FE673200

EST Overview
NameFE673200
Unique NameFE673200
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length613
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of FE673200 vs. TrEMBL
Match: Q852R1_LOTJA (Serine palmitoyltransferase OS=Lotus japonicus GN=LjLCB2 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.791e-7
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = -2 
Query:  376 VISSVGDLVGIKYFPAEPMKQQQDGKTVKFE 468
            VIS VGDLVGIKYFPAEP KQQQ+GKTVK++
Sbjct:  459 VISRVGDLVGIKYFPAEPSKQQQEGKTVKYD 489
The following BLAST results are available for this feature:
BLAST of FE673200 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q852R1_LOTJA9.791e-783.87Serine palmitoyltransferase OS=Lotus japonicus GN=... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..28
score
NoneNo IPR availableSEGsegsegcoord: 55..66
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE673200 ID=FE673200; Name=FE673200; organism=Cicer arietinum; type=EST; length=613bp
TATAGGCATAGGCCTATAATAGCGATCTTGGTAATTGTCTATAATTTCAG
ACAATATAAGATGCTCAGACAATTTTACATTTTGATTATAATTTAAAACA
AAACTCAGTTTCAAATGAATAATAACCAAACTGCGACTATACACATCATC
TAATGACTGGAAAAGAAAAGAAAAAAACGTACTAGAACTTCCCTCCTTGT
ATCTGAAAACAAAAGAATATATGGATCTGATGCTTTATAAGCCAAGACCT
CACTTTCGAAGATGGCAACAAATTTATACACGCCAGTTAGTTTGAAACCA
CCAGGAAACCTTACAATAACTACAGCTCTATCTTCAATAGTCATTGTTCC
TCTTTCTTCTTATTTGATTCTCTCATTCAAACTTCACAGTTTTACCATCT
TGCTGCTGCTTCATTGGTTCAGCAGGGAAGTATTTTATGCCAACTAGATC
ACCCACACTGCTAATAACCTAAGAAAGGAGCATAATCACAGCAAGTTACA
ATATATAACATACATGGAATCGTACAAATCATCTTGCAAGGACATTGGTA
CAAACAAACCAAAAAGACCAGACATATAATGACCCTTTATATCTGATACG
AACCAAAAAAATA
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