DY475304

EST Overview
NameDY475304
Unique NameDY475304
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length255
Libraries
Library NameType
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of DY475304 vs. TrEMBL
Match: A5B8T4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024425 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.904e-7
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 3
Query:  153 DEESKIGARIRVKXPLKVYHVPKVPEIDLAGMEG 254
            +E  KIGAR+RVK PLKV+HVP+VPE+DL GMEG
Sbjct:   84 EEAGKIGARVRVKVPLKVFHVPRVPEVDLTGMEG 117          
BLAST of DY475304 vs. TrEMBL
Match: B9RGK8_RICCO (Lipoic acid synthetase, putative OS=Ricinus communis GN=RCOM_1454610 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.487e-7
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 3
Query:   90 VCARAAAPPRNSIMMIRCEEKDE----ESKIGARIRVKXPLKVYHVPKVPEIDLAGMEG 254
            +    A+P  +S   +   E +E    E+KIGAR++VK PLKVYHVP+VPE+DL G EG
Sbjct:   77 ISCEVASPTSSSSTTLAQGEGEEPAVGENKIGARVKVKVPLKVYHVPRVPEVDLTGKEG 135          
BLAST of DY475304 vs. TAIR peptide
Match: AT5G23440.1 (| Symbols: FTRA1 | ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 | chr5:7903230-7903778 REVERSE LENGTH=182)

HSP 1 Score: 53.5286 bits (127), Expect = 3.109e-8
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 3
Query:  147 EKDEESKIGARIRVKXPLKVYHVPKVPEIDLAGMEG 254
            E + ++KIG+R+RV  PLKVYHV +VPE+DL GMEG
Sbjct:   97 EAEAKAKIGSRVRVTAPLKVYHVNRVPEVDLEGMEG 132          
BLAST of DY475304 vs. TAIR peptide
Match: AT5G08410.1 (| Symbols: FTRA2 | ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 | chr5:2709974-2710528 REVERSE LENGTH=184)

HSP 1 Score: 53.1434 bits (126), Expect = 4.061e-8
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 3
Query:  144 EEKDEESKIGARIRVKXPLKVYHVPKVPEIDLAGMEG 254
            E++  + KIGAR+RV  PLKVYHV +VPE++L GMEG
Sbjct:   98 EDEKAKEKIGARVRVTVPLKVYHVVRVPEVELMGMEG 134          
The following BLAST results are available for this feature:
BLAST of DY475304 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
A5B8T4_VITVI1.904e-773.53Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RGK8_RICCO2.487e-749.15Lipoic acid synthetase, putative OS=Ricinus commun... [more]
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BLAST of DY475304 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G23440.13.109e-863.89| Symbols: FTRA1 | ferredoxin/thioredoxin reductas... [more]
AT5G08410.14.061e-862.16| Symbols: FTRA2 | ferredoxin/thioredoxin reductas... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..19
score: NAcoord: 48..53
score
NoneNo IPR availableGENE3D2.30.30.50no descriptioncoord: 55..84
score: 1.6
NoneNo IPR availablePANTHERPTHR10949LIPOIC ACID SYNTHETASEcoord: 1..84
score: 7.8
NoneNo IPR availableSEGsegsegcoord: 1..23
score
NoneNo IPR availableSEGsegsegcoord: 3..22
score: NAcoord: 42..54
score
NoneNo IPR availableSEGsegsegcoord: 13..30
score: NAcoord: 46..68
score
NoneNo IPR availableSEGsegsegcoord: 64..83
score
IPR004207Ferredoxin thioredoxin reductase, alpha chainPFAMPF02941FeThRed_Acoord: 56..84
score: 1.4
IPR008990Electron transport accessory proteinSUPERFAMILY50090Electron transport accessory proteinscoord: 54..84
score: 4.6

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DY475304 ID=DY475304; Name=DY475304; organism=Cicer arietinum; type=EST; length=255bp
CCAGTACGCGGGCGAGAAGGATGAGCATGAGCACGAGCATGAGCAGTACG
AGTATGAGTCGAATTGCAACAAAGGCGACTCCGTTGAGAGTTTGTGCAAG
GGCGGCGGCACCACCGAGAAACAGCATAATGATGATAAGATGCGAAGAGA
AAGACGAAGAAAGCAAAATCGGAGCGCGAATTAGGGTGAAGGNTCCTCTT
AAAGTCTACCACGTTCCTAAAGTTCCNGAAATTGATCTCGCTGGTATGGA
AGGNA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0008937ferredoxin-NAD(P) reductase activity
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0009536plastid
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: INTERPRO
TermDefinition
IPR004207Fd_thioredoxin_Rdtase_alpha
IPR008990Elect_transpt_acc-like_dom_sf