FE670633

EST Overview


Name	FE670633
Unique Name	FE670633
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	270

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.188e-25
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+SA TKKV+ SG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TF+KNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   37 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 125

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.188e-25
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+SA TKKV+ SG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TF+KNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   38 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 126

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.525e-24
Identity = 54/89 (60.67%), Postives = 65/89 (73.03%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R++    KV+ SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   31 RKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 119

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.604e-24
Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+SA   K + SG PWYG D V Y+   SGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   30 RKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 118

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.853e-24
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R   TK+VS SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   34 RKTVTKQVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.285e-23
Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R   +K VS SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   16 RKTASKTVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 102

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.285e-23
Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R   +K VS SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   26 RKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 112

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.984e-23
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            + +A  K  + SG PWYG D V Y+   SGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   34 KTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 122

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.898e-23
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            + +A  K  + SG PWYG D V Y+   SGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   34 KTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 122

[Close]

BLAST of FE670633 vs. SwissProt
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.898e-23
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 3

Query:   21 KKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            K   PSG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFA+NRE+EV     A+ GALG VFP+LL RNG
Sbjct:   40 KPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNG 122

[Close]

BLAST of FE670633 vs. TrEMBL
Match: Q9M600_EUPES (Chlorophyll a/b binding protein OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.522e-25
Identity = 58/88 (65.91%), Postives = 67/88 (76.14%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R A TKKV+PSG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   38 RKAATKKVAPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 125

[Close]

BLAST of FE670633 vs. TrEMBL
Match: Q9ZP08_CICAR (Chlorophyll a/b binding protein OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.390e-25
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+SA TKKV+ SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   35 RKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 123

[Close]

BLAST of FE670633 vs. TrEMBL
Match: O81391_MEDSA (Chlorophyll a/b binding protein OS=Medicago sativa GN=CARCAB1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.390e-25
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+SA TKKV+ SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   35 RKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 123

[Close]

BLAST of FE670633 vs. TrEMBL
Match: Q6T705_TRIPR (Chlorophyll a/b binding protein OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.863e-25
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+ A TKKV+ SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   35 RKGATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 123

[Close]

BLAST of FE670633 vs. TrEMBL
Match: A5HSG6_ARTAN (Chloroplast light-harvesting chlorophyll a/b-binding protein (Fragment) OS=Artemisia annua PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.870e-24
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R++A  KKV+PSG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   23 RKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 111

[Close]

BLAST of FE670633 vs. TrEMBL
Match: A3F6K2_PEA (Chloroplast chlorophyll a/b binding protein OS=Pisum sativum GN=cab8 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 6.393e-24
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+SA TKKV+ SG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TF+KNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   35 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 123

[Close]

BLAST of FE670633 vs. TrEMBL
Match: C5X7M3_SORBI (Putative uncharacterized protein Sb02g032040 OS=Sorghum bicolor GN=Sb02g032040 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.424e-23
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R++A   KV+ SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   31 RKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 119

[Close]

BLAST of FE670633 vs. TrEMBL
Match: Q40771_PICAB (Light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 OS=Picea abies GN=Lhcb1*2-2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.144e-23
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIP--WYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R+S+ TKKVS S  P  WYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   42 RKSSTTKKVSASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 132

[Close]

BLAST of FE670633 vs. TrEMBL
Match: Q40247_LACSA (Light-harvesting chlorophyll a/b-binding protein (LHCP) OS=Lactuca sativa GN=cab PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.412e-23
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R++A  KK +PSG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TF+KNRE+EV     A+ GALG VFP+LL RNG
Sbjct:   35 RKTAAAKKAAPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNG 123

[Close]

BLAST of FE670633 vs. TrEMBL
Match: C0PAQ4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.068e-23
Identity = 54/89 (60.67%), Postives = 65/89 (73.03%), Query Frame = 3

Query:    3 RRSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R++    KV+ SG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:    2 RKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 90

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT2G34420.1 (| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265)

HSP 1 Score: 108.997 bits (271), Expect = 6.148e-25
Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R    K   PSG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFA+NRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   34 RKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 121

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT2G34430.1 (| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266)

HSP 1 Score: 108.997 bits (271), Expect = 6.148e-25
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 3

Query:   18 TKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            +K   PSG PWYG D V Y+  FSGEPPSY+ GEFPG  G +TAG SA+ +TFA+NRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   39 SKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 122

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT1G29930.1 (| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267)

HSP 1 Score: 105.916 bits (263), Expect = 5.204e-24
Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R    K   PSG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TFA+NRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   36 RKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT1G29920.1 (| Symbols: CAB2, AB165, LHCB1.1 | chlorophyll A/B-binding protein 2 | chr1:10475089-10475892 REVERSE LENGTH=267)

HSP 1 Score: 105.916 bits (263), Expect = 5.204e-24
Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R    K   PSG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TFA+NRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   36 RKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT1G29910.1 (| Symbols: CAB3, AB180, LHCB1.2 | chlorophyll A/B binding protein 3 | chr1:10472443-10473246 REVERSE LENGTH=267)

HSP 1 Score: 105.916 bits (263), Expect = 5.204e-24
Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 3

Query:    6 RSAPTKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            R    K   PSG PWYG D V Y+  FSGE PSY+ GEFPG  G +TAG SA+ +TFA+NRE+EV  S  A+ GALG VFP+LL RNG
Sbjct:   36 RKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT3G27690.1 (| Symbols: LHCB2.4, LHCB2.3, LHCB2 | photosystem II light harvesting complex gene 2.3 | chr3:10256002-10256921 FORWARD LENGTH=266)

HSP 1 Score: 86.6557 bits (213), Expect = 3.267e-18
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 3

Query:   18 TKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            T K +P  I WYG D   Y+  FS   PSY+ GE+PG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG  FP++L +NG
Sbjct:   41 TVKSTPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 123

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT2G05070.1 (| Symbols: LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 | chr2:1799436-1800329 REVERSE LENGTH=265)

HSP 1 Score: 86.6557 bits (213), Expect = 3.267e-18
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 3

Query:   18 TKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            T K +P  I WYG D   Y+  FS   PSY+ GE+PG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG  FP++L +NG
Sbjct:   40 TVKSTPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 122

[Close]

BLAST of FE670633 vs. TAIR peptide
Match: AT2G05100.1 (| Symbols: LHCB2.1, LHCB2 | photosystem II light harvesting complex gene 2.1 | chr2:1823449-1824331 REVERSE LENGTH=265)

HSP 1 Score: 86.6557 bits (213), Expect = 3.267e-18
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 3

Query:   18 TKKVSPSGIPWYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLLCRNG 269
            T K +P  I WYG D   Y+  FS   PSY+ GE+PG  G +TAG SA+ +TFAKNRE+EV  S  A+ GALG  FP++L +NG
Sbjct:   40 TVKSTPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 122

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BLAST of FE670633 vs. TAIR peptide
Match: AT5G54270.1 (| Symbols: LHCB3, LHCB3*1 | light-harvesting chlorophyll B-binding protein 3 | chr5:22038424-22039383 FORWARD LENGTH=265)

HSP 1 Score: 73.559 bits (179), Expect = 2.862e-14
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 3

Query:   48 WYGVDSV*YIWRFSGEPPSYMRGEFPGVNGGETAGRSAETQTFAKNREMEVFPSTCALCGALGYVFPQLL 257
            WYG D V Y+  FS + PSY+ GEFPG  G +TAG SA+ + FAKNR +EV     A+ GA G + P++L
Sbjct:   47 WYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVL 116

The following BLAST results are available for this feature:

BLAST of FE670633 vs. SwissProt
BLAST of FE670633 vs. TrEMBL
BLAST of FE670633 vs. TAIR peptide

BLAST of FE670633 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CB28_PEA	3.188e-25	62.92	Chlorophyll a-b binding protein 8, chloroplastic O...	[more]
CB22_PEA	3.188e-25	62.92	Chlorophyll a-b binding protein AB80, chloroplasti...	[more]
CB21_MAIZE	3.525e-24	60.67	Chlorophyll a-b binding protein 1, chloroplastic O...	[more]
CB22_ORYSJ	4.604e-24	60.67	Chlorophyll a-b binding protein 2, chloroplastic O...	[more]
CB23_SOYBN	7.853e-24	63.64	Chlorophyll a-b binding protein 3, chloroplastic O...	[more]
CB21_SOYBN	2.285e-23	62.50	Chlorophyll a-b binding protein, chloroplastic (Fr...	[more]
CB21_CUCSA	2.285e-23	62.50	Chlorophyll a-b binding protein of LHCII type I, c...	[more]
CB21_ORYSJ	2.984e-23	58.43	Chlorophyll a-b binding protein 1, chloroplastic O...	[more]
CB29_MAIZE	3.898e-23	58.43	Chlorophyll a-b binding protein M9, chloroplastic ...	[more]
CB21_SINAL	3.898e-23	61.45	Chlorophyll a-b binding protein 1, chloroplastic O...	[more]

BLAST of FE670633 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9M600_EUPES	1.522e-25	65.91	Chlorophyll a/b binding protein OS=Euphorbia esula...	[more]
Q9ZP08_CICAR	3.390e-25	65.17	Chlorophyll a/b binding protein OS=Cicer arietinum...	[more]
O81391_MEDSA	3.390e-25	65.17	Chlorophyll a/b binding protein OS=Medicago sativa...	[more]
Q6T705_TRIPR	9.863e-25	64.04	Chlorophyll a/b binding protein OS=Trifolium prate...	[more]
A5HSG6_ARTAN	2.870e-24	62.92	Chloroplast light-harvesting chlorophyll a/b-bindi...	[more]
A3F6K2_PEA	6.393e-24	62.92	Chloroplast chlorophyll a/b binding protein OS=Pis...	[more]
C5X7M3_SORBI	1.424e-23	61.80	Putative uncharacterized protein Sb02g032040 OS=So...	[more]
Q40771_PICAB	4.144e-23	62.64	Light harvesting chlorophyll a /b-binding protein ...	[more]
Q40247_LACSA	5.412e-23	59.55	Light-harvesting chlorophyll a/b-binding protein (...	[more]
C0PAQ4_MAIZE	7.068e-23	60.67	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of FE670633 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT2G34420.1	6.148e-25	60.23	\| Symbols: LHB1B2, LHCB1.5 \| photosystem II light ...	[more]
AT2G34430.1	6.148e-25	61.90	\| Symbols: LHB1B1, LHCB1.4 \| light-harvesting chlo...	[more]
AT1G29930.1	5.204e-24	59.09	\| Symbols: CAB1, AB140, CAB140, LHCB1.3 \| chloroph...	[more]
AT1G29920.1	5.204e-24	59.09	\| Symbols: CAB2, AB165, LHCB1.1 \| chlorophyll A/B-...	[more]
AT1G29910.1	5.204e-24	59.09	\| Symbols: CAB3, AB180, LHCB1.2 \| chlorophyll A/B ...	[more]
AT3G27690.1	3.267e-18	52.38	\| Symbols: LHCB2.4, LHCB2.3, LHCB2 \| photosystem I...	[more]
AT2G05070.1	3.267e-18	52.38	\| Symbols: LHCB2.2, LHCB2 \| photosystem II light h...	[more]
AT2G05100.1	3.267e-18	52.38	\| Symbols: LHCB2.1, LHCB2 \| photosystem II light h...	[more]
AT5G54270.1	2.862e-14	50.00	\| Symbols: LHCB3, LHCB3*1 \| light-harvesting chlor...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..23 score
None	No IPR available	GENE3D	1.10.3460.10	no description	coord: 2..66 score: 4.3
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..66 score: 1.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 9..63 score: 0.0

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE670633 ID=FE670633; Name=FE670633; organism=Cicer arietinum; type=EST; length=270bp
TGAGGAGATCTGCGCCGACAAAGAAAGTATCTCCATCGGGTATCCCATGG
TATGGTGTAGACAGTGTGTAATATATATGGCGCTTCTCTGGTGAGCCCCC
GTCTTATATGAGAGGAGAGTTTCCAGGTGTCAATGGTGGGGAGACTGCGG
GGCGCTCTGCGGAGACACAGACATTTGCGAAAAACCGTGAAATGGAGGTG
TTCCCCAGCACGTGTGCGCTGTGTGGAGCACTGGGATATGTGTTTCCACA
GCTCTTGTGTCGAAATGGTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind

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