GR395248

EST Overview
NameGR395248
Unique NameGR395248
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length732
Libraries
Library NameType
LIBEST_024780 ICC1882 PEG induced drought cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR395248 vs. TrEMBL
Match: O21165_FUSOX (Putative reverse transcriptase (Fragment) OS=Fusarium oxysporum PE=4 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.936e-89
Identity = 160/193 (82.90%), Postives = 178/193 (92.23%), Query Frame = 2
Query:  152 KSELIDAMNQCRAFRLTMDLKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVHRHSVQAAAERFSLLLGNCVRHIIDNTRYVFEDLKPETELHRINDYTHHKYKKSIPIYRTGVPQXLPLSPVAATMALGNEVNMPELV 730
            +SELI+ MNQCRAFRLTMDLKRYYL KPNGKYRPIGSPTLGSK+ISK +TDI TTIAD +RG+MQHAFRP+ GV SAA AVC+KLR+R P+DV+IEFDLKGFFNT+ R+SVQ AA RFSLLLGNCVRHIIDNTRYVFE+LKPETELH INDYTHHKYK++IPIYRTGVPQ LPLSPVAAT+AL NEVNMPE+V
Sbjct:    1 RSELIEIMNQCRAFRLTMDLKRYYLTKPNGKYRPIGSPTLGSKVISKALTDIWTTIADKRRGVMQHAFRPKLGVWSAAFAVCQKLRSRKPSDVIIEFDLKGFFNTIKRNSVQEAANRFSLLLGNCVRHIIDNTRYVFEELKPETELHIINDYTHHKYKRAIPIYRTGVPQGLPLSPVAATIALENEVNMPEMV 193          
BLAST of GR395248 vs. TrEMBL
Match: Q9XNK4_FUSOX (Reverse transcriptase OS=Fusarium oxysporum f. sp. matthiolae PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.272e-35
Identity = 89/231 (38.53%), Postives = 131/231 (56.71%), Query Frame = 2
Query:    8 IKQALLKGEVEKAVIIWLCLLKLSKANQILLYTKVKKQ*YIKENKQVVKSELIDAMNQCRAFRLTMDLKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVHRHSVQAAAERFSLLLGNCVRHIIDNTRYVFEDLKPETELHRINDYTHHKYKKSIPIYRTGVPQXLPLSPVAATMAL 700
            I  A+ +GE+ KAV++WLCL+K+S++ QILL+ +V K  Y + +   V+  +  AMN+ RA+ + + + R+Y+ K NGK RPIG+P   S+MISK +TD+  T+ +  R   QH +  ++G  SA L    KL+         EFDLK FFNTV         E     L   + ++I    Y F +L PE+EL       + K K+   + RTGVPQ L LSP+ +T AL
Sbjct:   71 IVTAVEQGEIRKAVLVWLCLMKISRSYQILLFNRVCKGWYWRWSSARVEEVIFGAMNKMRAWDMKLLIHRFYILKKNGKMRPIGAPNYESRMISKALTDLLYTVTEKSRSAEQHGYMKKRGAWSAILECLSKLKEGY---AGYEFDLKSFFNTVEPFIYFRKLEEVDKKLTKVISNVIKGIEYRFTELLPESEL-------NPKGKRKNTLVRTGVPQGLSLSPLLSTWAL 291          
BLAST of GR395248 vs. TrEMBL
Match: Q9XNK5_FUSOX (Reverse transcriptase OS=Fusarium oxysporum f. sp. raphani PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.375e-33
Identity = 87/231 (37.66%), Postives = 129/231 (55.84%), Query Frame = 2
Query:    8 IKQALLKGEVEKAVIIWLCLLKLSKANQILLYTKVKKQ*YIKENKQVVKSELIDAMNQCRAFRLTMDLKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVHRHSVQAAAERFSLLLGNCVRHIIDNTRYVFEDLKPETELHRINDYTHHKYKKSIPIYRTGVPQXLPLSPVAATMAL 700
            I  A+  GE+ KAV++WLCL+K+S++ QILL+ +V K  Y + +   V+  +  AMN+ R++ + + + R+Y+ K NGK RPIG+P   S+MISK +TD+  +I +  R   QH +  ++G  SA L    KL+         EFDLK FFNTV         E     L   + ++I    Y F +L PE+EL       + K  +   + RTGVPQ L LSP+ +T AL
Sbjct:   71 IVSAIEAGEIRKAVLVWLCLMKVSRSYQILLFNRVCKGWYWRWSTARVEEIIFGAMNKMRSWDMKLLIHRFYILKKNGKMRPIGAPNYESRMISKALTDMLYSITEKSRSAEQHGYMKKRGAWSAILECLSKLKEGY---AGYEFDLKSFFNTVEPFIYFRKLEEVDKKLTKLISNVIKGIEYRFSELLPESEL-------NPKANRKNTLERTGVPQGLSLSPLLSTWAL 291          
BLAST of GR395248 vs. TrEMBL
Match: O21164_FUSOX (Putative reverse transcriptase OS=Fusarium oxysporum PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.249e-18
Identity = 61/160 (38.12%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  221 YLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVHRHSVQAAAERFSLLLGNCVRHIIDNTRYVFEDLKPETELHRINDYTHHKYKKSIPIYRTGVPQXLPLSPVAATMAL 700
            Y+ K NGK RPIG+P   S+MISK +TD+  +I +  R   QH +  ++G  SA L    KL+         EFDLK FFNTV         E     L   + ++I    Y F +L PE+EL       + K  +   + RTGVPQ L LSP+ +T AL
Sbjct:   12 YILKKNGKMRPIGAPNYESRMISKALTDMLYSITEKSRSAEQHGYMKKRGAWSAILECLSKLKEGY---AGYEFDLKSFFNTVEPFIYFRKLEEVDKKLTKLISNVIKGIEYRFSELLPESEL-------NPKANRKNTLERTGVPQGLSLSPLLSTWAL 161          
BLAST of GR395248 vs. TrEMBL
Match: C1EP41_BACC3 (Reverse transcriptase/endonuclease protein OS=Bacillus cereus (strain 03BB102) GN=BCA_3916 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.084e-9
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  209 LKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVH 472
            ++R ++ KPNGK RP+G PT+  ++I ++   +   I + K     + FRP++G    ALA C  + N S    V++ D+KGFF+ V+
Sbjct:   93 VRRLFISKPNGKMRPLGIPTIEDRLIQQMFQQVLEPIVEGKFHPQSYGFRPKRGT-HDALARCYHMVNHSHQHFVVDIDIKGFFDNVN 179          
BLAST of GR395248 vs. TrEMBL
Match: A0RHJ0_BACAH (Reverse transcriptase/endonuclease protein OS=Bacillus thuringiensis (strain Al Hakam) GN=BALH_3447 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.084e-9
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  209 LKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVH 472
            ++R ++ KPNGK RP+G PT+  ++I ++   +   I + K     + FRP++G    ALA C  + N S    V++ D+KGFF+ V+
Sbjct:   97 VRRLFISKPNGKMRPLGIPTIEDRLIQQMFQQVLEPIVEGKFHPQSYGFRPKRGT-HDALARCYHMVNHSHQHFVVDIDIKGFFDNVN 183          
BLAST of GR395248 vs. TrEMBL
Match: C2NLM1_BACCE (Reverse transcriptase/endonuclease protein OS=Bacillus cereus BGSC 6E1 GN=bcere0004_36030 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.084e-9
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  209 LKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVH 472
            ++R ++ KPNGK RP+G PT+  ++I ++   +   I + K     + FRP++G    ALA C  + N S    V++ D+KGFF+ V+
Sbjct:   93 VRRLFISKPNGKMRPLGIPTIEDRLIQQMFQQVLEPIVEGKFHPQSYGFRPKRGT-HDALARCYHMVNHSHQHFVVDIDIKGFFDNVN 179          
BLAST of GR395248 vs. TrEMBL
Match: B3ZMX9_BACCE (Reverse transcriptase/endonuclease protein OS=Bacillus cereus 03BB108 GN=BC03BB108_3742 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.084e-9
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  209 LKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVH 472
            ++R ++ KPNGK RP+G PT+  ++I ++   +   I + K     + FRP++G    ALA C  + N S    V++ D+KGFF+ V+
Sbjct:   93 VRRLFISKPNGKMRPLGIPTIEDRLIQQMFQQVLEPIVEGKFHPQSYGFRPKRGT-HDALARCYHMVNHSHQHFVVDIDIKGFFDNVN 179          
BLAST of GR395248 vs. TrEMBL
Match: Q9MEH5_TRIHA (ORF1 OS=Trichoderma harzianum PE=4 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 4.028e-9
Identity = 51/154 (33.12%), Postives = 71/154 (46.10%), Query Frame = 2
Query:    8 IKQALLKGEVEKAVIIWLCLLKLSKANQILLYTKVKKQ*YIKENKQVVKSELIDAMNQCRAFRLTMDLKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTV 469
            I+ A+ KG+  KA  I    +K SK  ++  +  V K  Y K  +  V              +  +D KR Y+ K NGK RP+G PT+  +++  +       I  NK    QHA+ P KG  SA   V  K++       V E DLKGFFN V
Sbjct:   91 IRNAVSKGDYSKAWKIASDNIKHSKCFRMTAFNFVCKGWYYKMAQSEVYKLNRRVQRIIEDEKSNLDYKRVYIPKTNGKLRPLGVPTVEWRIVLHLFNGFFVEILRNKLLTSQHAYVPLKGTMSAWREVIAKIQRYR---FVFETDLKGFFNEV 241          
BLAST of GR395248 vs. TrEMBL
Match: Q732Q3_BACC1 (Reverse transcriptase/endonuclease protein OS=Bacillus cereus (strain ATCC 10987) GN=BCE_3857 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.611e-8
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 2
Query:  209 LKRYYLEKPNGKYRPIGSPTLGSKMISKVITDI*TTIADNKRGMMQHAFRPRKGV*SAALAVCEKLRNRSPTDVVIEFDLKGFFNTVH 472
            ++R ++ KPNGK RP+G PT+  ++I ++   I   I + K     + FRP++     ALA C  + N S    V++ D+KGFF+ V+
Sbjct:   93 VRRVFIPKPNGKMRPLGIPTIEDRLIQQMFLQILEPIVEAKFHPQSYGFRPKRST-HDALARCYHMVNHSHQHFVVDIDIKGFFDNVN 179          
The following BLAST results are available for this feature:
BLAST of GR395248 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
O21165_FUSOX3.936e-8982.90Putative reverse transcriptase (Fragment) OS=Fusar... [more]
Q9XNK4_FUSOX3.272e-3538.53Reverse transcriptase OS=Fusarium oxysporum f. sp.... [more]
Q9XNK5_FUSOX1.375e-3337.66Reverse transcriptase OS=Fusarium oxysporum f. sp.... [more]
O21164_FUSOX1.249e-1838.13Putative reverse transcriptase OS=Fusarium oxyspor... [more]
C1EP41_BACC33.084e-935.23Reverse transcriptase/endonuclease protein OS=Baci... [more]
A0RHJ0_BACAH3.084e-935.23Reverse transcriptase/endonuclease protein OS=Baci... [more]
C2NLM1_BACCE3.084e-935.23Reverse transcriptase/endonuclease protein OS=Baci... [more]
B3ZMX9_BACCE3.084e-935.23Reverse transcriptase/endonuclease protein OS=Baci... [more]
Q9MEH5_TRIHA4.028e-933.12ORF1 OS=Trichoderma harzianum PE=4 SV=2[more]
Q732Q3_BACC12.611e-835.23Reverse transcriptase/endonuclease protein OS=Baci... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR395248 ID=GR395248; Name=GR395248; organism=Cicer arietinum; type=EST; length=732bp
GCGGGGAATCAAACAAGCCCTTTTGAAAGGGGAGGTGGAGAAAGCTGTTA
TTATATGGCTTTGTCTACTAAAACTTTCAAAAGCAAATCAAATATTACTT
TACACTAAGGTGAAAAAGCAATGATACATAAAGGAGAACAAACAGGTCGT
CAAATCTGAACTGATAGATGCGATGAACCAGTGTCGTGCCTTTAGATTAA
CCATGGATCTTAAGCGTTATTACTTAGAGAAACCCAATGGGAAATATAGA
CCCATTGGATCTCCGACTCTAGGGAGCAAAATGATATCTAAAGTCATAAC
AGACATTTGAACAACGATAGCAGATAATAAGCGTGGAATGATGCAGCATG
CTTTTAGACCGCGAAAGGGTGTTTGAAGCGCGGCTTTGGCTGTCTGTGAG
AAGCTGCGAAACAGATCACCAACAGACGTGGTCATAGAATTCGATCTGAA
AGGTTTCTTTAACACGGTTCACAGACATAGTGTTCAAGCAGCGGCAGAAA
GATTCTCGCTATTATTGGGAAATTGTGTGAGACATATCATTGACAATACT
AGATATGTGTTTGAGGATCTCAAGCCCGAGACGGAATTACATCGTATTAA
TGATTATACACATCATAAGTACAAAAAGAGTATTCCGATTTATCGGACTG
GAGTGCCACAGGNTCTTCCTCTATCACCCGTCGCAGCGACCATGGCCCTT
GGGAACGAGGTAAATATGCCAGAATTGGTGTT
back to top