GR402707

EST Overview


Name	GR402707
Unique Name	GR402707
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	505

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR402707 vs. SwissProt
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 8.830e-57
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLIKYMQGKEGKIGVVVGAVTDDI VYDVP IKVTAL+FTETARARI+KAGGECLTFDQLALR PL  +TV LRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG
Sbjct:   63 RLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 180

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BLAST of GR402707 vs. SwissProt
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 9.138e-54
Identity = 98/119 (82.35%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL+++M GKE KI V+VG +TDD+ V+++PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFEKARG+RKSRG
Sbjct:   66 RLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRG 184

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.736e-53
Identity = 97/119 (81.51%), Postives = 111/119 (93.28%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL+++M GK+ KI V+VG +TDD+ V+++PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFEKARG+RKSRG
Sbjct:   66 RLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRG 184

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 9.786e-48
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL++YM GK+GKI V+VG VTDD+ + DVPA+ VTALRFTE+ARARI KAGGECLTFDQLAL  P   +NTV LRGPKN REAVKHFGPAPGVPHSHTKPYVR  G+K E ARGRR+SRG
Sbjct:   66 RLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRG 185

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL18_IXOSC (60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.478e-43
Identity = 83/120 (69.17%), Postives = 102/120 (85.00%), Query Frame = -3

Query:  150 RLIKYMQ--GKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 503
            R+ ++M+  G+E  I VVVG VTDD+ +YDVP +++ ALR TE ARARI KAGGE LTFDQLA++AP G+ TV ++GP+N+REA +HFGPAPGVPHSHTKPYVRSKGRKFE+ARGRRKSR
Sbjct:   65 RVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFERARGRRKSR 184

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL18_ORENI (60S ribosomal protein L18 OS=Oreochromis niloticus GN=rpl18 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 2.854e-39
Identity = 79/121 (65.29%), Postives = 94/121 (77.69%), Query Frame = -3

Query:  147 RLIKYMQ--GKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI+ M+  G+E KI VVVG VTDD+ + D+P +K+ ALR T+ AR RI KAGG+ +TFDQLAL +P GQ TV L GP+ ARE  +HFG APG PHSHTKPYVRSKGRKFE+ARGRR S G
Sbjct:   65 RLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASCG 185

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL18_OREMO (60S ribosomal protein L18 OS=Oreochromis mossambicus GN=rpl18 PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 2.854e-39
Identity = 79/121 (65.29%), Postives = 94/121 (77.69%), Query Frame = -3

Query:  147 RLIKYMQ--GKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI+ M+  G+E KI VVVG VTDD+ + D+P +K+ ALR T+ AR RI KAGG+ +TFDQLAL +P GQ TV L GP+ ARE  +HFG APG PHSHTKPYVRSKGRKFE+ARGRR S G
Sbjct:   65 RLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASCG 185

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL18_ICTPU (60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 3.727e-39
Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = -3

Query:  147 RLIKYM--QGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI+ M  QG+E KI VVVG +TDD+ + ++P +KV ALR T  AR RI KAGG+ +TFDQLA+  P GQ TV L GP+ ARE  +HFG APG PHSHTKPY+RSKGRKFE+ARGRR SRG
Sbjct:   65 RLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARGRRASRG 185

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BLAST of GR402707 vs. SwissProt
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.084e-38
Identity = 76/121 (62.81%), Postives = 97/121 (80.17%), Query Frame = -3

Query:  147 RLIKYMQ--GKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            +++++M+  G+E    V+VG VTDD  ++++P + + ALR T+TARA I KAGGE +TFDQLALR+P G  TV L+G +NAREAVKHFGPAPGVPHSH KP VRSKGRKFE+ARGRR+S G
Sbjct:   65 KVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARGRRRSCG 185

[Close]

BLAST of GR402707 vs. SwissProt
Match: RL18_CAEEL (60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.084e-38
Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = -3

Query:  150 GKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 482
            G E K  V +  VTDD  +Y VP I V AL  TE ARARI  AGGE +T DQLAL++P G+NTVFL+GP++AREA KHFGPAPGVPHSHTKPYVRSKGRKFE+ARGRR SR
Sbjct:   74 GNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEIITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRASR 184

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BLAST of GR402707 vs. TrEMBL
Match: D4P866_LINUS (Putative ribosomal protein L18 (Fragment) OS=Linum usitatissimum PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.300e-56
Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI++ +GKEGKI VVVG +TDDI VYDVPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR SRG
Sbjct:   33 RLIRFTKGKEGKIAVVVGTITDDIRVYDVPAMKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRG 151

[Close]

BLAST of GR402707 vs. TrEMBL
Match: A9PBR7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572675 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.896e-56
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI YM+GKEGKI VVVG +TDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPY+RSKGRKFEKARG+R S+G
Sbjct:   66 RLITYMKGKEGKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFEKARGKRNSKG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: D7U9X5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_60.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031168001 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.877e-55
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL++YM GKEGKI VVVG VTDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKN+REAVKHFG APGVPHSHTKPYVRSKGRKFE+ARGRR SRG
Sbjct:  128 RLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRG 246

[Close]

BLAST of GR402707 vs. TrEMBL
Match: C6SYU5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.877e-55
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI+Y +GKE KI VVVGAVTDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARGR+ SRG
Sbjct:   66 RLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRKNSRG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: C6SWN7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.877e-55
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI+Y +GKE KI VVVGAVTDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARG+R SRG
Sbjct:   66 RLIRYAKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKRNSRG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: A5BIA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022459 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.877e-55
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL++YM GKEGKI VVVG VTDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKN+REAVKHFG APGVPHSHTKPYVRSKGRKFE+ARGRR SRG
Sbjct:   66 RLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: C6T0R5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.451e-55
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLIKY +GKE KI VVVG +TDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARGRR SRG
Sbjct:   66 RLIKYTKGKEDKIAVVVGNITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: B9SAT7_RICCO (60S ribosomal protein L18, putative OS=Ricinus communis GN=RCOM_1178700 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.181e-55
Identity = 104/119 (87.39%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI +M+GKE KI V+VG VTDD+ VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARGRR SRG
Sbjct:   66 RLITFMKGKENKIAVIVGTVTDDVRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: B9I7B8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570762 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 5.461e-55
Identity = 105/119 (88.24%), Postives = 111/119 (93.28%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI Y +GKEGKI VVVG VTDDI VY+VP +KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPYVR+KGRKFEKARG+R S+G
Sbjct:   66 RLITYTKGKEGKIAVVVGTVTDDIRVYEVPTLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSKG 184

[Close]

BLAST of GR402707 vs. TrEMBL
Match: B9GSC1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552462 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 5.461e-55
Identity = 104/119 (87.39%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RLI +M+GKE KI VVVG +TDDI VY+VPA+KVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKNAREAVKHFGPAPGVPHSHTKPY+RSKGRKFEKARG+R S+G
Sbjct:   66 RLITFMKGKEDKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFEKARGKRNSKG 184

[Close]

BLAST of GR402707 vs. TAIR peptide
Match: AT3G05590.1 (| Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187)

HSP 1 Score: 209.149 bits (531), Expect = 1.009e-54
Identity = 98/119 (82.35%), Postives = 112/119 (94.12%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL+++M GKE KI V+VG +TDD+ V+++PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFEKARG+RKSRG
Sbjct:   66 RLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRG 184

[Close]

BLAST of GR402707 vs. TAIR peptide
Match: AT5G27850.1 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr5:9873169-9874297 FORWARD LENGTH=187)

HSP 1 Score: 206.068 bits (523), Expect = 8.538e-54
Identity = 97/119 (81.51%), Postives = 111/119 (93.28%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL+++M GK+ KI V+VG +TDD+ V+++PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTV LRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFEKARG+RKSRG
Sbjct:   66 RLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRG 184

[Close]

BLAST of GR402707 vs. TAIR peptide
Match: AT2G47570.2 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr2:19515898-19516717 REVERSE LENGTH=135)

HSP 1 Score: 189.119 bits (479), Expect = 1.080e-48
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL++YM GK+GKI V+VG VTDD+ + DVPA+ VTALRFTE+ARARI KAGGECLTFDQLAL  P   +NTV LRGPKN REAVKHFGPAPGVPHSHTKPYVR  G+K E ARGRR+SRG
Sbjct:   13 RLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRG 132

[Close]

BLAST of GR402707 vs. TAIR peptide
Match: AT2G47570.1 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr2:19515898-19516717 REVERSE LENGTH=135)

HSP 1 Score: 189.119 bits (479), Expect = 1.080e-48
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = -3

Query:  147 RLIKYMQGKEGKIGVVVGAVTDDIGVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVFLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRG 503
            RL++YM GK+GKI V+VG VTDD+ + DVPA+ VTALRFTE+ARARI KAGGECLTFDQLAL  P   +NTV LRGPKN REAVKHFGPAPGVPHSHTKPYVR  G+K E ARGRR+SRG
Sbjct:   13 RLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRG 132

The following BLAST results are available for this feature:

BLAST of GR402707 vs. SwissProt
BLAST of GR402707 vs. TrEMBL
BLAST of GR402707 vs. TAIR peptide

BLAST of GR402707 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL18_CICAR	8.830e-57	92.44	60S ribosomal protein L18 (Fragment) OS=Cicer arie...	[more]
RL182_ARATH	9.138e-54	82.35	60S ribosomal protein L18-2 OS=Arabidopsis thalian...	[more]
RL183_ARATH	7.736e-53	81.51	60S ribosomal protein L18-3 OS=Arabidopsis thalian...	[more]
RL181_ARATH	9.786e-48	75.83	Putative 60S ribosomal protein L18-1 OS=Arabidopsi...	[more]
RL18_IXOSC	9.478e-43	69.17	60S ribosomal protein L18 OS=Ixodes scapularis GN=...	[more]
RL18_ORENI	2.854e-39	65.29	60S ribosomal protein L18 OS=Oreochromis niloticus...	[more]
RL18_OREMO	2.854e-39	65.29	60S ribosomal protein L18 OS=Oreochromis mossambic...	[more]
RL18_ICTPU	3.727e-39	64.46	60S ribosomal protein L18 OS=Ictalurus punctatus G...	[more]
RL18_TIMBA	1.084e-38	62.81	60S ribosomal protein L18 OS=Timarcha balearica GN...	[more]
RL18_CAEEL	1.084e-38	70.27	60S ribosomal protein L18 OS=Caenorhabditis elegan...	[more]

BLAST of GR402707 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D4P866_LINUS	1.300e-56	90.76	Putative ribosomal protein L18 (Fragment) OS=Linum...	[more]
A9PBR7_POPTR	2.896e-56	89.08	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7U9X5_VITVI	1.877e-55	89.08	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6SYU5_SOYBN	1.877e-55	89.08	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SWN7_SOYBN	1.877e-55	89.08	Putative uncharacterized protein OS=Glycine max PE...	[more]
A5BIA1_VITVI	1.877e-55	89.08	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6T0R5_SOYBN	2.451e-55	89.08	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SAT7_RICCO	4.181e-55	87.39	60S ribosomal protein L18, putative OS=Ricinus com...	[more]
B9I7B8_POPTR	5.461e-55	88.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GSC1_POPTR	5.461e-55	87.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of GR402707 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G05590.1	1.009e-54	82.35	\| Symbols: RPL18 \| ribosomal protein L18 \| chr3:16...	[more]
AT5G27850.1	8.538e-54	81.51	\| Symbols: \| Ribosomal protein L18e/L15 superfami...	[more]
AT2G47570.2	1.080e-48	75.83	\| Symbols: \| Ribosomal protein L18e/L15 superfami...	[more]
AT2G47570.1	1.080e-48	75.83	\| Symbols: \| Ribosomal protein L18e/L15 superfami...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 37..45 score
None	No IPR available	GENE3D	3.100.10.10	no description	coord: 9..73 score: 4.4
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..122 score: 1.9
IPR021131	Ribosomal protein L18e/L15	PFAM	PF00828	Ribosomal_L18e	coord: 8..57 score: 5.4
IPR021131	Ribosomal protein L18e/L15	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 1..74 score: 1.9

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR402707 ID=GR402707; Name=GR402707; organism=Cicer arietinum; type=EST; length=505bp
GAGAATAATCTTTTGGATGCAATTGATTCTTTGTTAAAATAAATATAACA
AAAACTATCTTCAAGGATGATAATATAACATAACAAAAGCTTAATTTGGA
AGTATCAAAACTGAAAACAGACATCTTGGACAACTCAAACTCTAAATCCT
CTGCTCTTTCTCCTCCCTCTAGCCTTCTCAAATTTCCTTCCCTTTGACCT
AACATAAGGCTTGGTATGGCTGTGTGGCACACCAGGAGCAGGACCAAAAT
GTTTCACTGCTTCCCTAGCATTCTTTGGGCCTCTTAAAAAAACCGTGTTC
TGTCCAAGGGGAGCCCTGAGAGCAAGTTGATCAAATGTTAAGCATTCACC
GCCAGCCTTTTCTATTCTTGCACGTGCTGTCTCTGTGAATCTGAGGGCAG
TAACTTTTATTGCTGGAACGTCATATACTCCAATATCATCGGTTACAGCA
CCAACAACAACACCAATTTTACCTTCCTTTCCCTGCATATACTTAATCAA
TCTTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000039	Ribosomal_eL18
IPR021131	Ribosomal_uL15/eL18

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