GR394464

EST Overview


Name	GR394464
Unique Name	GR394464
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	679

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_CAEEL (40S ribosomal protein S9 OS=Caenorhabditis elegans GN=rps-9 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.090e-63
Identity = 117/155 (75.48%), Postives = 138/155 (89.03%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            K +++PRRPFEKERLD ELKLIG +GLKNKREVWRV+  + K+RKAAR LLTLEDKDPKRLFEG+A++RRL +IG LDETK KLDYVLGLKV+DFLERRLQTQV K  LAKSIHHAR+LI+Q HIRV +Q+VDVPSF+VR++SQ HIDF+L SP+
Sbjct:   10 KVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPY 164

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_RAT (40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4)

HSP 1 Score: 240.736 bits (613), Expect = 5.270e-63
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDP+RLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_PAPAN (40S ribosomal protein S9 OS=Papio anubis GN=RPS9 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.270e-63
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDP+RLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_MOUSE (40S ribosomal protein S9 OS=Mus musculus GN=Rps9 PE=2 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 5.270e-63
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDP+RLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_HUMAN (40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 PE=1 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 5.270e-63
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDP+RLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_BOVIN (40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.270e-63
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDP+RLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_PODAN (40S ribosomal protein S9 OS=Podospora anserina GN=RPS9 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.616e-62
Identity = 117/155 (75.48%), Postives = 138/155 (89.03%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT++ PRRPFE  RLD+ELKL+GEYGL+NKREVWRV   ++KIR+AAR LLTL++KDPKRLFEG+A+IRRL R+G LDE++ KLDYVL LK +DFLERRLQT V K  LAKSIHHARVLIRQ+HIRVGKQIV+VPSF+VR++SQ HIDFALTSPF
Sbjct:    8 KTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPF 162

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_DROME (40S ribosomal protein S9 OS=Drosophila melanogaster GN=RpS9 PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 9.939e-62
Identity = 115/155 (74.19%), Postives = 138/155 (89.03%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT  TPRRP+EK RLD ELK+IGEYGL+NKREVWRV+ A+ KIRKAAR LLTL++KD KRLF+G+A++RRL RIG LDE++ KLDYVLGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SPF
Sbjct:   12 KTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPF 166

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9_DICDI (40S ribosomal protein S9 OS=Dictyostelium discoideum GN=rps9 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.695e-61
Identity = 112/154 (72.73%), Postives = 136/154 (88.31%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSP 488
            KTS TPRRPFEKER+DAELK++GE+GLKNK EVWRV+ A+ KIRKAAR LL L++KDPKR+FEG A++RRLH++G ++E+K+KLDY+L LKVQDF+ERRLQT V K  LAKSIHHARVLI+ +HIRVGKQ+V+VPSFLVRVESQ H+  A TSP
Sbjct:    7 KTSHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKDPKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSP 160

[Close]

BLAST of GR394464 vs. SwissProt
Match: RS9A_SCHPO (40S ribosomal protein S9-A OS=Schizosaccharomyces pombe GN=rps9a PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.099e-60
Identity = 114/155 (73.55%), Postives = 136/155 (87.74%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT + PRRPFE  RLDAELKL GEYGL+NK E+WRV   ++KIR+AAR LLTL++KDPKRLFEG+AIIRRL R+G LDET+ KLDYVL L+++DFLERRLQTQV K  LAKSIHHARVLI Q+HIRVGKQIV+VPSF+VR+++Q HIDFAL+SP+
Sbjct:   10 KTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPY 164

[Close]

BLAST of GR394464 vs. TrEMBL
Match: A9UDN8_9BILA (Putative 40S ribosomal protein RPS9 OS=Flustra foliacea PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.378e-63
Identity = 120/155 (77.42%), Postives = 139/155 (89.68%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KTS TPRRPFEKERLD ELK+IGEYGLKNKREVWRV+  + KIRKAAR LLTLE+KDPKRL EG+A++RRL RIG LDE+K KLDYVLGLKV+DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PS++VR++SQ HIDF+L SP+
Sbjct:   10 KTSATPRRPFEKERLDQELKIIGEYGLKNKREVWRVKLVLAKIRKAARVLLTLEEKDPKRLLEGNALLRRLVRIGVLDESKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNIPSYVVRLDSQKHIDFSLKSPY 164

[Close]

BLAST of GR394464 vs. TrEMBL
Match: Q32ZL3_9BIVA (40S ribosomal protein S9 OS=Corbicula fluminea GN=rsp9 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.173e-63
Identity = 119/155 (76.77%), Postives = 140/155 (90.32%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT  TPRRPFEKERLD ELKLIGEYGL+NKREVWRV+ AV KIRK+AR LLTLE+KDPKRLFEG+A++RRL RIG LDE+K KLD+VLGL+ +DFLERRLQTQV K  LAKSIHHAR+LIRQ+HIRV KQ+V++PSF+VR++SQ HIDFAL+SP+
Sbjct:   10 KTYTTPRRPFEKERLDQELKLIGEYGLRNKREVWRVKYAVAKIRKSARELLTLEEKDPKRLFEGNALLRRLVRIGVLDESKMKLDFVLGLRTEDFLERRLQTQVFKLGLAKSIHHARILIRQRHIRVRKQVVNIPSFVVRLDSQRHIDFALSSPY 164

[Close]

BLAST of GR394464 vs. TrEMBL
Match: B3RPS2_TRIAD (S9 ribosomal protein OS=Trichoplax adhaerens GN=TRIADDRAFT_35517 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.173e-63
Identity = 120/155 (77.42%), Postives = 139/155 (89.68%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAARTLLTL+DKD KRLFEG+A++RRL RIG LDE+K KLDYVLGL+++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V+VPSF+VR++SQ HIDF+L+SPF
Sbjct:    8 KTYTTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARTLLTLDDKDSKRLFEGNALLRRLVRIGVLDESKMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVRLDSQKHIDFSLSSPF 162

[Close]

BLAST of GR394464 vs. TrEMBL
Match: C3YJC4_BRAFL (Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_126921 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.669e-62
Identity = 119/155 (76.77%), Postives = 138/155 (89.03%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT  TPRRPFEKERLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTLE+KDP+RLFEG+A++RRL R+G LDE K KLDYVLGL+V+DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PS++VRV+SQ HIDF+L SPF
Sbjct:    9 KTYATPRRPFEKERLDQELKLIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRVGVLDEGKMKLDYVLGLRVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNIPSYVVRVDSQKHIDFSLQSPF 163

[Close]

BLAST of GR394464 vs. TrEMBL
Match: A8E6A9_9BILA (Putative 40S ribosomal protein S9 OS=Spadella cephaloptera GN=rps9 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.669e-62
Identity = 119/155 (76.77%), Postives = 140/155 (90.32%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT  TPRRPFEKERLD ELKLIGE+GL+NKREVWRV+ A+ KIRK+AR LLTLE+KDP+RLFEG+A++RRL RIG LDE+K KLDYVLGL+V+DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V+VPSF+VR++SQ HIDF+L SP+
Sbjct:   10 KTYSTPRRPFEKERLDQELKLIGEFGLRNKREVWRVKLALAKIRKSARILLTLEEKDPRRLFEGNALLRRLVRIGVLDESKMKLDYVLGLQVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNVPSFIVRLDSQKHIDFSLKSPY 164

[Close]

BLAST of GR394464 vs. TrEMBL
Match: Q7ZYU4_XENLA (Rps9-prov protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDPKRLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARDLLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. TrEMBL
Match: Q6GNX6_XENLA (MGC80804 protein OS=Xenopus laevis GN=rps9 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDPKRLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. TrEMBL
Match: Q6DFN8_XENTR (Ribosomal protein S9 OS=Xenopus tropicalis GN=rps9 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDPKRLFEG+A++RRL RIG LDE K KLDY+LGLK++DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. TrEMBL
Match: C3KJ85_ANOFI (40S ribosomal protein S9 OS=Anoplopoma fimbria GN=RS9 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 119/156 (76.28%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDPKRLFEG+A++RRL RIG LDE K KLDY+LGLKV+DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. TrEMBL
Match: C1BXT7_ESOLU (40S ribosomal protein S9 OS=Esox lucius GN=RS9 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 119/156 (76.28%), Postives = 138/156 (88.46%), Query Frame = 3

Query:   24 RKTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            RKT  TPRRPFEK RLD ELKLIGEYGL+NKREVWRV+  + KIRKAAR LLTL++KDPKRLFEG+A++RRL RIG LDE K KLDY+LGLKV+DFLERRLQTQV K  LAKSIHHARVLIRQ+HIRV KQ+V++PSF+VR++SQ HIDF+L SP+
Sbjct:   10 RKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPY 165

[Close]

BLAST of GR394464 vs. TAIR peptide
Match: AT5G39850.1 (| Symbols: | Ribosomal protein S4 | chr5:15950053-15951171 FORWARD LENGTH=197)

HSP 1 Score: 228.409 bits (581), Expect = 2.744e-60
Identity = 107/155 (69.03%), Postives = 139/155 (89.68%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT + PRRP+EKERLDAELKL+GEYGL+ KRE+WRV+  +++IR AAR LLTL++K+P+R+FEG+A++RR++R G LDET++KLDYVL L V++FLERRLQT V K  +AKSIHHARVLIRQ+HIRVG+Q+V++PSF+VRVESQ H+DF+LTSPF
Sbjct:   12 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARELLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPF 166

[Close]

BLAST of GR394464 vs. TAIR peptide
Match: AT5G15200.1 (| Symbols: | Ribosomal protein S4 | chr5:4935124-4936334 REVERSE LENGTH=198)

HSP 1 Score: 228.024 bits (580), Expect = 3.583e-60
Identity = 106/155 (68.39%), Postives = 140/155 (90.32%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTSPF 491
            KT + PRRP+EKERLD+ELKL+GEYGL+NKRE+WRV+ ++++IR AAR LLTL++K P+R+FEG+A++RR++R G LDE+++KLDYVL L V++FLERRLQT V K  +AKSIHH+RVLIRQ+HIRVGKQ+V++PSF+VR++SQ HIDFALTSPF
Sbjct:   12 KTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARDLLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPF 166

[Close]

BLAST of GR394464 vs. TAIR peptide
Match: AT5G15200.2 (| Symbols: | Ribosomal protein S4 | chr5:4935602-4936334 REVERSE LENGTH=156)

HSP 1 Score: 180.259 bits (456), Expect = 8.569e-46
Identity = 84/126 (66.67%), Postives = 112/126 (88.89%), Query Frame = 3

Query:   27 KTSQTPRRPFEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIR 404
            KT + PRRP+EKERLD+ELKL+GEYGL+NKRE+WRV+ ++++IR AAR LLTL++K P+R+FEG+A++RR++R G LDE+++KLDYVL L V++FLERRLQT V K  +AKSIHH+RVLIRQ+HIR
Sbjct:   12 KTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARDLLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIR 137

[Close]

BLAST of GR394464 vs. TAIR peptide
Match: AT5G15750.1 (| Symbols: | Alpha-L RNA-binding motif/Ribosomal protein S4 family protein | chr5:5141449-5142701 FORWARD LENGTH=182)

HSP 1 Score: 51.6026 bits (122), Expect = 4.596e-7
Identity = 34/144 (23.61%), Postives = 67/144 (46.53%), Query Frame = 3

Query:   54 FEKERLDAELKLIGEYGLKNKREVWRVRKAVTKIRKAARTLLTLEDKDPKRLFEGDAIIRRLHRIGALDETKSKLDYVLGLKVQDFLERRLQTQVLKRRLAKSIHHARVLIRQKHIRVGKQIVDVPSFLVRVESQSHIDFALTS 485
            +++E    E ++   Y + ++ +  +       ++K    +  ++  DP R+   D ++ +L+ +G +   KS L     L V  F  RRL T ++  + A+    A   I Q H+RVG + +  P+FLV    +  I +  +S
Sbjct:   20 WKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIMKQMDPADPFRIQMTDMLLEKLYNMGVIPTRKS-LTLTERLSVSSFCRRRLSTVLVHLKFAEHHKEAVTYIEQGHVRVGPETITDPAFLVTRNMEDFITWVDSS 162

The following BLAST results are available for this feature:

BLAST of GR394464 vs. SwissProt
BLAST of GR394464 vs. TrEMBL
BLAST of GR394464 vs. TAIR peptide

BLAST of GR394464 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS9_CAEEL	3.090e-63	75.48	40S ribosomal protein S9 OS=Caenorhabditis elegans...	[more]
RS9_RAT	5.270e-63	75.00	40S ribosomal protein S9 OS=Rattus norvegicus GN=R...	[more]
RS9_PAPAN	5.270e-63	75.00	40S ribosomal protein S9 OS=Papio anubis GN=RPS9 P...	[more]
RS9_MOUSE	5.270e-63	75.00	40S ribosomal protein S9 OS=Mus musculus GN=Rps9 P...	[more]
RS9_HUMAN	5.270e-63	75.00	40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 P...	[more]
RS9_BOVIN	5.270e-63	75.00	40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=...	[more]
RS9_PODAN	2.616e-62	75.48	40S ribosomal protein S9 OS=Podospora anserina GN=...	[more]
RS9_DROME	9.939e-62	74.19	40S ribosomal protein S9 OS=Drosophila melanogaste...	[more]
RS9_DICDI	1.695e-61	72.73	40S ribosomal protein S9 OS=Dictyostelium discoide...	[more]
RS9A_SCHPO	1.099e-60	73.55	40S ribosomal protein S9-A OS=Schizosaccharomyces ...	[more]

BLAST of GR394464 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9UDN8_9BILA	5.378e-63	77.42	Putative 40S ribosomal protein RPS9 OS=Flustra fol...	[more]
Q32ZL3_9BIVA	9.173e-63	76.77	40S ribosomal protein S9 OS=Corbicula fluminea GN=...	[more]
B3RPS2_TRIAD	9.173e-63	77.42	S9 ribosomal protein OS=Trichoplax adhaerens GN=TR...	[more]
C3YJC4_BRAFL	2.669e-62	76.77	Putative uncharacterized protein OS=Branchiostoma ...	[more]
A8E6A9_9BILA	2.669e-62	76.77	Putative 40S ribosomal protein S9 OS=Spadella ceph...	[more]
Q7ZYU4_XENLA	3.486e-62	75.64	Rps9-prov protein OS=Xenopus laevis PE=2 SV=1	[more]
Q6GNX6_XENLA	3.486e-62	75.64	MGC80804 protein OS=Xenopus laevis GN=rps9 PE=2 SV...	[more]
Q6DFN8_XENTR	3.486e-62	75.64	Ribosomal protein S9 OS=Xenopus tropicalis GN=rps9...	[more]
C3KJ85_ANOFI	3.486e-62	76.28	40S ribosomal protein S9 OS=Anoplopoma fimbria GN=...	[more]
C1BXT7_ESOLU	3.486e-62	76.28	40S ribosomal protein S9 OS=Esox lucius GN=RS9 PE=...	[more]

BLAST of GR394464 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G39850.1	2.744e-60	69.03	\| Symbols: \| Ribosomal protein S4 \| chr5:15950053...	[more]
AT5G15200.1	3.583e-60	68.39	\| Symbols: \| Ribosomal protein S4 \| chr5:4935124-...	[more]
AT5G15200.2	8.569e-46	66.67	\| Symbols: \| Ribosomal protein S4 \| chr5:4935602-...	[more]
AT5G15750.1	4.596e-7	23.61	\| Symbols: \| Alpha-L RNA-binding motif/Ribosomal ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 3..100 score: 9
IPR002942	RNA-binding S4	PFAM	PF01479	S4	coord: 101..145 score: 2
IPR002942	RNA-binding S4	PROFILE	PS50889	S4	coord: 101..175 score: 10
IPR005710	Ribosomal protein S4/S9, eukaryotic/archaeal	TIGRFAMs	TIGR01018	rpsD_arch: ribosomal protein S4	coord: 1..159 score: 1
IPR018079	Ribosomal protein S4, conserved site	PROSITE	PS00632	RIBOSOMAL_S4	coord: 99..123 score
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 3..185 score: 1.7e
None	No IPR available	GENE3D	3.10.290.10	no description	coord: 103..145 score: 1.3
None	No IPR available	PANTHER	PTHR11831:SF3	40S RIBOSOMAL PROTEIN S9	coord: 3..185 score: 1.7e
None	No IPR available	SEG	seg	seg	coord: 159..181 score
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 4..145 score: 6.8
None	No IPR available	SEG	seg	seg	coord: 10..21 score
None	No IPR available	SEG	seg	seg	coord: 7..27 score
None	No IPR available	SEG	seg	seg	coord: 6..17 score: NAcoord: 18..54 score
None	No IPR available	SEG	seg	seg	coord: 24..50 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR394464 ID=GR394464; Name=GR394464; organism=Cicer arietinum; type=EST; length=679bp
TTTCTTCTTTTCTATAAACAGATAGAAAGACGTCGCAAACACCACGACGT
CCTTTCGAGAAGGAACGTCTTGACGCTGAATTGAAATTAATTGGTGAATA
CGGTCTTAAGAACAAGAGAGAGGTCTGGAGAGTCAGAAAGGCTGTCACTA
AGATAAGAAAGGCTGCTCGTACTCTTCTTACTCTTGAAGATAAAGATCCA
AAGAGACTTTTTGAAGGTGATGCTATTATTCGTCGTCTTCACAGAATTGG
TGCTTTAGATGAAACAAAGAGCAAGCTCGATTACGTTCTTGGTCTCAAGG
TACAAGATTTTCTTGAACGTAGACTCCAAACTCAAGTCTTGAAGAGACGT
CTTGCAAAGTCCATCCATCACGCTCGTGTCTTGATTAGACAAAAGCACAT
TCGTGTCGGAAAGCAAATTGTTGATGTTCCCTCTTTCCTTGTTCGTGTTG
AAAGCCAATCCCACATTGACTTTGCTTTGACCAGCCCATTTGGTGGTGGT
AGACCCGGACGTTTAAAGAGAAAGAAGACTAAGAAGGACGCTGCTCCCGC
TGCTCCTGCTGAGGATGAGGAGTAAATGCCTTTTCCTAAGCTTTTTTTTT
ATAACAATAATTAAAACGATTTTGGAAAAGCAAAACACATAATAAAACAA
ACAATAACAATACTCATCAAGGAAAAAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0015935	small ribosomal subunit

Vocabulary: **Molecular Function**
Term	Definition
GO:0019843	rRNA binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001912	Ribosomal_uS4_N
IPR002942	S4_RNA-bd
IPR005710	Ribosomal_uS4_euk/arc
IPR018079	Ribosomal_S4_CS
IPR022801	Ribosomal_uS4

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