HO664297

EST Overview
NameHO664297
Unique NameHO664297
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length302
Libraries
Library NameType
LIBEST_026619 TDZ treated Chickpea SSH librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
[Close]
BLAST of HO664297 vs. SwissProt
Match: S1FA1_ORYSJ (DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica GN=S1FA1 PE=3 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.029e-7
Identity = 27/63 (42.86%), Postives = 33/63 (52.38%), Query Frame = 3 
Query:   84 SQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ++G NP              F +GNY LYMYAQKT+ PR            E+L+QGVSAPGE
Sbjct:   14 NKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLKREKLKQGVSAPGE 76
[Close]
BLAST of HO664297 vs. SwissProt
Match: S1FA2_ORYSJ (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 2.993e-7
Identity = 26/63 (41.27%), Postives = 33/63 (52.38%), Query Frame = 3 
Query:   84 SQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ++G NP              F +GNY LY+YAQKT+ PR            E+L+QGVSAPGE
Sbjct:   18 NKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMKREKLKQGVSAPGE 80
[Close]
BLAST of HO664297 vs. SwissProt
Match: S1FA2_ARATH (DNA-binding protein S1FA2 OS=Arabidopsis thaliana GN=S1FA2 PE=2 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 6.667e-7
Identity = 26/63 (41.27%), Postives = 32/63 (50.79%), Query Frame = 3 
Query:   84 SQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ++G NP             TFLI NYV+YMYAQK + PR            E+L+QGV  PGE
Sbjct:   14 AKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQGVPVPGE 76
[Close]
BLAST of HO664297 vs. TrEMBL
Match: C6SZW9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.532e-15
Identity = 45/77 (58.44%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   42 ADKVPPSFDRKNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ADKVPPSFDR  AGS+GFNP             TFLIGNYVLY YAQKT+ PR            ERL+QGVSAPGE
Sbjct:    8 ADKVPPSFDR--AGSKGFNPALIVLLLVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 82
[Close]
BLAST of HO664297 vs. TrEMBL
Match: C6SX22_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.532e-15
Identity = 45/82 (54.88%), Postives = 50/82 (60.98%), Query Frame = 3 
Query:   42 ADKVPPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ADKVPPSFDR     K++GS+GFNP             TFLIGNYVLY YAQKT+ PR            ERL+QGVSAPGE
Sbjct:    8 ADKVPPSFDRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 89
[Close]
BLAST of HO664297 vs. TrEMBL
Match: C6SX03_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.731e-14
Identity = 44/82 (53.66%), Postives = 49/82 (59.76%), Query Frame = 3 
Query:   42 ADKVPPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ADKVPPSFDR     K++GS+ FNP             TFLIGNYVLY YAQKT+ PR            ERL+QGVSAPGE
Sbjct:    8 ADKVPPSFDRVGNVIKDSGSKAFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 89
[Close]
BLAST of HO664297 vs. TrEMBL
Match: C6T1F6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.005e-13
Identity = 41/77 (53.25%), Postives = 46/77 (59.74%), Query Frame = 3 
Query:   42 ADKVPPSFDRKNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            +DKVPPSFDR   GS+GFNP              FL+GNYVLY YAQKT+ PR            ERL+QGVSAPGE
Sbjct:    8 SDKVPPSFDR--VGSKGFNPALIVLLLVGGLLLIFLVGNYVLYTYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE 82
[Close]
BLAST of HO664297 vs. TrEMBL
Match: D7SKV6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025155001 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.522e-12
Identity = 40/82 (48.78%), Postives = 48/82 (58.54%), Query Frame = 3 
Query:   42 ADKVPPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ADKVPPSF+R     K+A ++GFNP              FL+GNY LY+YAQKT+ PR            ERL+QGVSAPGE
Sbjct:    8 ADKVPPSFERMGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 89
[Close]
BLAST of HO664297 vs. TrEMBL
Match: B9SGP8_RICCO (DNA-binding protein S1FA, putative OS=Ricinus communis GN=RCOM_0819270 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.197e-11
Identity = 40/82 (48.78%), Postives = 45/82 (54.88%), Query Frame = 3 
Query:   42 ADKVPPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            AD  PPSF       K+  ++GFNP             TFLIGNYVLYMYAQKT+ P+            ERLRQGVSAPGE
Sbjct:    8 ADHSPPSFQNMGNVVKDVETKGFNPGLIVLLVIGGIVLTFLIGNYVLYMYAQKTLPPKKKKPVSKKKMKRERLRQGVSAPGE 89
[Close]
BLAST of HO664297 vs. TrEMBL
Match: D7TQI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025648001 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.350e-11
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 3 
Query:   42 ADKVPPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            A+KVPPSFDR     K+A ++GFNP              FL+GN++LYMYAQKT+               ERL+QGVSAPGE
Sbjct:    8 AEKVPPSFDRMENMVKDAEAKGFNPGLIVLLLVVGVLLVFLVGNFLLYMYAQKTLPRMKKKPVSKKKMKRERLKQGVSAPGE 89
[Close]
BLAST of HO664297 vs. TrEMBL
Match: A9P8U4_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.057e-9
Identity = 37/78 (47.44%), Postives = 41/78 (52.56%), Query Frame = 3 
Query:   54 PPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            PPSF       K+A  +G NP             TFLIGNYVLY YAQKT+ PR            ERL+QGVSAPGE
Sbjct:   11 PPSFQNMGDLIKDAEPKGLNPGLIVLLVIGGLLLTFLIGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE 88
[Close]
BLAST of HO664297 vs. TrEMBL
Match: B9MTA0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_675985 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.686e-9
Identity = 36/78 (46.15%), Postives = 41/78 (52.56%), Query Frame = 3 
Query:   54 PPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            PPSF       K+A  +G NP             TFL+GNYVLY YAQKT+ PR            ERL+QGVSAPGE
Sbjct:   11 PPSFQNMGDLIKDAEPKGLNPGLIVLLVIGGLLLTFLVGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE 88
[Close]
BLAST of HO664297 vs. TrEMBL
Match: A9P8W5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576667 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.021e-8
Identity = 34/82 (41.46%), Postives = 44/82 (53.66%), Query Frame = 3 
Query:   42 ADKVPPSFDR-----KNAGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            +D+ PPSF       K+A  +G NP             +FL+GN+VLY YAQKT+ P+            ERL+QGVSAPGE
Sbjct:    8 SDQSPPSFQNMGNVIKDAEPKGLNPGLIVLLVIGGLLMSFLVGNFVLYTYAQKTLPPKKKKPVSKKKMKKERLKQGVSAPGE 89
[Close]
BLAST of HO664297 vs. TAIR peptide
Match: AT2G37120.1 (| Symbols: | S1FA-like DNA-binding protein | chr2:15594250-15594815 REVERSE LENGTH=76)

HSP 1 Score: 52.7582 bits (125), Expect = 5.254e-8
Identity = 26/63 (41.27%), Postives = 32/63 (50.79%), Query Frame = 3 
Query:   84 SQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            ++G NP             TFLI NYV+YMYAQK + PR            E+L+QGV  PGE
Sbjct:   14 AKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQGVPVPGE 76
[Close]
BLAST of HO664297 vs. TAIR peptide
Match: AT3G09735.1 (| Symbols: | S1FA-like DNA-binding protein | chr3:2986816-2987860 REVERSE LENGTH=73)

HSP 1 Score: 51.9878 bits (123), Expect = 8.962e-8
Identity = 24/63 (38.10%), Postives = 32/63 (50.79%), Query Frame = 3 
Query:   84 SQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            S+G NP             TFL+GN++LY YAQK + PR            E+++QGV  PGE
Sbjct:   11 SKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGVQVPGE 73
[Close]
BLAST of HO664297 vs. TAIR peptide
Match: AT3G53370.1 (| Symbols: | S1FA-like DNA-binding protein | chr3:19788159-19788737 REVERSE LENGTH=76)

HSP 1 Score: 50.8322 bits (120), Expect = 1.996e-7
Identity = 26/65 (40.00%), Postives = 32/65 (49.23%), Query Frame = 3 
Query:   78 AGSQGFNPXXXXXXXXXXXXXTFLIGNYVLYMYAQKTIAPRXXXXXXXXXXXXERLRQGVSAPGE 272
            A ++G NP              FLI NYVLY+YAQK + PR            E+L+QGV  PGE
Sbjct:   12 AEAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVPVPGE 76
The following BLAST results are available for this feature:
BLAST of HO664297 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
S1FA1_ORYSJ1.029e-742.86DNA-binding protein S1FA1 OS=Oryza sativa subsp. j... [more]
S1FA2_ORYSJ2.993e-741.27DNA-binding protein S1FA2 OS=Oryza sativa subsp. j... [more]
S1FA2_ARATH6.667e-741.27DNA-binding protein S1FA2 OS=Arabidopsis thaliana ... [more]
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BLAST of HO664297 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SZW9_SOYBN9.532e-1558.44Putative uncharacterized protein OS=Glycine max PE... [more]
C6SX22_SOYBN9.532e-1554.88Putative uncharacterized protein OS=Glycine max PE... [more]
C6SX03_SOYBN4.731e-1453.66Putative uncharacterized protein OS=Glycine max PE... [more]
C6T1F6_SOYBN4.005e-1353.25Putative uncharacterized protein OS=Glycine max PE... [more]
D7SKV6_VITVI1.522e-1248.78Whole genome shotgun sequence of line PN40024, sca... [more]
B9SGP8_RICCO2.197e-1148.78DNA-binding protein S1FA, putative OS=Ricinus comm... [more]
D7TQI4_VITVI8.350e-1146.34Whole genome shotgun sequence of line PN40024, sca... [more]
A9P8U4_POPTR2.057e-947.44Putative uncharacterized protein OS=Populus tricho... [more]
B9MTA0_POPTR2.686e-946.15Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P8W5_POPTR1.021e-841.46Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of HO664297 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G37120.15.254e-841.27| Symbols: | S1FA-like DNA-binding protein | chr2... [more]
AT3G09735.18.962e-838.10| Symbols: | S1FA-like DNA-binding protein | chr3... [more]
AT3G53370.11.996e-740.00| Symbols: | S1FA-like DNA-binding protein | chr3... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006779DNA binding protein S1FAPFAMPF04689S1FAcoord: 24..90
score: 2.3
NoneNo IPR availableSEGsegsegcoord: 34..46
score: NAcoord: 67..78
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO664297 ID=HO664297; Name=HO664297; organism=Cicer arietinum; type=EST; length=302bp
TCGAGCGGCCGCCCGGGCAGGTACAACCAGCGTCAGCCATGGCCGATAAA
GTTCCTCCTTCATTCGATCGCAAGAATGCTGGATCACAAGGTTTCAACCC
AGGTTTAATAGTTCTGCTAGTTGTTGGTGGGTTGCTTTTGACATTCCTCA
TTGGAAATTATGTGCTCTACATGTATGCACAGAAGACCATTGCTCCTAGA
AAAAAGAAGCCAATCTCAAAAAAGAAGATGAAAAAGGAGAGACTCAGGCA
AGGTGTCTCTGCACCTGGAGAGTAGAGAACTCTGTACCTCGGCCGCGACC
AC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045449regulation of transcription
Vocabulary: INTERPRO
TermDefinition
IPR006779S1FA_DNA-bd