLY+V +A Sbjct: 19 MRRRRTVSGGASGGAGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYLVRREA 84
BLAST of HO664274 vs. TrEMBL
Match: D7SLS2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018182001 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 8.249e-7 Identity = 32/64 (50.00%), Postives = 36/64 (56.25%), Query Frame = 2 Query: 116 LMRMKTADAGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVVLLDA 307 L R +T G G ML YT DAPGL SP+V + S GFIA VA L V GKLY V +A Sbjct: 60 LRRRRTTSGATAGGASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRKEA 123
BLAST of HO664274 vs. TAIR peptide
Match: AT2G45070.4 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82) HSP 1 Score: 55.0694 bits (131), Expect = 2.664e-8 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 143 GAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 GA G G+ML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 31 GASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81
BLAST of HO664274 vs. TAIR peptide
Match: AT2G45070.3 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82) HSP 1 Score: 55.0694 bits (131), Expect = 2.664e-8 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 143 GAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 GA G G+ML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 31 GASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81
BLAST of HO664274 vs. TAIR peptide
Match: AT2G45070.2 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82) HSP 1 Score: 55.0694 bits (131), Expect = 2.664e-8 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 143 GAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 GA G G+ML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 31 GASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81
BLAST of HO664274 vs. TAIR peptide
Match: AT2G45070.1 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82) HSP 1 Score: 55.0694 bits (131), Expect = 2.664e-8 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 143 GAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 GA G G+ML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 31 GASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81
BLAST of HO664274 vs. TAIR peptide
Match: AT3G60540.2 (| Symbols: | Preprotein translocase Sec, Sec61-beta subunit protein | chr3:22375132-22375377 REVERSE LENGTH=81) HSP 1 Score: 54.6842 bits (130), Expect = 3.480e-8 Identity = 35/74 (47.30%), Postives = 40/74 (54.05%), Query Frame = 2 Query: 77 GCPLLFYVLNTLKLMRMKTAD-AGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 G P T + R K A + + G GTML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 5 GAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 78
BLAST of HO664274 vs. TAIR peptide
Match: AT3G60540.1 (| Symbols: | Preprotein translocase Sec, Sec61-beta subunit protein | chr3:22375132-22375377 REVERSE LENGTH=81) HSP 1 Score: 54.6842 bits (130), Expect = 3.480e-8 Identity = 35/74 (47.30%), Postives = 40/74 (54.05%), Query Frame = 2 Query: 77 GCPLLFYVLNTLKLMRMKTAD-AGAIGSIIGTMLHLYTGDAPGLGSSPSVPVEGSCGFIAVVAALMVKGKLYVV 295 G P T + R K A + + G GTML YT DAPGL SP+V + S GFIA VA L V GKLY V Sbjct: 5 GAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 78 The following BLAST results are available for this feature:
BLAST of HO664274 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of HO664274 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 6
BLAST of HO664274 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO664274 ID=HO664274; Name=HO664274; organism=Cicer arietinum; type=EST; length=523bpback to top |