HO062529

EST Overview
NameHO062529
Unique NameHO062529
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length709
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062529 vs. TrEMBL
Match: D7SNQ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021020001 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.726e-17
Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = -3
Query:    6 NKLKESN--NVGPLHSNSFAQISKNSHESSVSGENIKKRKEIESNGIPRANDNWXXXXXXXXXXXPFAENGRILEPCQISTPNVSDRPGVATSNAMVENKECKVNGFIEAQPLAIPSNKTRTATVPTDLLIEAPSK-THPDTRYLSDIYAVP 452
            +K KESN  +V   H+   + + K+S++S+ +  N +KRK+ ++NG    N+             P  ENGR LEPCQ S    SDR G   +N  VENKE K+NG I AQP ++ S K  +     D + +A  K  HPD++YLS +  VP
Sbjct:  315 DKSKESNKDDVTVTHNIKTSHLHKDSNKSAATEGNHRKRKDSDTNGFLHVNEV-KPNKLPRPTSHPLIENGRKLEPCQTSILITSDRQGGTANNLKVENKEHKLNGIIGAQPFSVASTKPLSVASQADQIADASKKPPHPDSKYLSQVLLVP 465          
BLAST of HO062529 vs. TrEMBL
Match: B9N0T4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_783325 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.015e-14
Identity = 60/165 (36.36%), Postives = 85/165 (51.52%), Query Frame = -3
Query:    6 NKLKESN--NVGPLHSNSFAQISKNSHESSVSGENIKKRKEIESNGIPRANDNWXXXXXXXXXXXPFAENGRILEPCQISTPNVSDRPGVATSNAMVENKECKVNGFIEAQ---------PLAIPSNKTRT----ATVPTDLLIEAPSK-THPDTRYLSDIYAVP 452
            +KLKESN  N+   H+   + +SK S   +V   NIKKRK++++NG   AND               AENGR+L  C+  T  + D+   A  +  V+NK  K+NG IEA+         PL+I   K+ T    +T  TD + E   K  HPD++YL D+  VP
Sbjct:  337 DKLKESNMSNIVGNHTVKASHLSKESFNGAVDEVNIKKRKDLDTNGFLHANDVKPDKLPRPISLPQSAENGRMLGTCENPTAAIRDKQEAANMD-KVDNKGHKINGLIEARAPSISSTTHPLSISLMKSLTNPSHSTAQTDEIAEVSRKQPHPDSKYLPDVLKVP 500          
BLAST of HO062529 vs. TrEMBL
Match: B9GFJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_549791 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.609e-12
Identity = 59/163 (36.20%), Postives = 81/163 (49.69%), Query Frame = -3
Query:    6 QNKLKESNNVGPLHSNSF--AQISKNSHESSVSGENIKKRKEIESNGIPRANDNWXXXXXXXXXXXPF-AENGRILEPCQISTPNVSDRPGVATSNAMVENKECKVNGFIEA---------QPLAIPSNKTRTATVPTDLLIEAPSK-THPDTRYLSDIYAVP 455
            Q+KLKES     + +N+   + + K    S+V   NIKKRK+ ++NG   AND             P  AENGR+L  CQ  T  +  +   A +N  V+NK  K+NG IEA         QPL+I   K   +T  TD + E   K  HPD++YL  +  VP
Sbjct:  332 QDKLKESGKSDAVANNTVKPSHLPKEITNSAVHEVNIKKRKDSDTNGFLHANDIKPDKLPRPASSLPLSAENGRMLGTCQNPTAAIRGKQE-AVNNDKVDNKGHKINGLIEAQALSISSTTQPLSISLMKPLHSTAQTDQIAEVSKKQPHPDSKYLPYVLTVP 493          
BLAST of HO062529 vs. TrEMBL
Match: B9N0T3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_597064 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.340e-11
Identity = 57/164 (34.76%), Postives = 80/164 (48.78%), Query Frame = -3
Query:    6 KLKESNNVGPL--HSNSFAQISKNSHESSVSGENIKKRKEIESNGIPRANDNWXXXXXXXXXXXPFAENGRILEPCQISTPNVSDRPGVATSNAMVENKECKVNGFIEAQPLAIPS-------NKTRTATVP------TDLLIEAPSK-THPDTRYLSDIYAVP 449
            KLKESN    +  H+   + + K S  S V    IKKRK+ ++NG+  A+D               AENGR+L  C+I T  +  R     SN  V++KE K+NG IEA    I S       + T++ T P      TD + E   K  HPD++YL ++  VP
Sbjct:  316 KLKESNMFDLVGDHTVKSSHLLKESTNSVVGDVKIKKRKDSDTNGLLHADDIKPNKLPRPTSLPVSAENGRMLGTCKIPTAVIQGRQEAVNSN-KVDSKEQKINGLIEALAPPITSTTHPQSISLTKSLTKPSHSIAQTDQIAEVSRKQPHPDSKYLLEVLTVP 478          
BLAST of HO062529 vs. TrEMBL
Match: B9GFT6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815628 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.161e-10
Identity = 60/165 (36.36%), Postives = 80/165 (48.48%), Query Frame = -3
Query:    6 KLKESN--NVGPLHSNSFAQISKNSHESSVSGENIKKRKEIESNGIPRAND-NWXXXXXXXXXXXPFAENGRILEPCQISTPNVSDRPGVATSNAMVENKECKVNGFIEAQPLAI-------PSNKTRTATVP------TDLLIEAPSK-THPDTRYLSDIYAVP 449
            KLKESN  +V   H+   + + K S +S+V   NIKKRK+ + NG   AND                AENGR+L  CQIST  +  R   A     V NK   + G IEAQ  +I       P + T++ T P      TD + E   K  HPD++YL ++  VP
Sbjct:  342 KLKESNMSDVVGNHTVKTSHLLKESTDSAVDEVNIKKRKDSDMNGFLHANDIKPNKLPRPTSSLPLSAENGRMLGTCQISTAVIKGRQ-EAVYTEKVGNKGHLIIGLIEAQAPSISSTTESLPISLTKSLTKPLDSSAQTDQIAEVSRKQPHPDSKYLPEVLTVP 505          
BLAST of HO062529 vs. TrEMBL
Match: B9SYL1_RICCO (Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_1416860 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.321e-9
Identity = 54/160 (33.75%), Postives = 76/160 (47.50%), Query Frame = -3
Query:    6 NKLKESNNVGPLHSNSFAQISKNSHESSVSGENIKKRKEIESNGIPRANDNWXXXXXXXXXXXPFA-ENGRILEPCQISTPNVSDRPGVATSNA--MVENK-------ECKVNGFIEAQPLAIPSNKTRTATVPTDLLIEAPSK-THPDTRYLSDIYAVP 452
            +KLKE +       N+ ++I   S+  S    N+ KRKE E NG    N NW             A ENG+ LEPC+ +T  +S +  V   +   M + K       E K+NG + AQP    S K+ +  VP     E  SK  HPDT+YL+ I ++P
Sbjct:  301 SKLKEGSKDSLDFRNTKSEILNLSNVGSAVEGNLGKRKEPERNGYLLDNGNWPNKFPRPVSSSHPATENGKKLEPCRTATQFISKKQWVVHDHKLDMTDKKINGLITAEQKINGLVAAQP-RTSSIKSLSVCVPAIENGETLSKPPHPDTKYLNQILSIP 459          
The following BLAST results are available for this feature:
BLAST of HO062529 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
D7SNQ8_VITVI3.726e-1738.16Whole genome shotgun sequence of line PN40024, sca... [more]
B9N0T4_POPTR1.015e-1436.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GFJ9_POPTR3.609e-1236.20Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9N0T3_POPTR2.340e-1134.76Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GFT6_POPTR1.161e-1036.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SYL1_RICCO8.321e-933.75Nutrient reservoir, putative OS=Ricinus communis G... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 61..147
score
NoneNo IPR availableSEGsegsegcoord: 7..87
score
NoneNo IPR availableSEGsegsegcoord: 1..43
score: NAcoord: 48..76
score
NoneNo IPR availableSEGsegsegcoord: 1..62
score: NAcoord: 66..84
score: NAcoord: 138..149
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062529 ID=HO062529; Name=HO062529; organism=Cicer arietinum; type=EST; length=709bp
CGGGCAGGTACCGCATATATGTCGCTTAGGTACCTGGTATCAGGATGGGT
TTTTGAAGGTGCTTCAATTAACAGATCTGTGGGCACGGTTGCAGTGCGAG
TCTTGTTTGAGGGTATTGCAAGTGGTTGAGCTTCAATGAAGCCATTTACC
TTGCACTCCTTGTTTTCTACCATAGCATTGCTGGTGGCTACTCCTGGCCT
ATCTGAAACATTTGGAGTGGAAATTTGGCAAGGTTCCAATATCCTTCCAT
TTTCCGCGAACGGATGAGAGGAGGATGGTTTTGGCAACTTACTCGGCCAA
TTGTCATTGGCACGTGGAATTCCATTTGACTCAATCTCCTTCCGTTTTTT
GATGTTTTCCCCACTAACAGAACTCTCATGGCTGTTCTTGCTAATCTGTG
CGAACGAATTTGAATGTAAAGGACCAACATTGTTGCTCTCTTTTAATTTA
TTCTGCTCCGTGGTTTTATGTTCAGTATGCTCCTTCTTAGTTTTCTCCTC
TTTCTTCTCTTTATCCCTGTTTTTGTCCTTCCCATGCCCTTTCTTCTCCT
CCTTGCGTTTCCTTTTTTCTCCTCGTTTATCGTCTTTCTTCTTCTTGACC
TTTTCCTTTCCTTCCTCTTTCTTTTCCTTAACCTTTTCTTTTCCTTCGTC
TTTCTTTTCCTTGACTTTTCTTTCCTTCGTCTTTCTTTCCTTAACTTTTC
TTTCCTTCG
back to top